Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0217400-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:6224187:6227225:1 gene:Os12g0217400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os12t0217400-00)
Sequence	ATGTCATCGTCCACCAAGAGAGTTGCTCACCATCTTCCGTCATTGCTGCTAACCGCGATG TACATTCTCCTCCAAGTCCAGGCCACCACCAATACGGCACGCACCGTAGTACCACCGGTT CGGTGTCATCCGGATCAAGCCTCAGCGCTGCTCCGGCTGAAGCACTCCTTCAACGCGACC GCCGGCGACTACTCCACTGCCTTCCAGTCATGGGTCGCCGGCACAGACTGCTGCCGCTGG GATGGCGTCGGCTGCGGTGGCGCAGATGGCCGTGTCACCTCACTCGACCTGGGCGGCCAC CAATTGCAAGCCGGCAGCGTCGACCCTGCATTGTTCAGGTTAACCTCACTCAAGCACCTT AACCTCTCCGGTAACGACTTCAGCATGTCCCAGCTCCCGGTGATCACCGGATTCGAGCAG CTCACCGAACTGGTTTATCTTGATCTCTCCGACACCAACATAGCGGGCGAGGTGCCAGGT AGCATCGGCCGCCTTACGAACCTGGTCTACCTCGACCTCTCCACCAGTTTCTATATCGTC GAATACAACGATGACGAGCAGGTGACATTCGACTCAGACTCAGTTTGGCAGCTCTCAGCG CCAAACATGGAGACCTTGATTGAAAACCACAGCAACCTGGAGGAGCTCCATATGGGAATG GTGGATCTGTCCGGCAATGGAGAACGATGGTGTGACAACATAGCCAAATATACACCAAAG CTTCAGGTTCTAAGTTTACCTTATTGCTCACTGTCAGGTCCCATCTGTGCATCATTCTCT GCCTTGCAAGCACTCACTATGATCGAGCTTCACTATAATCACTTGTCAGGTTCAGTGCCA GAGTTCTTGGCTGGCTTCTCCAATCTCACTGTTCTTCAGCTATCCAAAAACAAGTTTCAA GGATCGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGAGAACGATCAACCTCTCCAAG AATCCTGGCATATCTGGTAATCTGCCAAATTTCTCACAGGACACTAGCTTGGAGAATCTG TTCCTCAATAACACAAACTTCACAGGTACGATTCCTGGTTCCATCATCAATCTCATATCT GTTAAGAAGTTAGACCTTGGTGCAAGTGGCTTCTCTGGATCACTGCCCTCTTCGTTAGGC AGTCTCAAATACTTGGATATGCTACAACTGTCTGGATTACAGCTAGTAGGAACCATTCCG TCGTGGATCTCAAATCTAACTTCTCTCACCGTTCTCCGGATCTCTAACTGTGGATTGTCT GGACCAGTGCCTTCTTCAATAGGAAACTTAAGGGAATTGACCACATTAGCATTGTACAAC TGCAACTTTTCAGGGACGGTTCATCCACAGATCTTAAATTTGACGCGGCTACAAACTCTC CTGCTCCATTCGAACAATTTTGCTGGCACGGTGGATCTCACCTCATTCTCAAAACTGAAA AACCTAACTTTCCTGAATCTCTCAAACAATAAACTACTTGTGGTAGAAGGAAAAAATAGT TCATCACTGGTATTGTTCCCCAAACTACAATTACTAAGTTTAGCATCTTGCAGCATGACA ACCTTCCCAAATATCTTGAGAGACCTTCCTGACATCACTAGCCTTGACCTTTCCAATAAC CAAATCCAGGGAGCTATACCTCAGTGGGCATGGAAAACATGGAAAGGCTTGCAGTTTATC