Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0211500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:5856248:5859276:-1 gene:Os12g0211500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os12t0211500-01)
Sequence	ATGTCGTCGTTCTCCAAGAGAGTCCCTCACCATGTGGCATCACTCCTAGCAATGATGCTC ATCCTCCAGCTAGTCCAGGCCACCACGCTCGACGACCTTACGACGACCTCCTCCGAAACG ACGCCGGCAATGTGCCTTCCAGACCAGGCTTCCGCGCTGCTCCGGCTGAAGCACTCCTTC AACGCGACGGCCGGCGACTACTCCACCACCTTTCGATCATGGGTCCCTGGTGCAGACTGC TGTCGCTGGGAGGGCGTCCACTGCGACGGCGCCGATGGCCGTGTCACCTCACTCGACTTG GGAGGCCACAACCTGCAAGCCGGCGGCCTCGACCATGCACTGTTCAGGTTAACCTCACTC AAGCACCTCAACCTCTCTGGTAACATCTTCACCATGTCCCAGCTCCCGGCCACTGGATTC GAGCAGCTCACCGAGCTCACACACCTTGACCTCTCGGACACCAACATCGCCGGCAAGGTG CCGGCTGGCATTGGGCGCCTCGTGAGCCTGGTCTACCTCGACCTCTCCACGAGCTTCGTC ATCGTGTCTTACGATGACGAAAACAGCATCACACAGTACGCTGTAGACTCCATTGGGCAG CTCTCAGCACCAAACATGGAGACCTTGCTCACAAACCTCACTAACCTGGAGGAGCTCCAT ATGGGAATGGTGGATATGTCCAATAATGGCGAATTGTGGTGTGACCACATAGCCAAGTAC ACACCTAAGCTTCAAGTTCTTAGTTTACCTTACTGCTCACTGTCAGGTCCCGTATGCGCA TCATTTGCTGCCATGCGATCGCTCACCACGATCGAGCTTCATTACAATTTATTGTCAGGT TCAGTGCCAGAGTTCTTGGCTGGCTTTTCCAACCTCACTGTTCTTCAGCTATCCACAAAC AAGTTTCAAGGATGGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTGAGAACAATTGAT CTTTCTAAGAATCCTGGCATATCTGGTAATCTGCCAAATTTCTCACAGGACAGTAGCTTG GAGAATTTGTCCGTCAGTAGAACAAACTTCACAGGTATGATTCCGAGCTCCATCAGCAAT CTCAGATCTCTGAAGAAGTTGGGCATTGGTGCAAGTGGTTTCTCTGGAACACTGCCCTCT TCGTTAGGTAGCTTCCTATACTTGGATTTGCTAGAAGTGTCTGGGTTCCAGATAGTAGGA TCCATGCCGTCATGGATATCCAACCTAACTTCTCTTACTGTTCTCCAGTTCTCCAACTGC GGATTGTCTGGACATGTACCTTCTTCAATAGGAAACTTAAGGGAATTGATTAAGTTAGCA CTGTACAACTGCAAGTTTTCAGGGAAGGTGCCTCCGCAGATCTTAAATTTGACTCATTTG GAAACTCTCGTGCTCCATTCGAACAATTTTGACGGCACAATAGAACTCACCTCATTCTCA AAACTGAAAAACCTATCCGTCCTGAATCTCTCAAACAATAAACTAGTAGTGGTAGATGGA GAAAATATTTCATCACTGGTGTCATTCCCCAATTTGGAGTTCTTAAGTTTAGCATCTTGC AGCATGTCTACTTTTCCCAATATCTTGAAGCATCTCGATAAGATGTTTAGTCTTGACATT TCACATAACCAGATCCAAGGAGCTATACCACAGTGGGCATGGAAGACATGGAAAGGCTTG