Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0210400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:5766036:5773224:1 gene:Os12g0210400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os12t0210400-01)
Sequence	ATGGGGGTTTCTCCATGGATTATCATCTTCTTGTTGATTGTTCTTGTGCAAGCTTTTGTC GCTTCGGCCGATACGAACGCACAGGACACTTCTGGACTTAACGGGCTTGCAGGTAGCTGG GGCAGCGCACCATCGAATTGGGCTGGCAACGATCCATGTGGAGACAAATGGATTGGGATA ATTTGCACCGGGAACCGGGTCACATCCATAAGACTGTCAAGTTTCGGACTGTCCGGGACG CTTTCCGGGGACATTCAGTCCTTATCAGAATTGCAGTACCTGGACTTATCCTACAACAAG AACTTGAATGGCCCCCTTCCTTCAACCATTGGAACCTTGAGCAAGCTCCAAAACTTAATT CTTGTCGGCTGCGGCTTTACAGGTGAAATACCAAAGGAGATAGGCCAGCTCTCAAACCTG ATATTTCTATCATTGAACTCCAACAAGTTCACTGGTAGCATACCGCCATCGCTTGGCGGC CTCTCAAAGCTATATTGGTTTGATCTGGCTGACAATCAGCTCACTGGAGGACTTCCAATA TCCAATGCGACAAGTCCTGGTCTGGACAATCTCACAAGTACTAAGCACTTCCATTTTGGG ATAAACCAGCTCTCTGGCAGCATACCTAGCCAGATTTTCAACTCAAATATGAAGCTGATA CATCTGCTTCTTGACAACAACAAATTCTCCGGTAGCATCCCTTCTACCTTAGGCCTTCTT AATACACTGGAAGTTCTGCGTTTCGATAACAATGCGCAGTTGACCGGACCGGTTCCTACC AACCTCAAGAACCTAACCAAGCTTGCAGAATTCCATCTAGCAAACAGCAATCTTACTGGT CCATTGCCAGACCTAACTGGAATGAGCTCACTCAGCTTTGTGGACATGAGCAACAACAGC TTCAGTGCATCTGATGCGCCCTCCTGGATAACCACTTTGCCATCGTCATTGACTTCACTG TACCTAGAAAATCTGCGCATCAGTGGGGAGGTACCGCAAAGTCTCTTTAGTCTCCCTTCA ATTCAAACACTGAGGCTTCGGGGCAACCGTCTGAATGGCACCCTAAATATAGCAGACTTC AGCAGTCAGCTCCAACTAGTCGATTTGCGGGACAACTTTATCACAGCACTAACTGTAGGA ACACAATACAAGAAGACTCTCATGCTCTCAGGAAATCCATATTGCAACCAAGTGAACGAC GACGTGCACTGCAAAGCCACCGGACAATCGAACCCGGCATTGCCACCATACAAGACTACC TCCAACTGCCCTGCCCTGCCTCCCACATGCCTCTCAACCCAGCAGCTGAGCCCAACCTGC ATTTGCTCTGTGCCATACAGAGGCACACTCTTCTTCAGATCACCAGGTTTTTCAGACCTG GGCAACAGCTCATACTTCATTCAGCTGGAGGGGACAATGAAAGCCAAGTTCTTGAACCTC AGTCTCCCGGTCGATTCAATTGCGATCCACGACCCGTTTGTCGACACCAACAACAACTTG GAGATGAGCTTGGAGGTGTACCCCAGTGGCAAGGATCAGTTTAGTGAGCAAGACATTTCT GGCATTGGTTTCATCCTGAGTAACCAGACATATAAGCCTCCTTCTAACTTTGGCCCATAC TATTTCCTTGGACAGACCTACTCCTTTGCTAATGGGGCGTTGCAAACTTCAAAATCGAAC