Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0215950-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:6138572:6141905:-1 gene:Os12g0215950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os12t0215950-01)
Sequence	TCGTCCACCAAGAGGCTGGTTCGTCCTCACCATCTCGCGAAACCATTGCTTACCATGCTG CACATCCTCCTGCAAGTCCAGGCCATCGCCGCGCTCACCGACGATGCGACGGCACCGGTA ATTCAGTGCCTCCCGGACCAGGCCTCCGCGCTGCTCCGGCTGAAGAACTCCTTCAACAAG ACGGCGGGCGGCTACTCCACTGCATTTCGGTCGTGGATCACCGGCACAGATTGCTGCCAC TGGGACGGCGTCGACTGCGGTGGCGGCGAAGATGGCCGTGTCACCTCGCTCGTCTTGGGT GGCCACAACCTGCAAGCCGGCAGCATCAGCCCTGCACTCTTCAGGTTAACCTCACTCAGG TACCTTGACATCTCTGGTAACAACTTCAGCATGTCCCAGCTCCCGGTAACCGGGTTCGAG AATCTCACCGAGCTCACCCATCTTGACCTCTCTGACACCAACATCGCCGGTGAGGTGCCG GCTGGCATCGGAAGCCTTGTGAACTTGGTGTACCTTGACCTCTCCACAAGCTTCTACATC ATTTATTATGATGACGAGAACAAGATGATGCCGTTCGCTTCAGACAACTTCTGGCAGCTC TCAGTGCCAAACATGGAGACCTTGCTGGCAAACCTTACCAACCTGGAGGAGCTCCATATG GGAATGGTGGATATGTCCGGCAACGGCGAACGGTGGTGTGACGACATAGCTAAGTTTACA CCTAAGCTTCAGGTTCTAAGTTTACCTTACTGCTCATTGTCAGGTCCCATCTGCACATCC TTGTCTTCCATGAATTCGCTCACTAGGATTGAGCTTCATTACAACCACTTGTCAGGTTCA GTGCCAGAGTTCTTGGCTGGCTTTTCCAACCTCACTGTTCTTCAACTGTCCAAAAACAAG TTTGAAGGATTGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGGTAACAATTAACATC ACTAATAATCCTGGGTTATCAGGTAGTCTGCCCAATTTCTCACAGGACAGTAAGTTAGAG AATCTTCTTATCAGTAGCACGAACTTCACAGGTATAATACCGAGTTCCATAAGCAATCTC AAATCTCTTACGAAGCTGGACCTTGGTGCCAGTGGCTTCTCTGGAATGCTGCCCTCTTCA CTAGGTAGCCTCAAATACCTGGATTTGCTAGAAGTGTCTGGGATACAGCTAACAGGATCC ATGGCACCGTGGATATCAAACCTAACTTCTCTTACTGTTCTCAAGTTCTCTGACTGTGGA TTGTCTGGAGAGATACCTTCCTCAATAGGAAACTTAAAGAAATTGAGTATGTTAGCATTG TACAACTGCAAGTTTTCAGGGAAGGTGCCTCCGCAGATCTTTAATTTGACTCAGTTGCAA TCTCTGCAACTCCATTCGAACAATTTGGCTGGCACGGTGGAACTCACGTCATTCACAAAA CTGAAAAACCTATCTGTCCTGAATCTCTCAAACAATAAACTACTTGTGCTACATGGAGAA AACAGTTCATCGTTGGTGCCCTTCCCAAAAATAAAACTCTTAAGGTTAGCATCTTGCAGT ATATCAACCTTTCCCAACATCTTGAAGCATCTCCATGAGATCACCACTCTTGACCTTTCG CATAACAAAATCCAGGGAGCTATACCTCAGTGGGCATGGGAGACATGGAGAGGCATGTAC TTTCTCCTCCTGAACATATCACACAATAACATTACAAGTCTTGGATCAGATCCTCTGCTT CCTCTTGAGATTGACTTCTTTGATCTCAGTTTCAACAGCATTGAAGGGCCCATACCTGTA