CAATTTCTCCTCTTGAACATGTCGCACAATAACTTTACAAGTCTTGGATCTGATCCTTTG CTTCCTCTTCATATAGAATTCCTTGACCTCAGTTTCAACAGTATTGAAGGGCCCATACCG ATACCACAAGAAGGTAGCAGCACATTAGATTACTCGAGCAACCAATTCTCATCTATTCCT CTTCATTACTTAACTTACCTTGGGGAAACTCTCACTTTCAAGGCCTCCAGAAACAAACTC TCTGGAGATATTCCACCATCAATATGTACCGCTGCTACGAATTTGCAACTCTTTGATCTC TCTTACAATAACTTGAGTGGTTCGATCCCATCCTGCTTAATGGAGGATGCCATTGAATTA CAAGTATTAAGTCTAAAAGAAAATAAACTTGTTGGAAATTTACCTGATAGCATCAAGGAA GGCTGTTCACTTGAGGCAATAGATTTAAGTGGCAATTTGATTGACGGAAAGATACCCAGA TCTCTAGTTTCTTGCAGGAACTTGGAGATCCTTGACGTTGGAAACAATCAGATTAGTGAC TCCTTTCCATGTTGGATGAGTAAACTTCGTAAACTTCAAGTCCTTGTCCTCAAGTCTAAC AAGTTCACTGGACAAGTAATGGATCCTTCATATACAGTTGACAGGAACAGCTGTGCATTT ACGCAGCTCAGAATTGCTGACATGGCCTCAAACAACTTCAATGGAACATTGCCAGAAGCA TGGTTTAAGATGCTCAAGTCCATGATTGCCATGACTCAAAATGATACACTAGTCATGGAA AATAAATATTACCATGGGCAAACATACCAGTTTACTGCCTCAGTTACATACAAAGGGAGT GACACGACAATTTCCAAGATATTGAGGACCCTTATGCTGATTGATTTCTCAAATAATGCA TTCCATGGTACCATTCCTGAGACTGTCGGGGGGCTTGTACTGCTTCACGGGCTCAACATG TCTCACAATGCCCTTACAGGATCAATTCCAACTCAGTTTGGCAGGTTGAATCAACTTGAG TCATTGGACCTCTCCTCGAATGAGCTCACTGGGGGGATCCCCAAGGAGCTAGCATCACTC AACTTCCTTTCAACACTGAATTTGTCCTACAACATGTTGGTTGGAAGAATACCAAACTCA TATCAGTTTTCCACCTTTTCCAACAATTCTTTTCTTGGAAACATTGGTTTGTGTGGACCA CCGTTATCCAAACAATGTGACAACCCAAAAGAGCCCATTGTTATGACATACACTTCGGAG AAATCCACAGATGTTGTACTAGTCCTCTTCACTGCATTGGGATTTGGTGTTTCCTATGCA ATGACAATCCTAATTTT

Peptide Sequence

PEP ID	Os12t0211500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:5856248:5859276:-1 gene:Os12g0211500 transcript:Os12t0211500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os12t0211500-01)
Sequence	MSSFSKRVPHHVASLLAMMLILQLVQATTLDDLTTTSSETTPAMCLPDQASALLRLKHSF NATAGDYSTTFRSWVPGADCCRWEGVHCDGADGRVTSLDLGGHNLQAGGLDHALFRLTSL KHLNLSGNIFTMSQLPATGFEQLTELTHLDLSDTNIAGKVPAGIGRLVSLVYLDLSTSFV IVSYDDENSITQYAVDSIGQLSAPNMETLLTNLTNLEELHMGMVDMSNNGELWCDHIAKY TPKLQVLSLPYCSLSGPVCASFAAMRSLTTIELHYNLLSGSVPEFLAGFSNLTVLQLSTN KFQGWFPPIIFQHKKLRTIDLSKNPGISGNLPNFSQDSSLENLSVSRTNFTGMIPSSISN