Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0199800-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:5184081:5186323:-1 gene:Os12g0199800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 76M13 description:Similar to Cyt-P450 monooxygenase. (Os12t0199800-01)
Sequence

ATGGCAAGTGGGTTGTGGTTTCTGGGGATATCACTTGCTGTCCTACTACTCTGTTACGTG
GGAACAAACAGAAGGGGTGATGGGCAGCGGCCGCCTGGCCCCAGGACGCTGCCCATAGTC
GGTAACCTACTCGACCTGCGCGGCGGCAACCTCCACCACAAACTCGCAAGCCTGGCTCAC
GCCCATGGCCCCGTGATGACGCTCAAGCTTGGCCTCGTCACCACCGTGTTCATCTCCTCG
CGCGACGCTGCGTGGGAAGCATTCGCCAAGCACGATCGGCGCCTTGCGGCGCGCACGGTC
CCGGACACGAGACGTGCGCTCGCGCACGCGGAACGATCAATGGTTTGGCTGCCGAGCTAC
GATCCTCTATGGAAGACCCTGCGCAGCATCGCGGTAACGCACGTCTTCTCGCCACGCAGT
CTCGGCGTGGCGCGCAGCGCCCGCGAGCGTAAGGTGCACGACATGGTGGACAGCTTCCGT
CGCCGCGCTGGGCAGGAGGTTGATATCGGCCAGGTCCTGTACCATGGCATGTTCGACCTC
CTGGCGAACGTGCTTCTCTCCGTCGATGCCCACCCCAATTTAAGGGATCTTATGGAGGAT
ATCGTTGCAATACTTGCGAAGCCGAACGCGTCCGATTTCTTCCCGCTGCTCCGGCCGCTA
GATTTGCAAGGCATTCGCCACTGGACGGCCATACACATGAGTCGAGTCCTCCATATCCTG
GACAGCATAATTGACTGCCGTTTAGCCCAGGGCACCGACGACCAGTGCAAGGATGTGCTG
GACTCTCTCCTTGTGCTCATGTCCACCGGCAAGCTCTCTCGCCGTGACGTGAAAATCCTT
TTGTTTGACATCCTTGCAGCAGGGACCGAGACGACCAAGATCACGGTGGAGTGGGCCATG
GCAGAACTGCTGCGCAACCCTAATGTGATGGCCACCACGCGAGCAGAGATGAAGGCCGCA
CTTGGAGGCAATGGGACGATCACGGAGGCCGATGTGGTGAACCTTCCGTACCTCCAGGCC
GCAGTGAAGGAGTCGATGCGGCTGCACCCTGTGGCACCCCTCCTGTTGCCGCACCTGGTG
GTCGAGGACGGCGTGAGGATCGGCGGCTACGCCGTGTCCAAGGGCACGACGGTGATCTTC
AACTCATGGGCGATAATGCGTGACTCTACCGCATGGGAGAGACCGGACGACTTCTTGCCG
GACCGTTTCTTGGGCAAGACGGAGCTGGACTTGTGGGGGAAGCAGGCCAAGTTTATTCCG
CTTGGGTCTGGCCGAAGGCTGTGCCCTGCTTTGCCAATGGTAGAGCTCGTCGTGCCATTT
ACAGTCGCGTCATTGCTGCATGCGTTCGAGTGGCACCTGCCCAAAGGCATGTCGGCTGAG
GAGGTGGACGTCACCGAGCGGTACACAAGCAACGATATCCTTGTTATGGCTACCCCTCTC
AAGGCTGTGCCCCTCATCGTCACCTAG

Peptide Sequence

PEP ID

Os12t0199800-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:5184081:5186323:-1 gene:Os12g0199800 transcript:Os12t0199800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 76M13 description:Similar to Cyt-P450 monooxygenase. (Os12t0199800-01)
Sequence

MASGLWFLGISLAVLLLCYVGTNRRGDGQRPPGPRTLPIVGNLLDLRGGNLHHKLASLAH
AHGPVMTLKLGLVTTVFISSRDAAWEAFAKHDRRLAARTVPDTRRALAHAERSMVWLPSY
DPLWKTLRSIAVTHVFSPRSLGVARSARERKVHDMVDSFRRRAGQEVDIGQVLYHGMFDL
LANVLLSVDAHPNLRDLMEDIVAILAKPNASDFFPLLRPLDLQGIRHWTAIHMSRVLHIL
DSIIDCRLAQGTDDQCKDVLDSLLVLMSTGKLSRRDVKILLFDILAAGTETTKITVEWAM
AELLRNPNVMATTRAEMKAALGGNGTITEADVVNLPYLQAAVKESMRLHPVAPLLLPHLV
VEDGVRIGGYAVSKGTTVIFNSWAIMRDSTAWERPDDFLPDRFLGKTELDLWGKQAKFIP
LGSGRRLCPALPMVELVVPFTVASLLHAFEWHLPKGMSAEEVDVTERYTSNDILVMATPL
KAVPLIVT

Transcript Sequence

Transcript ID

Os12t0199800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:5184081:5186323:-1 gene:Os12g0199800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 76M13 description:Similar to Cyt-P450 monooxygenase. (Os12t0199800-01)
Sequence