CCACAAGAAGGTAGTACCATGTTAGATTATTCAAGCAACCAGTTCTCCTCCATGCCTCTT CATTACTCAACTTACCTTGGTGAAACTTTTACTTTCAAGGCTTCCAAAAACAAACTGTCT GGAAATATTCCATCAATCTGTAGTGCTCCGAGACTACAACTCATTGATCTCTCTTACAAT AACTTGAGTGGTTCGATCCCATCTTGTTTAATGGAGGATGTCACTGCATTACAAATATTA AATCTGAAGGAAAATAAACTTGTTGGAACAATACCAGATAACATCAAGGAAGGTTGTGCA CTTGAGGCAATAGATTTAAGTGGCAATTTGTTTGAGGGGAGGATACCCAGATCTCTAGTT GCTTGCAGGAACTTGGAGATCCTCGACATTGGAAACAATGAGATTAGTGACTCCTTCCCA TGTTGGATGAGCAAACTTCCTAAACTTCAAGTCCTTGCCCTCAAGTCTAACAAGTTCACT GGACAAATAATGGATCCTTCATATACAGTTGATGGAAACAGTTGTGAATTTACAGAGCTC AGAATTGCCGATATGGCCTCAAATAACTTCAATGGAACATTGCCAGAAGCATGGTTTACG ATGCTCAAGTCCATGAATGCCATATCTGATAATGATACATTAGTCATGGAAAATCAATAT TACCATGGGCAAACATACCAGTTTACTGCTGCAGTTACATACAAAGGGAATTACATCACA ATTTCCAAGATCTTGAGGACCCTTGTGCTGATTGATTTCTCGAATAATGCATTCCATGGC ACCATTCCTGAGACTATCGGGGAGCTTGTTCTGCTTCATGGGCTCAACATGTCTCACAAT TCACTAACAGGACCAATTCCAACTCAGTTTGGCAGGCTGAATCAACTTGAGTCACTGGAC CTCTCCTCAAATGAGCTCTTTGGTGAAATTCCCAAGGAGCTAGCATCACTCAACTTCCTT TCAATACTGAATTTGTCTTATAACACGTTGGTTGGAAGAATACCAAATTCATATCAGTTT TCCACATTTTCGAACAACTCTTTTCTTGGAAACACTGGTTTGTGTGGACCGCCATTATCT AAACAATGTGATAACCCACAAGAGTCAACTGTGATGCCATATGTTTCGGAGAAATCCATA GATGTTCTACTAGTCCTCTTCACTGCATTGGGTTTTGGTGTTTCCTTTGCAATTACAATC CTAATTGTATGGGGAAGGCATATGAAAAAACAGCGATGA

Peptide Sequence

PEP ID	Os12t0215950-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:6138572:6141905:-1 gene:Os12g0215950 transcript:Os12t0215950-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os12t0215950-01)
Sequence	SSTKRLVRPHHLAKPLLTMLHILLQVQAIAALTDDATAPVIQCLPDQASALLRLKNSFNK TAGGYSTAFRSWITGTDCCHWDGVDCGGGEDGRVTSLVLGGHNLQAGSISPALFRLTSLR YLDISGNNFSMSQLPVTGFENLTELTHLDLSDTNIAGEVPAGIGSLVNLVYLDLSTSFYI IYYDDENKMMPFASDNFWQLSVPNMETLLANLTNLEELHMGMVDMSGNGERWCDDIAKFT PKLQVLSLPYCSLSGPICTSLSSMNSLTRIELHYNHLSGSVPEFLAGFSNLTVLQLSKNK FEGLFPPIIFQHKKLVTINITNNPGLSGSLPNFSQDSKLENLLISSTNFTGIIPSSISNL KSLTKLDLGASGFSGMLPSSLGSLKYLDLLEVSGIQLTGSMAPWISNLTSLTVLKFSDCG LSGEIPSSIGNLKKLSMLALYNCKFSGKVPPQIFNLTQLQSLQLHSNNLAGTVELTSFTK LKNLSVLNLSNNKLLVLHGENSSSLVPFPKIKLLRLASCSISTFPNILKHLHEITTLDLS