GTCCTGAACATATCTCACAATAACTTTACGAGCCTCGGATCTGATCCTTTTCTGCCTCTT TATGTGGAATACTTCGATCTCAGTTTCAACAGCATTGAAGGGCCCATACCTATACCACAA GAAGGTAGTAGCACGTTAGATTACTCAAGCAACCAGTTCTCATCCATGCCTCTTCGTTAC TCGACTTACCTTGGTGAAACTGTGACTTTCAAGGCGTCCAAAAACAAACTTTCTGGGAAT GTTCCACCGTTGATCTGCACCACTGCTAGGAAACTGCAACTCATCGATCTATCTTATAAT AACTTGAGTGGCTCAATCCCATCTTGTTTATTGGAGAGTTTCAGCGAACTACAAGTATTA AGTCTGAAAGCAAATAAATTTGTTGGAAAATTACCTGATATTATCAAGGAAGGTTGTGCA CTTGAGGCATTGGACTTAAGTGACAATTCGATTGAAGGGAAGATACCCCGATCTCTAGTT TCCTGCAGAAACTTGGAGATCCTCGACATTGGAAGCAATCAGATCAGTGACTCTTTCCCA TGTTGGCTTAGTCAACTTCCTAAACTTCAGGTCCTTGTCCTCAAATCTAATAAGTTGACT GGTCAAGTAATGGACCCTTCATACACAGGACGTCAAATCAGCTGTGAATTTCCAGCACTC AGAATTGCTGATATGGCATCAAATAACTTAAATGGAATGCTGATGGAAGGATGGTTTAAG ATGCTCAAGTCCATGATGGCCAGGTCTGATAATGACACGTTAGTCATGGAAAATCAATAT TACCATGGGCAGACATACCAGTTTACCGCTACAGTTACATACAAAGGGAATGACAGGACA ATTTCCAAGATCTTGAGAAGCCTTGTGCTAATCGATGTCTCCGGTAACGCATTCCATGGT GCCATCCCAGATACCATTGGTGAACTTGTTCTGCTTCGTGGGCTTAACCTGTCACACAAT GCCCTTACAGGGCCAATTCCATCACAGTTTTGCAGGTTAGATCAACTTGAGTCATTGGAC CTCTCTTTCAATGAGCTTTCTGGAGAGATCCCCAAGGAACTAGCATCACTGAATTTTCTT TCGACGTTGAACTTGTCGAACAACACGTTGGTTGGAAGAATACCAGACTCATATCAGTTT TCCACATTTTCCAATAGCTCTTTTTTGGGAAACACAGGTTTGTGTGGACTACCGTTATCT AGACAATGTGACAACCCTGAAGAGCCAAGCGCTATACCATACACTTCAGAGAAATCCATA GATGCTGTACTTCTCCTCTTCACTGCATTGGGATTTGGCATTTCTTTTGCAATGACTATC TTGATTGTATGGGGAAGCCACATGAGAAAACGACACTGA

Peptide Sequence

PEP ID	Os12t0217400-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:6224187:6227225:1 gene:Os12g0217400 transcript:Os12t0217400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os12t0217400-00)
Sequence	MSSSTKRVAHHLPSLLLTAMYILLQVQATTNTARTVVPPVRCHPDQASALLRLKHSFNAT AGDYSTAFQSWVAGTDCCRWDGVGCGGADGRVTSLDLGGHQLQAGSVDPALFRLTSLKHL NLSGNDFSMSQLPVITGFEQLTELVYLDLSDTNIAGEVPGSIGRLTNLVYLDLSTSFYIV EYNDDEQVTFDSDSVWQLSAPNMETLIENHSNLEELHMGMVDLSGNGERWCDNIAKYTPK LQVLSLPYCSLSGPICASFSALQALTMIELHYNHLSGSVPEFLAGFSNLTVLQLSKNKFQ GSFPPIIFQHKKLRTINLSKNPGISGNLPNFSQDTSLENLFLNNTNFTGTIPGSIINLIS