Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0209100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:5692925:5696271:1 gene:Os12g0209100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os12t0209100-01)
Sequence

ATGTCGTACATGCGAGGCGACCTGCTCACTAGGACACGGAAGCTGGTGAAGGGCATGGCC
AAACCTGCCCCTGCATGGCTCAAGGCCATGGAGCAGGCACCTCCACCCACATTCCCTCGT
ACTGATGGGAAGATTAAGAAGATCGAGTTGCCAGAAGATGTTTATGTCAAGAGGTTCTTC
AAAAAGCATCCAGATTCACTCTACCATGACGCAATCAAGATAAGCGGGTTTGATCCACCG
CCAGCACGAGTTTTTGCTTGGCGTGTCTTAGAATTGAAAAAGGACGGAGTCAATGAAGAT
GATGCAATGGCTGTAGCAGATATGGAGTATGCAGCAGAGAAGAAAGCCAAGAAGAAAGCA
TACAAGGAGCTGAAAGAAATCGCGCGCATCGAAGGAAAAAGGCCACCCCCGAATCCATAC
CCAAGCGCCATCAAAGAAATACAGGCAGAGGAAAAGAAGTATGTGAGAGAGCGTTTCCAT
AACCCCAAGATACTTGAGATTGTTAAGAAGATGAAAGAGGATAAGGAGTTATTTTTTAAA
GATAGAGAAGCATCCAGGGCTGGGCAGTAG

Peptide Sequence

PEP ID

Os12t0209100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:5692925:5696271:1 gene:Os12g0209100 transcript:Os12t0209100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os12t0209100-01)
Sequence

MSYMRGDLLTRTRKLVKGMAKPAPAWLKAMEQAPPPTFPRTDGKIKKIELPEDVYVKRFF
KKHPDSLYHDAIKISGFDPPPARVFAWRVLELKKDGVNEDDAMAVADMEYAAEKKAKKKA
YKELKEIARIEGKRPPPNPYPSAIKEIQAEEKKYVRERFHNPKILEIVKKMKEDKELFFK
DREASRAGQ

Transcript Sequence

Transcript ID

Os12t0209100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:5692925:5696271:1 gene:Os12g0209100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os12t0209100-01)
Sequence

GTCCTGCTGCTTCCGCCGCCACCGCCGCCTGCGCCGATCCCCATCCATTCCGCGAGCGAG
CGAGTGCTTCCGCCGCATCCATCCTGATCTCTGAGGATTATTCCAACTTCTGAGGCAAGA
TGTCGTACATGCGAGGCGACCTGCTCACTAGGACACGGAAGCTGGTGAAGGGCATGGCCA
AACCTGCCCCTGCATGGCTCAAGGCCATGGAGCAGGCACCTCCACCCACATTCCCTCGTA
CTGATGGGAAGATTAAGAAGATCGAGTTGCCAGAAGATGTTTATGTCAAGAGGTTCTTCA
AAAAGCATCCAGATTCACTCTACCATGACGCAATCAAGATAAGCGGGTTTGATCCACCGC
CAGCACGAGTTTTTGCTTGGCGTGTCTTAGAATTGAAAAAGGACGGAGTCAATGAAGATG
ATGCAATGGCTGTAGCAGATATGGAGTATGCAGCAGAGAAGAAAGCCAAGAAGAAAGCAT
ACAAGGAGCTGAAAGAAATCGCGCGCATCGAAGGAAAAAGGCCACCCCCGAATCCATACC
CAAGCGCCATCAAAGAAATACAGGCAGAGGAAAAGAAGTATGTGAGAGAGCGTTTCCATA
ACCCCAAGATACTTGAGATTGTTAAGAAGATGAAAGAGGATAAGGAGTTATTTTTTAAAG
ATAGAGAAGCATCCAGGGCTGGGCAGTAGCTGGTATATTGCCATACTGTTGGTCAACTAG
GTATTGTTGCTTATGATATTAACAAGCTGCTGTTTGAATCTGACTATTGTTTAACTTTCT
CATGAAGAAATAATAGTTGCACAAATCGCGTTTGGTAGGTAGCAAACAGAAAAATCATAC
CAGTTTTGATATATGTTTGCTATGTGGATGCAAAGGCGACTTCATTACTTTATGGGACTT
TGGCATGATTTCAGTTTC