HNKIQGAIPQWAWETWRGMYFLLLNISHNNITSLGSDPLLPLEIDFFDLSFNSIEGPIPV PQEGSTMLDYSSNQFSSMPLHYSTYLGETFTFKASKNKLSGNIPSICSAPRLQLIDLSYN NLSGSIPSCLMEDVTALQILNLKENKLVGTIPDNIKEGCALEAIDLSGNLFEGRIPRSLV ACRNLEILDIGNNEISDSFPCWMSKLPKLQVLALKSNKFTGQIMDPSYTVDGNSCEFTEL RIADMASNNFNGTLPEAWFTMLKSMNAISDNDTLVMENQYYHGQTYQFTAAVTYKGNYIT ISKILRTLVLIDFSNNAFHGTIPETIGELVLLHGLNMSHNSLTGPIPTQFGRLNQLESLD LSSNELFGEIPKELASLNFLSILNLSYNTLVGRIPNSYQFSTFSNNSFLGNTGLCGPPLS KQCDNPQESTVMPYVSEKSIDVLLVLFTALGFGVSFAITILIVWGRHMKKQR

Transcript Sequence

Transcript ID	Os12t0215950-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:6138572:6141905:-1 gene:Os12g0215950 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os12t0215950-01)
Sequence	GTCGTCCACCAAGAGGCTGGTTCGTCCTCACCATCTCGCGAAACCATTGCTTACCATGCT GCACATCCTCCTGCAAGTCCAGGCCATCGCCGCGCTCACCGACGATGCGACGGCACCGGT AATTCAGTGCCTCCCGGACCAGGCCTCCGCGCTGCTCCGGCTGAAGAACTCCTTCAACAA GACGGCGGGCGGCTACTCCACTGCATTTCGGTCGTGGATCACCGGCACAGATTGCTGCCA CTGGGACGGCGTCGACTGCGGTGGCGGCGAAGATGGCCGTGTCACCTCGCTCGTCTTGGG TGGCCACAACCTGCAAGCCGGCAGCATCAGCCCTGCACTCTTCAGGTTAACCTCACTCAG GTACCTTGACATCTCTGGTAACAACTTCAGCATGTCCCAGCTCCCGGTAACCGGGTTCGA GAATCTCACCGAGCTCACCCATCTTGACCTCTCTGACACCAACATCGCCGGTGAGGTGCC GGCTGGCATCGGAAGCCTTGTGAACTTGGTGTACCTTGACCTCTCCACAAGCTTCTACAT CATTTATTATGATGACGAGAACAAGATGATGCCGTTCGCTTCAGACAACTTCTGGCAGCT CTCAGTGCCAAACATGGAGACCTTGCTGGCAAACCTTACCAACCTGGAGGAGCTCCATAT GGGAATGGTGGATATGTCCGGCAACGGCGAACGGTGGTGTGACGACATAGCTAAGTTTAC ACCTAAGCTTCAGGTTCTAAGTTTACCTTACTGCTCATTGTCAGGTCCCATCTGCACATC CTTGTCTTCCATGAATTCGCTCACTAGGATTGAGCTTCATTACAACCACTTGTCAGGTTC AGTGCCAGAGTTCTTGGCTGGCTTTTCCAACCTCACTGTTCTTCAACTGTCCAAAAACAA GTTTGAAGGATTGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGGTAACAATTAACAT CACTAATAATCCTGGGTTATCAGGTAGTCTGCCCAATTTCTCACAGGACAGTAAGTTAGA GAATCTTCTTATCAGTAGCACGAACTTCACAGGTATAATACCGAGTTCCATAAGCAATCT CAAATCTCTTACGAAGCTGGACCTTGGTGCCAGTGGCTTCTCTGGAATGCTGCCCTCTTC ACTAGGTAGCCTCAAATACCTGGATTTGCTAGAAGTGTCTGGGATACAGCTAACAGGATC CATGGCACCGTGGATATCAAACCTAACTTCTCTTACTGTTCTCAAGTTCTCTGACTGTGG ATTGTCTGGAGAGATACCTTCCTCAATAGGAAACTTAAAGAAATTGAGTATGTTAGCATT