VKKLDLGASGFSGSLPSSLGSLKYLDMLQLSGLQLVGTIPSWISNLTSLTVLRISNCGLS GPVPSSIGNLRELTTLALYNCNFSGTVHPQILNLTRLQTLLLHSNNFAGTVDLTSFSKLK NLTFLNLSNNKLLVVEGKNSSSLVLFPKLQLLSLASCSMTTFPNILRDLPDITSLDLSNN QIQGAIPQWAWKTWKGLQFIVLNISHNNFTSLGSDPFLPLYVEYFDLSFNSIEGPIPIPQ EGSSTLDYSSNQFSSMPLRYSTYLGETVTFKASKNKLSGNVPPLICTTARKLQLIDLSYN NLSGSIPSCLLESFSELQVLSLKANKFVGKLPDIIKEGCALEALDLSDNSIEGKIPRSLV SCRNLEILDIGSNQISDSFPCWLSQLPKLQVLVLKSNKLTGQVMDPSYTGRQISCEFPAL RIADMASNNLNGMLMEGWFKMLKSMMARSDNDTLVMENQYYHGQTYQFTATVTYKGNDRT ISKILRSLVLIDVSGNAFHGAIPDTIGELVLLRGLNLSHNALTGPIPSQFCRLDQLESLD LSFNELSGEIPKELASLNFLSTLNLSNNTLVGRIPDSYQFSTFSNSSFLGNTGLCGLPLS RQCDNPEEPSAIPYTSEKSIDAVLLLFTALGFGISFAMTILIVWGSHMRKRH

Transcript Sequence

Transcript ID	Os12t0217400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:6224187:6227225:1 gene:Os12g0217400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os12t0217400-00)
Sequence	ATGTCATCGTCCACCAAGAGAGTTGCTCACCATCTTCCGTCATTGCTGCTAACCGCGATG TACATTCTCCTCCAAGTCCAGGCCACCACCAATACGGCACGCACCGTAGTACCACCGGTT CGGTGTCATCCGGATCAAGCCTCAGCGCTGCTCCGGCTGAAGCACTCCTTCAACGCGACC GCCGGCGACTACTCCACTGCCTTCCAGTCATGGGTCGCCGGCACAGACTGCTGCCGCTGG GATGGCGTCGGCTGCGGTGGCGCAGATGGCCGTGTCACCTCACTCGACCTGGGCGGCCAC CAATTGCAAGCCGGCAGCGTCGACCCTGCATTGTTCAGGTTAACCTCACTCAAGCACCTT AACCTCTCCGGTAACGACTTCAGCATGTCCCAGCTCCCGGTGATCACCGGATTCGAGCAG CTCACCGAACTGGTTTATCTTGATCTCTCCGACACCAACATAGCGGGCGAGGTGCCAGGT AGCATCGGCCGCCTTACGAACCTGGTCTACCTCGACCTCTCCACCAGTTTCTATATCGTC GAATACAACGATGACGAGCAGGTGACATTCGACTCAGACTCAGTTTGGCAGCTCTCAGCG CCAAACATGGAGACCTTGATTGAAAACCACAGCAACCTGGAGGAGCTCCATATGGGAATG GTGGATCTGTCCGGCAATGGAGAACGATGGTGTGACAACATAGCCAAATATACACCAAAG CTTCAGGTTCTAAGTTTACCTTATTGCTCACTGTCAGGTCCCATCTGTGCATCATTCTCT GCCTTGCAAGCACTCACTATGATCGAGCTTCACTATAATCACTTGTCAGGTTCAGTGCCA GAGTTCTTGGCTGGCTTCTCCAATCTCACTGTTCTTCAGCTATCCAAAAACAAGTTTCAA GGATCGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGAGAACGATCAACCTCTCCAAG AATCCTGGCATATCTGGTAATCTGCCAAATTTCTCACAGGACACTAGCTTGGAGAATCTG TTCCTCAATAACACAAACTTCACAGGTACGATTCCTGGTTCCATCATCAATCTCATATCT