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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0206800-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:5569644:5573023:-1 gene:Os12g0206800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 33 description:Transcription factor, MADS-box domain containing protein. (Os12t0206800-00)
Sequence

ATGGTCAGAGGAAAGGTGCAAATGCGACGAATAGAGAACCCTGTCCACAGACAGGTAACC
TTCTGTAAGCGCCGTGGGGGGCTCCTCAAGAAGGCCAGGGAACTATCAGTGCTTTGTGAT
GCTGATGTAGGTGTTATCATATTCTCCTCTCAGGGAAAACTCCATGAATTAGCTACTAAT
GGAAATATGCATAACTTGGTTGAAAGGTACCAGAGCAATGTAGCAGGTGGTCAAATGGAA
CCAGGAGCTCTACAAAGACAGCAGGTAGCAGAACAAGGGATTTTCTTGTTAAGGGAAGAA
ATAGATCTACTACAGAGGGGTCTTAGGTCTACATATGGAGGGGGAGCAGGGGAAATGACA
CTAGATAAATTGCATGCACTAGAGAAAGGTCTTGAACTATGGATTTACCAAATACGCACA
ACAAAGATGCAGATGATGCAACAAGAGATTCAATTTCTTAGAAACAAGGAAGGCATACTA
AAAGAAGCAAATGAAATGCTTCAAGAGAAGGTGAAAGAACAGCAAAAGCTATACATGTCT
TTGTTGGATCTCCATAGTCAACAACCAACACAACCAATGACCTACGGAAATCGCTTCTTC
TCAATCTAG

Peptide Sequence

PEP ID

Os12t0206800-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:5569644:5573023:-1 gene:Os12g0206800 transcript:Os12t0206800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 33 description:Transcription factor, MADS-box domain containing protein. (Os12t0206800-00)
Sequence

MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN
GNMHNLVERYQSNVAGGQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMT
LDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKEQQKLYMS
LLDLHSQQPTQPMTYGNRFFSI

Transcript Sequence

Transcript ID

Os12t0206800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:5569644:5573023:-1 gene:Os12g0206800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MADS BOX GENE 33 description:Transcription factor, MADS-box domain containing protein. (Os12t0206800-00)
Sequence

ATGGTCAGAGGAAAGGTGCAAATGCGACGAATAGAGAACCCTGTCCACAGACAGGTAACC
TTCTGTAAGCGCCGTGGGGGGCTCCTCAAGAAGGCCAGGGAACTATCAGTGCTTTGTGAT
GCTGATGTAGGTGTTATCATATTCTCCTCTCAGGGAAAACTCCATGAATTAGCTACTAAT
GGAAATATGCATAACTTGGTTGAAAGGTACCAGAGCAATGTAGCAGGTGGTCAAATGGAA
CCAGGAGCTCTACAAAGACAGCAGGTAGCAGAACAAGGGATTTTCTTGTTAAGGGAAGAA
ATAGATCTACTACAGAGGGGTCTTAGGTCTACATATGGAGGGGGAGCAGGGGAAATGACA
CTAGATAAATTGCATGCACTAGAGAAAGGTCTTGAACTATGGATTTACCAAATACGCACA
ACAAAGATGCAGATGATGCAACAAGAGATTCAATTTCTTAGAAACAAGGAAGGCATACTA
AAAGAAGCAAATGAAATGCTTCAAGAGAAGGTGAAAGAACAGCAAAAGCTATACATGTCT
TTGTTGGATCTCCATAGTCAACAACCAACACAACCAATGACCTACGGAAATCGCTTCTTC
TCAATCTAGCCGTCAAAGGACCT