GTACAACTGCAAGTTTTCAGGGAAGGTGCCTCCGCAGATCTTTAATTTGACTCAGTTGCA ATCTCTGCAACTCCATTCGAACAATTTGGCTGGCACGGTGGAACTCACGTCATTCACAAA ACTGAAAAACCTATCTGTCCTGAATCTCTCAAACAATAAACTACTTGTGCTACATGGAGA AAACAGTTCATCGTTGGTGCCCTTCCCAAAAATAAAACTCTTAAGGTTAGCATCTTGCAG TATATCAACCTTTCCCAACATCTTGAAGCATCTCCATGAGATCACCACTCTTGACCTTTC GCATAACAAAATCCAGGGAGCTATACCTCAGTGGGCATGGGAGACATGGAGAGGCATGTA CTTTCTCCTCCTGAACATATCACACAATAACATTACAAGTCTTGGATCAGATCCTCTGCT TCCTCTTGAGATTGACTTCTTTGATCTCAGTTTCAACAGCATTGAAGGGCCCATACCTGT ACCACAAGAAGGTAGTACCATGTTAGATTATTCAAGCAACCAGTTCTCCTCCATGCCTCT TCATTACTCAACTTACCTTGGTGAAACTTTTACTTTCAAGGCTTCCAAAAACAAACTGTC TGGAAATATTCCATCAATCTGTAGTGCTCCGAGACTACAACTCATTGATCTCTCTTACAA TAACTTGAGTGGTTCGATCCCATCTTGTTTAATGGAGGATGTCACTGCATTACAAATATT AAATCTGAAGGAAAATAAACTTGTTGGAACAATACCAGATAACATCAAGGAAGGTTGTGC ACTTGAGGCAATAGATTTAAGTGGCAATTTGTTTGAGGGGAGGATACCCAGATCTCTAGT TGCTTGCAGGAACTTGGAGATCCTCGACATTGGAAACAATGAGATTAGTGACTCCTTCCC ATGTTGGATGAGCAAACTTCCTAAACTTCAAGTCCTTGCCCTCAAGTCTAACAAGTTCAC TGGACAAATAATGGATCCTTCATATACAGTTGATGGAAACAGTTGTGAATTTACAGAGCT CAGAATTGCCGATATGGCCTCAAATAACTTCAATGGAACATTGCCAGAAGCATGGTTTAC GATGCTCAAGTCCATGAATGCCATATCTGATAATGATACATTAGTCATGGAAAATCAATA TTACCATGGGCAAACATACCAGTTTACTGCTGCAGTTACATACAAAGGGAATTACATCAC AATTTCCAAGATCTTGAGGACCCTTGTGCTGATTGATTTCTCGAATAATGCATTCCATGG CACCATTCCTGAGACTATCGGGGAGCTTGTTCTGCTTCATGGGCTCAACATGTCTCACAA TTCACTAACAGGACCAATTCCAACTCAGTTTGGCAGGCTGAATCAACTTGAGTCACTGGA CCTCTCCTCAAATGAGCTCTTTGGTGAAATTCCCAAGGAGCTAGCATCACTCAACTTCCT TTCAATACTGAATTTGTCTTATAACACGTTGGTTGGAAGAATACCAAATTCATATCAGTT TTCCACATTTTCGAACAACTCTTTTCTTGGAAACACTGGTTTGTGTGGACCGCCATTATC TAAACAATGTGATAACCCACAAGAGTCAACTGTGATGCCATATGTTTCGGAGAAATCCAT AGATGTTCTACTAGTCCTCTTCACTGCATTGGGTTTTGGTGTTTCCTTTGCAATTACAAT CCTAATTGTATGGGGAAGGCATATGAAAAAACAGCGATGAGAGTACTTCGTTTATGTATA CAACTCTAACAGTGCTGAGACAGGCAAATTTTTGTAATTGAAGCTATGAACACTCTGATC TGAGCAATAATTCAGGCACCACTGTATCTAGTAAAATGAGTTCGTACTTGCCAGGTAGTA GCTCCTCCACTTGGTTCTTGTAATGTGTTGGGGCAAGTTGTCTGCATCTACGATATATGT ATGATTGAGTATTTTAATTTTGTGAGCTTCACAATATGAATCATTGAGAACATGTACAGA AAACCAAACAGAAATGTGAACTGTCGATTATTCT