ACAAACCACATCCCGCTTATCGTCGGTGCTTCGGTTGGAGGTGCAGCTGTAATTGCAGCA TTGCTTGCACTCACAATCTGCATTGCTAGAAGGAAGAGAAGTCCAAAGCAGACTGAAGAT AGGAGCCAGTCTTATGTTTCCTGGGACATCAAGAGCACCAGCACTAGCACTGCCCCGCAG GTGCGAGGTGCGAGGATGTTCTCCTTCGACGAGCTGAAGAAGGTCACCAACAACTTCTCG GAGGCCAATGACATCGGCACCGGAGGCTACGGGAAGGTTTACAGGGGAACACTTCCTACT GGTCAGCTGGTTGCCGTGAAGAGATCCCAGCAAGGCTCCCTGCAGGGCAACCTCGAGTTC AGGACTGAGATCGAGCTCCTGTCCAGGGTTCATCACAAGAATGTCGTCAGCCTAGTCGGA TTCTGCTTCGACCAGGGCGAGCAGATGCTTGTCTACGAGTATGTCCCCAATGGCACCCTC AAGGAGAGCCTCACAGGGAAATCTGGTGTGAGGCTGGACTGGAAGCGGCGGCTCCGGGTT GTCCTCGGTGCGGCGAAGGGTATCGCCTACCTGCATGAGCTCGCTGACCCTCCGATCATC CACCGTGACATCAAGTCGAGCAATGTTCTCCTCGATGAGCGGCTCAACGCCAAGGTCTCC GACTTCGGCCTGTCCAAGCTTCTCGGCGAAGACGGTCGTGGCCAGATCACCACCCAAGTC AAGGGCACAATGGGGTACCTGGACCCGGAGTACTACATGACGCAGCAGCTGACGGACCGG AGCGACGTGTACAGCTTCGGCGTGCTGCTGCTGGAGGTGATCACGGCGAGGAAGCCGCTG GAGCGCGGCCGCTACGTGGTCCGGGAGGTCAAGGAGGCGGTGGACCGCCGCAAGGACATG TACGGCCTCCACGAGCTCCTCGACCCCGCGCTGGGGGCCTCCTCGGCGCTCGCCGGCCTC GAGCCGTACGTCGACCTGGCCCTCCGCTGCGTCGAGGAGTCCGGCGCCGACCGCCCCTCC ATGGGCGAGGCCGTCGCCGAGATCGAGCGGATCGCCAAGGTGGCCGGCGCTGGGGGTGCG GCCGCCGCCGAGTCGGCGGCGTCGGACTCCATGAGCTACGCCGCTAGCCGGACGCCGCGC CACCCCTATGGCGGCGGCGGCGGCGACAGCGCGTCGGAGTATAGCGGCGGCGGGCTGCCG TCGATGAGGGTGGAGCCCAAGTGA

Peptide Sequence

PEP ID	Os12t0210400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:5766036:5773224:1 gene:Os12g0210400 transcript:Os12t0210400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os12t0210400-01)
Sequence	MGVSPWIIIFLLIVLVQAFVASADTNAQDTSGLNGLAGSWGSAPSNWAGNDPCGDKWIGI ICTGNRVTSIRLSSFGLSGTLSGDIQSLSELQYLDLSYNKNLNGPLPSTIGTLSKLQNLI LVGCGFTGEIPKEIGQLSNLIFLSLNSNKFTGSIPPSLGGLSKLYWFDLADNQLTGGLPI SNATSPGLDNLTSTKHFHFGINQLSGSIPSQIFNSNMKLIHLLLDNNKFSGSIPSTLGLL NTLEVLRFDNNAQLTGPVPTNLKNLTKLAEFHLANSNLTGPLPDLTGMSSLSFVDMSNNS FSASDAPSWITTLPSSLTSLYLENLRISGEVPQSLFSLPSIQTLRLRGNRLNGTLNIADF SSQLQLVDLRDNFITALTVGTQYKKTLMLSGNPYCNQVNDDVHCKATGQSNPALPPYKTT SNCPALPPTCLSTQQLSPTCICSVPYRGTLFFRSPGFSDLGNSSYFIQLEGTMKAKFLNL