Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0209200-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:5699790:5702413:1 gene:Os12g0209200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-box-containing protein 30 description:Similar to CONSTANS-LIKE a. (Os12t0209200-01)
Sequence

ATGAAGATCGGGTGCGACGCGTGCGAGCAGGCGGAGGCGGCGGTGCTGTGCTGCGCCGAC
GAGGCCGCGCTCTGCCGCCGCTGCGACGCCGCCGTCCACTCCGCCAACAGGCTCGCCGGC
AAGCACACCCGCGTCGCGCTCCTCCTCCCCTCCTCCTCCTCCGCCGCCGCCGGCGACGAC
GACCACCACCCCACCTGCGACATCTGCCAGGAGAAGACGGGCTACTTCTTCTGCCTCGAG
GACCGCGCCCTGCTCTGCCGGAGCTGCGACGTCGCCGTCCACACCGCCACTGCGCACGCC
GCCGCCCACCGCCGCTTCCTCATCACCGGCGTCCGCATCGGCGGCAGCGTCGACGCCGCC
GCCGCGGCCGACGTCATCGTCAGCCCAACAAGCAGCAGCATCGCGCCGGCCGGCTCGGCC
AGCAGCAACCACGCCGGCGCCGCCGGCAACAACAATGGCCGGTCGCCGGCGCCGGTGAGG
TTCTCAGGGGGAGACGGCGGCGTTGAGCCGGAGCAGCAGTGGCCGTGGAGTGACGTCTTC
GCCGCCGACGACGACGATGACGTCAGCGCCGCCATGGAGCAGTGCTACTATCATGGCATC
TCTGAACCTCACTCCTCCAGCCTCACTGGATGA

Peptide Sequence

PEP ID

Os12t0209200-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:5699790:5702413:1 gene:Os12g0209200 transcript:Os12t0209200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-box-containing protein 30 description:Similar to CONSTANS-LIKE a. (Os12t0209200-01)
Sequence

MKIGCDACEQAEAAVLCCADEAALCRRCDAAVHSANRLAGKHTRVALLLPSSSSAAAGDD
DHHPTCDICQEKTGYFFCLEDRALLCRSCDVAVHTATAHAAAHRRFLITGVRIGGSVDAA
AAADVIVSPTSSSIAPAGSASSNHAGAAGNNNGRSPAPVRFSGGDGGVEPEQQWPWSDVF
AADDDDDVSAAMEQCYYHGISEPHSSSLTG

Transcript Sequence

Transcript ID

Os12t0209200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:5699790:5702413:1 gene:Os12g0209200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-box-containing protein 30 description:Similar to CONSTANS-LIKE a. (Os12t0209200-01)
Sequence

AATTGGTCTCTCGTTGGGCTAACGACGCGGCGATCGAGTAGCTTAGCTAGCTGAAGCTGC
CACATGAAGATCGGGTGCGACGCGTGCGAGCAGGCGGAGGCGGCGGTGCTGTGCTGCGCC
GACGAGGCCGCGCTCTGCCGCCGCTGCGACGCCGCCGTCCACTCCGCCAACAGGCTCGCC
GGCAAGCACACCCGCGTCGCGCTCCTCCTCCCCTCCTCCTCCTCCGCCGCCGCCGGCGAC
GACGACCACCACCCCACCTGCGACATCTGCCAGGAGAAGACGGGCTACTTCTTCTGCCTC
GAGGACCGCGCCCTGCTCTGCCGGAGCTGCGACGTCGCCGTCCACACCGCCACTGCGCAC
GCCGCCGCCCACCGCCGCTTCCTCATCACCGGCGTCCGCATCGGCGGCAGCGTCGACGCC
GCCGCCGCGGCCGACGTCATCGTCAGCCCAACAAGCAGCAGCATCGCGCCGGCCGGCTCG
GCCAGCAGCAACCACGCCGGCGCCGCCGGCAACAACAATGGCCGGTCGCCGGCGCCGGTG
AGGTTCTCAGGGGGAGACGGCGGCGTTGAGCCGGAGCAGCAGTGGCCGTGGAGTGACGTC
TTCGCCGCCGACGACGACGATGACGTCAGCGCCGCCATGGAGCAGTGCTACTATCATGGC
ATCTCTGAACCTCACTCCTCCAGCCTCACTGGATGATGGCAGCTTAGCTTCAGTCAAATT
AATTAATGAGCTGCTATAATTGATTTCCATGAACTGATCCCACAGAGGTCATCAACATCG
AGAATATTAGTT