Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0207200-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:5596782:5598867:1 gene:Os12g0207200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb/SANT-like domain domain containing protein. (Os12t0207200-01)
Sequence

ATTCGGCTCAGCTCCACCACCGCTCCTCCCGACCTAGCGCCGCCGCCGCCGCCGCCGCCC
TGCACCGTCTCCCCGCCGGCCGCCTCCACCCGCACCGCGCGGTGCCCCCCTCATCACCAA
GAACGGAAGATGACAGAAGCTGCTGAGTGGAATGATGAGAACACTAAAATTATCTGTGAA
CTTTATGCTGAACAAGTTCGGGCTGGAAATCGACCAAGTACTCATCTCAACAGCATTGGA
TACAGCCAAGTTGCATTGAAGTTTCAGCAGAGAACTCATTTGCTTTACACCAAGAGACAA
CTTAAAAACAAATGGGATAAACTTAGGAATGAGTACACCATCTGGAAGAAATTGCTTATA
AGAGGGTCAGGTTTAGGTTGGGACAGTACAAAAGGAACAATTGCAGCTGACGAAAACTGG
TGGAACAAGACAAATACAGAGTTGCCAGGTGCAAAAAAATTCCGCAAAGCTGGAATGAAA
AATCTGGATCATTTGAGAGTGATGTTTGATGATATTGCCAGTAACGGTGTGGATCATACA
CCGGTGCCAGCAACAAGTTCGCCATCTACTCTGGAAAGTCCTGTAAATGTTGCTAATCTT
GACGGACTAGACAATGACATGGAAGATAATGATGACACTCAGCTGGAAGAGGAGTCTCCC
TTGAATCGGAACAAGAAAAGACCTCGCCATGCTAATAATGCTAACAAGAACAAGAGTAGT
AGGACTGAAATTGCTTTGCTCATGCAAGCTCAATTGAAGGGTATGGCAGATTTGGCCGAG
AAAGCACAGGCCACTTTTGAGAATTTCACCTCCCTTGTTGGCTCTCTAGGATCCAGCATT
CAGTATGTTATGACATTGGTTCAAGAATGTGGAGCACGGAGTGGAAGCGACGAGCATTTC
ATTGCAACTGAGTTGTTTGTCAGTAGAGAACAAAGAGAAATGTTCTTGACTCTGAGTACC
GCTGAGGAGCGTCTAGAATGGCTTAGAAGAAAGTATAAAGCTAAGTATGGTGCTTAA

Peptide Sequence

PEP ID

Os12t0207200-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:5596782:5598867:1 gene:Os12g0207200 transcript:Os12t0207200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb/SANT-like domain domain containing protein. (Os12t0207200-01)
Sequence

IRLSSTTAPPDLAPPPPPPPCTVSPPAASTRTARCPPHHQERKMTEAAEWNDENTKIICE
LYAEQVRAGNRPSTHLNSIGYSQVALKFQQRTHLLYTKRQLKNKWDKLRNEYTIWKKLLI
RGSGLGWDSTKGTIAADENWWNKTNTELPGAKKFRKAGMKNLDHLRVMFDDIASNGVDHT
PVPATSSPSTLESPVNVANLDGLDNDMEDNDDTQLEEESPLNRNKKRPRHANNANKNKSS
RTEIALLMQAQLKGMADLAEKAQATFENFTSLVGSLGSSIQYVMTLVQECGARSGSDEHF
IATELFVSREQREMFLTLSTAEERLEWLRRKYKAKYGA

Transcript Sequence

Transcript ID

Os12t0207200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:5596782:5598867:1 gene:Os12g0207200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Myb/SANT-like domain domain containing protein. (Os12t0207200-01)
Sequence

AATTCGGCTCAGCTCCACCACCGCTCCTCCCGACCTAGCGCCGCCGCCGCCGCCGCCGCC
CTGCACCGTCTCCCCGCCGGCCGCCTCCACCCGCACCGCGCGGTGCCCCCCTCATCACCA
AGAACGGAAGATGACAGAAGCTGCTGAGTGGAATGATGAGAACACTAAAATTATCTGTGA
ACTTTATGCTGAACAAGTTCGGGCTGGAAATCGACCAAGTACTCATCTCAACAGCATTGG
ATACAGCCAAGTTGCATTGAAGTTTCAGCAGAGAACTCATTTGCTTTACACCAAGAGACA
ACTTAAAAACAAATGGGATAAACTTAGGAATGAGTACACCATCTGGAAGAAATTGCTTAT
AAGAGGGTCAGGTTTAGGTTGGGACAGTACAAAAGGAACAATTGCAGCTGACGAAAACTG
GTGGAACAAGACAAATACAGAGTTGCCAGGTGCAAAAAAATTCCGCAAAGCTGGAATGAA
AAATCTGGATCATTTGAGAGTGATGTTTGATGATATTGCCAGTAACGGTGTGGATCATAC
ACCGGTGCCAGCAACAAGTTCGCCATCTACTCTGGAAAGTCCTGTAAATGTTGCTAATCT
TGACGGACTAGACAATGACATGGAAGATAATGATGACACTCAGCTGGAAGAGGAGTCTCC
CTTGAATCGGAACAAGAAAAGACCTCGCCATGCTAATAATGCTAACAAGAACAAGAGTAG
TAGGACTGAAATTGCTTTGCTCATGCAAGCTCAATTGAAGGGTATGGCAGATTTGGCCGA
GAAAGCACAGGCCACTTTTGAGAATTTCACCTCCCTTGTTGGCTCTCTAGGATCCAGCAT
TCAGTATGTTATGACATTGGTTCAAGAATGTGGAGCACGGAGTGGAAGCGACGAGCATTT
CATTGCAACTGAGTTGTTTGTCAGTAGAGAACAAAGAGAAATGTTCTTGACTCTGAGTAC
CGCTGAGGAGCGTCTAGAATGGCTTAGAAGAAAGTATAAAGCTAAGTATGGTGCTTAAGA
AATATGATCGCGGAGCTTCCTGACATCGTTTCACTTGGCTCTTGTTGCCTTAGGTATTCA
AGACTATTTTTCTTTTCTTTTGTATCGGATGCTAGCATGTATTAGATCCTGACAAGTGTG
ATCGTCAACCTGTGGGTGTAAAGGCTGATCTATGAATGTACAATC