LRSLKKLGIGASGFSGTLPSSLGSFLYLDLLEVSGFQIVGSMPSWISNLTSLTVLQFSNC GLSGHVPSSIGNLRELIKLALYNCKFSGKVPPQILNLTHLETLVLHSNNFDGTIELTSFS KLKNLSVLNLSNNKLVVVDGENISSLVSFPNLEFLSLASCSMSTFPNILKHLDKMFSLDI SHNQIQGAIPQWAWKTWKGLQFLLLNMSHNNFTSLGSDPLLPLHIEFLDLSFNSIEGPIP IPQEGSSTLDYSSNQFSSIPLHYLTYLGETLTFKASRNKLSGDIPPSICTAATNLQLFDL SYNNLSGSIPSCLMEDAIELQVLSLKENKLVGNLPDSIKEGCSLEAIDLSGNLIDGKIPR SLVSCRNLEILDVGNNQISDSFPCWMSKLRKLQVLVLKSNKFTGQVMDPSYTVDRNSCAF TQLRIADMASNNFNGTLPEAWFKMLKSMIAMTQNDTLVMENKYYHGQTYQFTASVTYKGS DTTISKILRTLMLIDFSNNAFHGTIPETVGGLVLLHGLNMSHNALTGSIPTQFGRLNQLE SLDLSSNELTGGIPKELASLNFLSTLNLSYNMLVGRIPNSYQFSTFSNNSFLGNIGLCGP PLSKQCDNPKEPIVMTYTSEKSTDVVLVLFTALGFGVSYAMTILI

Transcript Sequence

Transcript ID	Os12t0211500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:5856248:5859276:-1 gene:Os12g0211500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os12t0211500-01)
Sequence	ACCTTCACCACCATGTCGTCGTTCTCCAAGAGAGTCCCTCACCATGTGGCATCACTCCTA GCAATGATGCTCATCCTCCAGCTAGTCCAGGCCACCACGCTCGACGACCTTACGACGACC TCCTCCGAAACGACGCCGGCAATGTGCCTTCCAGACCAGGCTTCCGCGCTGCTCCGGCTG AAGCACTCCTTCAACGCGACGGCCGGCGACTACTCCACCACCTTTCGATCATGGGTCCCT GGTGCAGACTGCTGTCGCTGGGAGGGCGTCCACTGCGACGGCGCCGATGGCCGTGTCACC TCACTCGACTTGGGAGGCCACAACCTGCAAGCCGGCGGCCTCGACCATGCACTGTTCAGG TTAACCTCACTCAAGCACCTCAACCTCTCTGGTAACATCTTCACCATGTCCCAGCTCCCG GCCACTGGATTCGAGCAGCTCACCGAGCTCACACACCTTGACCTCTCGGACACCAACATC GCCGGCAAGGTGCCGGCTGGCATTGGGCGCCTCGTGAGCCTGGTCTACCTCGACCTCTCC ACGAGCTTCGTCATCGTGTCTTACGATGACGAAAACAGCATCACACAGTACGCTGTAGAC TCCATTGGGCAGCTCTCAGCACCAAACATGGAGACCTTGCTCACAAACCTCACTAACCTG GAGGAGCTCCATATGGGAATGGTGGATATGTCCAATAATGGCGAATTGTGGTGTGACCAC ATAGCCAAGTACACACCTAAGCTTCAAGTTCTTAGTTTACCTTACTGCTCACTGTCAGGT CCCGTATGCGCATCATTTGCTGCCATGCGATCGCTCACCACGATCGAGCTTCATTACAAT TTATTGTCAGGTTCAGTGCCAGAGTTCTTGGCTGGCTTTTCCAACCTCACTGTTCTTCAG CTATCCACAAACAAGTTTCAAGGATGGTTTCCTCCCATCATCTTCCAGCACAAGAAGTTG AGAACAATTGATCTTTCTAAGAATCCTGGCATATCTGGTAATCTGCCAAATTTCTCACAG GACAGTAGCTTGGAGAATTTGTCCGTCAGTAGAACAAACTTCACAGGTATGATTCCGAGC