Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0211000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:5817169:5819154:1 gene:Os12g0211000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0211000-01)
Sequence	ACCTATTCGATTCGATGGAAGGCGGCGGCGGCGGCGATTGCCGGCGGCCGGACTCCGACG TGCACGAGGGGACGGCAGTTGCTAGTCGCCCTAGCTCCAGCAAGAGGAAAGACGACTGAG GATTTAGAGAAGGATTTGCAGCCGGAGGAGGAGTCGCGTCCGTCGCCGCCGCCGCCGCCG CCGGCGAAGGGTTCGTTGTGTCTGCCGGCGGCGTGCCACGAGGACGGCGTCATCCCGGCA TTTGTGATCCCGGGCAGCAAGCATCGCGACGGGTCCATCTACAGGACGGATGCGCACTAC TGGCACGGCCTCTACCACCTCGACGACACCAGCGAAACTCGCCTGGAACCGATGACGCCA TCGTATTCAGAGCAGGACTGCAAGCCATGCGTCGCCGATTGCCAGTGGCACATTGGTGGC TCCATGATGCAGATCTTCTCCCTTAAGCTAGCTGAAATCTCTAATTTCGCCACCAGAGCT CCTGGTGCCGGTGCTATTCAGCTGTATGGGTTCATGGCTGTCCGGAATCTCTTGGACCCA TTGCGAAACTACGTCTTCAACCGCACCAGGGACAATCCGTTCACCATCGGCGACGTCTCC TATCCGTTCATACAGATGACTGGCCCTAAGAGGGGCATCGCGATGAACGCTCGCGTGATG ATCGAGTACGACATGAGGATCAAGATGGGGGAGAGTGAGCAAGATGATCTGTTGCTTGTC GACGGGGCTGCCACCTTCAGCGAGATAACGAATTTCATACCATACATTTATCGCATCAAT GGTGATTGCGGCATGGCGGTGGACATAAGGCTAGCACACTTCTCCCGTGCAATTGAGGCC ACGGCGCAAGTTTGGGTATATAAACTAAAGGATGGCTGTGGCAGCCTAAACTTGACTATA ACTTGTCACGTTAGTTATATGCCCCCACAAATTAAGCTCTTTCAAGGTCCAATTGATAAG CTAGGTGACCAAAATAGGTTTGTAGTTGCTGCAAAGCTGAATACTCTGATGATTACAGAG TTCAAGCTTGTTCATCAGCACGACTCAATCAGTCAGAGATTTGAGTCCATGGTTATGCCA CATGGAAGTAAGTTCCACTATGCCAAGTTAGCGGATTTAGCAACTATAGGCGTGGAGATC TTTTGGTCAATTTTACCCATTTAG

Peptide Sequence

PEP ID	Os12t0211000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:5817169:5819154:1 gene:Os12g0211000 transcript:Os12t0211000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0211000-01)
Sequence	TYSIRWKAAAAAIAGGRTPTCTRGRQLLVALAPARGKTTEDLEKDLQPEEESRPSPPPPP PAKGSLCLPAACHEDGVIPAFVIPGSKHRDGSIYRTDAHYWHGLYHLDDTSETRLEPMTP SYSEQDCKPCVADCQWHIGGSMMQIFSLKLAEISNFATRAPGAGAIQLYGFMAVRNLLDP LRNYVFNRTRDNPFTIGDVSYPFIQMTGPKRGIAMNARVMIEYDMRIKMGESEQDDLLLV DGAATFSEITNFIPYIYRINGDCGMAVDIRLAHFSRAIEATAQVWVYKLKDGCGSLNLTI TCHVSYMPPQIKLFQGPIDKLGDQNRFVVAAKLNTLMITEFKLVHQHDSISQRFESMVMP HGSKFHYAKLADLATIGVEIFWSILPI

Transcript Sequence

Transcript ID	Os12t0211000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:5817169:5819154:1 gene:Os12g0211000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0211000-01)
Sequence	GATGCAGTTGAACCGCAAAGCCCTAAACCTATTCGATTCGATGGAAGGCGGCGGCGGCGG CGATTGCCGGCGGCCGGACTCCGACGTGCACGAGGGGACGGCAGTTGCTAGTCGCCCTAG CTCCAGCAAGAGGAAAGACGACTGAGGATTTAGAGAAGGATTTGCAGCCGGAGGAGGAGT CGCGTCCGTCGCCGCCGCCGCCGCCGCCGGCGAAGGGTTCGTTGTGTCTGCCGGCGGCGT GCCACGAGGACGGCGTCATCCCGGCATTTGTGATCCCGGGCAGCAAGCATCGCGACGGGT CCATCTACAGGACGGATGCGCACTACTGGCACGGCCTCTACCACCTCGACGACACCAGCG AAACTCGCCTGGAACCGATGACGCCATCGTATTCAGAGCAGGACTGCAAGCCATGCGTCG CCGATTGCCAGTGGCACATTGGTGGCTCCATGATGCAGATCTTCTCCCTTAAGCTAGCTG AAATCTCTAATTTCGCCACCAGAGCTCCTGGTGCCGGTGCTATTCAGCTGTATGGGTTCA TGGCTGTCCGGAATCTCTTGGACCCATTGCGAAACTACGTCTTCAACCGCACCAGGGACA ATCCGTTCACCATCGGCGACGTCTCCTATCCGTTCATACAGATGACTGGCCCTAAGAGGG GCATCGCGATGAACGCTCGCGTGATGATCGAGTACGACATGAGGATCAAGATGGGGGAGA GTGAGCAAGATGATCTGTTGCTTGTCGACGGGGCTGCCACCTTCAGCGAGATAACGAATT TCATACCATACATTTATCGCATCAATGGTGATTGCGGCATGGCGGTGGACATAAGGCTAG CACACTTCTCCCGTGCAATTGAGGCCACGGCGCAAGTTTGGGTATATAAACTAAAGGATG GCTGTGGCAGCCTAAACTTGACTATAACTTGTCACGTTAGTTATATGCCCCCACAAATTA AGCTCTTTCAAGGTCCAATTGATAAGCTAGGTGACCAAAATAGGTTTGTAGTTGCTGCAA AGCTGAATACTCTGATGATTACAGAGTTCAAGCTTGTTCATCAGCACGACTCAATCAGTC AGAGATTTGAGTCCATGGTTATGCCACATGGAAGTAAGTTCCACTATGCCAAGTTAGCGG ATTTAGCAACTATAGGCGTGGAGATCTTTTGGTCAATTTTACCCATTTAGCTACAAGAAA GCTTTCGAGCCTTCTACTTTGTTACATTCTATTTATTTTCTGGCAAACAATCACCTACCT GTAAATAGCTAGAGCAATGCAAGTTTCTTTTTTAGGATTTGTGCCATGTATGTATCATTT CCATATGAACCAACCAAGGCTTCATGTGTCTGTGTCAATTGTCAGGGCAAATCTTGTAGA CCCAACCATAGCAGGGTATTTAATTGATGACCATACACCTTC