GTTAAGAAGTTAGACCTTGGTGCAAGTGGCTTCTCTGGATCACTGCCCTCTTCGTTAGGC AGTCTCAAATACTTGGATATGCTACAACTGTCTGGATTACAGCTAGTAGGAACCATTCCG TCGTGGATCTCAAATCTAACTTCTCTCACCGTTCTCCGGATCTCTAACTGTGGATTGTCT GGACCAGTGCCTTCTTCAATAGGAAACTTAAGGGAATTGACCACATTAGCATTGTACAAC TGCAACTTTTCAGGGACGGTTCATCCACAGATCTTAAATTTGACGCGGCTACAAACTCTC CTGCTCCATTCGAACAATTTTGCTGGCACGGTGGATCTCACCTCATTCTCAAAACTGAAA AACCTAACTTTCCTGAATCTCTCAAACAATAAACTACTTGTGGTAGAAGGAAAAAATAGT TCATCACTGGTATTGTTCCCCAAACTACAATTACTAAGTTTAGCATCTTGCAGCATGACA ACCTTCCCAAATATCTTGAGAGACCTTCCTGACATCACTAGCCTTGACCTTTCCAATAAC CAAATCCAGGGAGCTATACCTCAGTGGGCATGGAAAACATGGAAAGGCTTGCAGTTTATC GTCCTGAACATATCTCACAATAACTTTACGAGCCTCGGATCTGATCCTTTTCTGCCTCTT TATGTGGAATACTTCGATCTCAGTTTCAACAGCATTGAAGGGCCCATACCTATACCACAA GAAGGTAGTAGCACGTTAGATTACTCAAGCAACCAGTTCTCATCCATGCCTCTTCGTTAC TCGACTTACCTTGGTGAAACTGTGACTTTCAAGGCGTCCAAAAACAAACTTTCTGGGAAT GTTCCACCGTTGATCTGCACCACTGCTAGGAAACTGCAACTCATCGATCTATCTTATAAT AACTTGAGTGGCTCAATCCCATCTTGTTTATTGGAGAGTTTCAGCGAACTACAAGTATTA AGTCTGAAAGCAAATAAATTTGTTGGAAAATTACCTGATATTATCAAGGAAGGTTGTGCA CTTGAGGCATTGGACTTAAGTGACAATTCGATTGAAGGGAAGATACCCCGATCTCTAGTT TCCTGCAGAAACTTGGAGATCCTCGACATTGGAAGCAATCAGATCAGTGACTCTTTCCCA TGTTGGCTTAGTCAACTTCCTAAACTTCAGGTCCTTGTCCTCAAATCTAATAAGTTGACT GGTCAAGTAATGGACCCTTCATACACAGGACGTCAAATCAGCTGTGAATTTCCAGCACTC AGAATTGCTGATATGGCATCAAATAACTTAAATGGAATGCTGATGGAAGGATGGTTTAAG ATGCTCAAGTCCATGATGGCCAGGTCTGATAATGACACGTTAGTCATGGAAAATCAATAT TACCATGGGCAGACATACCAGTTTACCGCTACAGTTACATACAAAGGGAATGACAGGACA ATTTCCAAGATCTTGAGAAGCCTTGTGCTAATCGATGTCTCCGGTAACGCATTCCATGGT GCCATCCCAGATACCATTGGTGAACTTGTTCTGCTTCGTGGGCTTAACCTGTCACACAAT GCCCTTACAGGGCCAATTCCATCACAGTTTTGCAGGTTAGATCAACTTGAGTCATTGGAC CTCTCTTTCAATGAGCTTTCTGGAGAGATCCCCAAGGAACTAGCATCACTGAATTTTCTT TCGACGTTGAACTTGTCGAACAACACGTTGGTTGGAAGAATACCAGACTCATATCAGTTT TCCACATTTTCCAATAGCTCTTTTTTGGGAAACACAGGTTTGTGTGGACTACCGTTATCT AGACAATGTGACAACCCTGAAGAGCCAAGCGCTATACCATACACTTCAGAGAAATCCATA GATGCTGTACTTCTCCTCTTCACTGCATTGGGATTTGGCATTTCTTTTGCAATGACTATC TTGATTGTATGGGGAAGCCACATGAGAAAACGACACTGA