TCCATCAGCAATCTCAGATCTCTGAAGAAGTTGGGCATTGGTGCAAGTGGTTTCTCTGGA ACACTGCCCTCTTCGTTAGGTAGCTTCCTATACTTGGATTTGCTAGAAGTGTCTGGGTTC CAGATAGTAGGATCCATGCCGTCATGGATATCCAACCTAACTTCTCTTACTGTTCTCCAG TTCTCCAACTGCGGATTGTCTGGACATGTACCTTCTTCAATAGGAAACTTAAGGGAATTG ATTAAGTTAGCACTGTACAACTGCAAGTTTTCAGGGAAGGTGCCTCCGCAGATCTTAAAT TTGACTCATTTGGAAACTCTCGTGCTCCATTCGAACAATTTTGACGGCACAATAGAACTC ACCTCATTCTCAAAACTGAAAAACCTATCCGTCCTGAATCTCTCAAACAATAAACTAGTA GTGGTAGATGGAGAAAATATTTCATCACTGGTGTCATTCCCCAATTTGGAGTTCTTAAGT TTAGCATCTTGCAGCATGTCTACTTTTCCCAATATCTTGAAGCATCTCGATAAGATGTTT AGTCTTGACATTTCACATAACCAGATCCAAGGAGCTATACCACAGTGGGCATGGAAGACA TGGAAAGGCTTGCAATTTCTCCTCTTGAACATGTCGCACAATAACTTTACAAGTCTTGGA TCTGATCCTTTGCTTCCTCTTCATATAGAATTCCTTGACCTCAGTTTCAACAGTATTGAA GGGCCCATACCGATACCACAAGAAGGTAGCAGCACATTAGATTACTCGAGCAACCAATTC TCATCTATTCCTCTTCATTACTTAACTTACCTTGGGGAAACTCTCACTTTCAAGGCCTCC AGAAACAAACTCTCTGGAGATATTCCACCATCAATATGTACCGCTGCTACGAATTTGCAA CTCTTTGATCTCTCTTACAATAACTTGAGTGGTTCGATCCCATCCTGCTTAATGGAGGAT GCCATTGAATTACAAGTATTAAGTCTAAAAGAAAATAAACTTGTTGGAAATTTACCTGAT AGCATCAAGGAAGGCTGTTCACTTGAGGCAATAGATTTAAGTGGCAATTTGATTGACGGA AAGATACCCAGATCTCTAGTTTCTTGCAGGAACTTGGAGATCCTTGACGTTGGAAACAAT CAGATTAGTGACTCCTTTCCATGTTGGATGAGTAAACTTCGTAAACTTCAAGTCCTTGTC CTCAAGTCTAACAAGTTCACTGGACAAGTAATGGATCCTTCATATACAGTTGACAGGAAC AGCTGTGCATTTACGCAGCTCAGAATTGCTGACATGGCCTCAAACAACTTCAATGGAACA TTGCCAGAAGCATGGTTTAAGATGCTCAAGTCCATGATTGCCATGACTCAAAATGATACA CTAGTCATGGAAAATAAATATTACCATGGGCAAACATACCAGTTTACTGCCTCAGTTACA TACAAAGGGAGTGACACGACAATTTCCAAGATATTGAGGACCCTTATGCTGATTGATTTC TCAAATAATGCATTCCATGGTACCATTCCTGAGACTGTCGGGGGGCTTGTACTGCTTCAC GGGCTCAACATGTCTCACAATGCCCTTACAGGATCAATTCCAACTCAGTTTGGCAGGTTG AATCAACTTGAGTCATTGGACCTCTCCTCGAATGAGCTCACTGGGGGGATCCCCAAGGAG CTAGCATCACTCAACTTCCTTTCAACACTGAATTTGTCCTACAACATGTTGGTTGGAAGA ATACCAAACTCATATCAGTTTTCCACCTTTTCCAACAATTCTTTTCTTGGAAACATTGGT TTGTGTGGACCACCGTTATCCAAACAATGTGACAACCCAAAAGAGCCCATTGTTATGACA TACACTTCGGAGAAATCCACAGATGTTGTACTAGTCCTCTTCACTGCATTGGGATTTGGT GTTTCCTATGCAATGACAATCCTAATTTT