SLPVDSIAIHDPFVDTNNNLEMSLEVYPSGKDQFSEQDISGIGFILSNQTYKPPSNFGPY YFLGQTYSFANGALQTSKSNTNHIPLIVGASVGGAAVIAALLALTICIARRKRSPKQTED RSQSYVSWDIKSTSTSTAPQVRGARMFSFDELKKVTNNFSEANDIGTGGYGKVYRGTLPT GQLVAVKRSQQGSLQGNLEFRTEIELLSRVHHKNVVSLVGFCFDQGEQMLVYEYVPNGTL KESLTGKSGVRLDWKRRLRVVLGAAKGIAYLHELADPPIIHRDIKSSNVLLDERLNAKVS DFGLSKLLGEDGRGQITTQVKGTMGYLDPEYYMTQQLTDRSDVYSFGVLLLEVITARKPL ERGRYVVREVKEAVDRRKDMYGLHELLDPALGASSALAGLEPYVDLALRCVEESGADRPS MGEAVAEIERIAKVAGAGGAAAAESAASDSMSYAASRTPRHPYGGGGGDSASEYSGGGLP SMRVEPK

Transcript Sequence

Transcript ID	Os12t0210400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:5766036:5773224:1 gene:Os12g0210400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os12t0210400-01)
Sequence	ACTAATCTAGCCTGTTGCAGTTCAATCAGAGCTTCTGACCTTGCAAAAGGATGAGCTGCT AAAAGCATTTCAGTGGCAGCTCAAGAGAGAGAAGAGAGAGAAATAGAAACTGCCCAAACA TGGGGGTTTCTCCATGGATTATCATCTTCTTGTTGATTGTTCTTGTGCAAGCTTTTGTCG CTTCGGCCGATACGAACGCACAGGACACTTCTGGACTTAACGGGCTTGCAGGTAGCTGGG GCAGCGCACCATCGAATTGGGCTGGCAACGATCCATGTGGAGACAAATGGATTGGGATAA TTTGCACCGGGAACCGGGTCACATCCATAAGACTGTCAAGTTTCGGACTGTCCGGGACGC TTTCCGGGGACATTCAGTCCTTATCAGAATTGCAGTACCTGGACTTATCCTACAACAAGA ACTTGAATGGCCCCCTTCCTTCAACCATTGGAACCTTGAGCAAGCTCCAAAACTTAATTC TTGTCGGCTGCGGCTTTACAGGTGAAATACCAAAGGAGATAGGCCAGCTCTCAAACCTGA TATTTCTATCATTGAACTCCAACAAGTTCACTGGTAGCATACCGCCATCGCTTGGCGGCC TCTCAAAGCTATATTGGTTTGATCTGGCTGACAATCAGCTCACTGGAGGACTTCCAATAT CCAATGCGACAAGTCCTGGTCTGGACAATCTCACAAGTACTAAGCACTTCCATTTTGGGA TAAACCAGCTCTCTGGCAGCATACCTAGCCAGATTTTCAACTCAAATATGAAGCTGATAC ATCTGCTTCTTGACAACAACAAATTCTCCGGTAGCATCCCTTCTACCTTAGGCCTTCTTA ATACACTGGAAGTTCTGCGTTTCGATAACAATGCGCAGTTGACCGGACCGGTTCCTACCA ACCTCAAGAACCTAACCAAGCTTGCAGAATTCCATCTAGCAAACAGCAATCTTACTGGTC CATTGCCAGACCTAACTGGAATGAGCTCACTCAGCTTTGTGGACATGAGCAACAACAGCT TCAGTGCATCTGATGCGCCCTCCTGGATAACCACTTTGCCATCGTCATTGACTTCACTGT ACCTAGAAAATCTGCGCATCAGTGGGGAGGTACCGCAAAGTCTCTTTAGTCTCCCTTCAA TTCAAACACTGAGGCTTCGGGGCAACCGTCTGAATGGCACCCTAAATATAGCAGACTTCA GCAGTCAGCTCCAACTAGTCGATTTGCGGGACAACTTTATCACAGCACTAACTGTAGGAA