GTTGGATCCATATCTGACAAGTGGGAGGAGGGGGCTGAATGTTAGCTATTGGTGGTGTTT
GAAACTCATGTAAATGAAGATGAAAATTAAGTGTTTTACGTAAAATGAGGTGCTATTAAC
TTATGATTAATTAAGTTTTACATGAAACGCACCGTTTAGCAGTTTGAAAAGTGTGCCACG
AATATCTAACTTTTGTCGGAGAAAAGAACGGGGCCATAGTGACAAAAAAAATCTCCCACG
GTGATAGCGGAAGGTTGAGGAACGGACGAAACTGGCCTTGGAAAGCTCGAGGTATATAAC
TATATATATAGGGCGGGTACCATTCTTATGGTTTCAAATTAACTACAAGTCTGCAACGCA
CAAAATGGCAAGTGGGTTGTGGTTTCTGGGGATATCACTTGCTGTCCTACTACTCTGTTA
CGTGGGAACAAACAGAAGGGGTGATGGGCAGCGGCCGCCTGGCCCCAGGACGCTGCCCAT
AGTCGGTAACCTACTCGACCTGCGCGGCGGCAACCTCCACCACAAACTCGCAAGCCTGGC
TCACGCCCATGGCCCCGTGATGACGCTCAAGCTTGGCCTCGTCACCACCGTGTTCATCTC
CTCGCGCGACGCTGCGTGGGAAGCATTCGCCAAGCACGATCGGCGCCTTGCGGCGCGCAC
GGTCCCGGACACGAGACGTGCGCTCGCGCACGCGGAACGATCAATGGTTTGGCTGCCGAG
CTACGATCCTCTATGGAAGACCCTGCGCAGCATCGCGGTAACGCACGTCTTCTCGCCACG
CAGTCTCGGCGTGGCGCGCAGCGCCCGCGAGCGTAAGGTGCACGACATGGTGGACAGCTT
CCGTCGCCGCGCTGGGCAGGAGGTTGATATCGGCCAGGTCCTGTACCATGGCATGTTCGA
CCTCCTGGCGAACGTGCTTCTCTCCGTCGATGCCCACCCCAATTTAAGGGATCTTATGGA
GGATATCGTTGCAATACTTGCGAAGCCGAACGCGTCCGATTTCTTCCCGCTGCTCCGGCC
GCTAGATTTGCAAGGCATTCGCCACTGGACGGCCATACACATGAGTCGAGTCCTCCATAT
CCTGGACAGCATAATTGACTGCCGTTTAGCCCAGGGCACCGACGACCAGTGCAAGGATGT
GCTGGACTCTCTCCTTGTGCTCATGTCCACCGGCAAGCTCTCTCGCCGTGACGTGAAAAT
CCTTTTGTTTGACATCCTTGCAGCAGGGACCGAGACGACCAAGATCACGGTGGAGTGGGC
CATGGCAGAACTGCTGCGCAACCCTAATGTGATGGCCACCACGCGAGCAGAGATGAAGGC
CGCACTTGGAGGCAATGGGACGATCACGGAGGCCGATGTGGTGAACCTTCCGTACCTCCA
GGCCGCAGTGAAGGAGTCGATGCGGCTGCACCCTGTGGCACCCCTCCTGTTGCCGCACCT
GGTGGTCGAGGACGGCGTGAGGATCGGCGGCTACGCCGTGTCCAAGGGCACGACGGTGAT
CTTCAACTCATGGGCGATAATGCGTGACTCTACCGCATGGGAGAGACCGGACGACTTCTT
GCCGGACCGTTTCTTGGGCAAGACGGAGCTGGACTTGTGGGGGAAGCAGGCCAAGTTTAT
TCCGCTTGGGTCTGGCCGAAGGCTGTGCCCTGCTTTGCCAATGGTAGAGCTCGTCGTGCC
ATTTACAGTCGCGTCATTGCTGCATGCGTTCGAGTGGCACCTGCCCAAAGGCATGTCGGC
TGAGGAGGTGGACGTCACCGAGCGGTACACAAGCAACGATATCCTTGTTATGGCTACCCC
TCTCAAGGCTGTGCCCCTCATCGTCACCTAGTTACTGTTGGACCGTATGAGATATATATA
CTCGTTTATTGTATGGAAAATTTAAATAAAGTGTTGATGACAATAAAAACATGGCAAAAA
AAGGTCATGCTAAAATTTATCTTACTGTGTAGCGCATTTGCCCTGCCGGCAGTTTTGTAT
TTTTATTATTACTAGAAAAAAAAATAAATGTGCGTTGCAACGGGTAAAAACTTTTTTCCA
GTAATAAAATAGCTATTATGAGCTGATGAATAATTAAATTAAAACATTAGTATCGCTATA
CTTTAAAATTGAAAAGGCGTCTCCTACCTACCTCCCTTCATAGCCTGTCTCTCTTAACTT
CCAGTAGACAGTTATGTGCCTGTATGGTACCGGAGCCAATCATCCCTATCAAATCTATGA
TCTCCCAAAATTGATTGAGAGCT