CACAATACAAGAAGACTCTCATGCTCTCAGGAAATCCATATTGCAACCAAGTGAACGACG ACGTGCACTGCAAAGCCACCGGACAATCGAACCCGGCATTGCCACCATACAAGACTACCT CCAACTGCCCTGCCCTGCCTCCCACATGCCTCTCAACCCAGCAGCTGAGCCCAACCTGCA TTTGCTCTGTGCCATACAGAGGCACACTCTTCTTCAGATCACCAGGTTTTTCAGACCTGG GCAACAGCTCATACTTCATTCAGCTGGAGGGGACAATGAAAGCCAAGTTCTTGAACCTCA GTCTCCCGGTCGATTCAATTGCGATCCACGACCCGTTTGTCGACACCAACAACAACTTGG AGATGAGCTTGGAGGTGTACCCCAGTGGCAAGGATCAGTTTAGTGAGCAAGACATTTCTG GCATTGGTTTCATCCTGAGTAACCAGACATATAAGCCTCCTTCTAACTTTGGCCCATACT ATTTCCTTGGACAGACCTACTCCTTTGCTAATGGGGCGTTGCAAACTTCAAAATCGAACA CAAACCACATCCCGCTTATCGTCGGTGCTTCGGTTGGAGGTGCAGCTGTAATTGCAGCAT TGCTTGCACTCACAATCTGCATTGCTAGAAGGAAGAGAAGTCCAAAGCAGACTGAAGATA GGAGCCAGTCTTATGTTTCCTGGGACATCAAGAGCACCAGCACTAGCACTGCCCCGCAGG TGCGAGGTGCGAGGATGTTCTCCTTCGACGAGCTGAAGAAGGTCACCAACAACTTCTCGG AGGCCAATGACATCGGCACCGGAGGCTACGGGAAGGTTTACAGGGGAACACTTCCTACTG GTCAGCTGGTTGCCGTGAAGAGATCCCAGCAAGGCTCCCTGCAGGGCAACCTCGAGTTCA GGACTGAGATCGAGCTCCTGTCCAGGGTTCATCACAAGAATGTCGTCAGCCTAGTCGGAT TCTGCTTCGACCAGGGCGAGCAGATGCTTGTCTACGAGTATGTCCCCAATGGCACCCTCA AGGAGAGCCTCACAGGGAAATCTGGTGTGAGGCTGGACTGGAAGCGGCGGCTCCGGGTTG TCCTCGGTGCGGCGAAGGGTATCGCCTACCTGCATGAGCTCGCTGACCCTCCGATCATCC ACCGTGACATCAAGTCGAGCAATGTTCTCCTCGATGAGCGGCTCAACGCCAAGGTCTCCG ACTTCGGCCTGTCCAAGCTTCTCGGCGAAGACGGTCGTGGCCAGATCACCACCCAAGTCA AGGGCACAATGGGGTACCTGGACCCGGAGTACTACATGACGCAGCAGCTGACGGACCGGA GCGACGTGTACAGCTTCGGCGTGCTGCTGCTGGAGGTGATCACGGCGAGGAAGCCGCTGG AGCGCGGCCGCTACGTGGTCCGGGAGGTCAAGGAGGCGGTGGACCGCCGCAAGGACATGT ACGGCCTCCACGAGCTCCTCGACCCCGCGCTGGGGGCCTCCTCGGCGCTCGCCGGCCTCG AGCCGTACGTCGACCTGGCCCTCCGCTGCGTCGAGGAGTCCGGCGCCGACCGCCCCTCCA TGGGCGAGGCCGTCGCCGAGATCGAGCGGATCGCCAAGGTGGCCGGCGCTGGGGGTGCGG CCGCCGCCGAGTCGGCGGCGTCGGACTCCATGAGCTACGCCGCTAGCCGGACGCCGCGCC ACCCCTATGGCGGCGGCGGCGGCGACAGCGCGTCGGAGTATAGCGGCGGCGGGCTGCCGT CGATGAGGGTGGAGCCCAAGTGAAGATGGTGGATTTGTTTCCAACGTTTTGTGTACAGCT TGATGATTTAGAGTATGTACGATTTCATTTGTGTAAATTTTGGTCGTCTATGCATGCTAA GTTTGGATTTTTGAATTTGAATGTTTGATGATGGCTAATTGAGAATTTGGGGTCGTTGTC AATCGAACTATACCC