Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0197700-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:5045169:5050440:-1 gene:Os12g0197700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Region of unknown function, putative Zinc finger, XS and XH domain containing protein. (Os12t0197700-01)
Sequence	ATGCCCGGCGGTCGCCGCGGCGGCGGCGGGCGTCCTGGCTCCGGCAGCAGCAGCAACGGC GGAGGCTCCGGGTATAGTTGGGTTGAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTGGA AAGGGACAATGCGCACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTATGGCGTGG CAAGCACGGAGTGGCAATGGATCTTTACACCCTCCTGGAAATGGTCGGGTTCAACATTCT GATCATAGGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAGAA ACAAAATTGCAAGCACCGTGTCCAGTTGTGACTGCACCTCTTGCAAATGGTTTGCAGTGG GTACCCAAGTCTCGCTCATCTGGTTCTGAGAGCAATATGGATGATGCTCCTACATCAGGT TCTGACCCTGAAATGGACAATGGTGCAACACACCCAGTTGTGACTGCAACTCTTGCAAAT GGCTTGCAGTGGGTGCCCAGGTCTCGCTCATCTGACTCTCAAAGCAACAAGGATGATGCT CCTACAGCTAGTTCTGACCCTGAAACGGACAATGTTGCACCACACCCAGTTGTAAGTGCA CCTGTTGCAAATGGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAATGGAC AATGGTGAGGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATACC AGTGGTGACTTTGATTCTAAGGCATCTGAGAAAAATTTTGAGACTCGAAAAAGGCACAAG CTGTTGAAAAGCATTTTTGAACTTCTGGAGAAGTTAAGTGTTGAACAGATAAATGAAAAG ACTAGGCAATGGCATTGTCCAGCATGCAAAAATGTACGTGGTGGAGTTACCTGGTACAAA GGGTTACAGCCTTTGATGAATCATGCTAGAACAAAGGGTTCTAAGAGGGTTAAGCTTCAC AGAGAATTGGCTGCATTACTGGAAGAGGAGCTGTATCGTACGGGAATTTCAATGGCATCA TCTGGCGAGTTCTTTGGAATCTGGAAAGGATTGCGAGAAAACACTGATCGTCCTATAGTA TGGCCCCCAGTGGTTATTATTATGAACACTCGATTGGAACAAGATAAGGATGGCAAGTGG AAAGGTATGGGAAACAAAGAGCTCCTTAGTTATTTCAGTAAATATCACGTGAAGGAAGCA TGCCATGCTTATGGCCCAGATGGGCACAGTGGCATGAGTGCGCTAATATTTGAAGGATCT GCCGTGGCCTATAAGGAGGCAGAACGGTTGCATAATCACTTTGTTGATCAAAGAACAGAC AAGTATGCGTGGTTGAATCATAGGATCGTCATACCTGGTGGGAAAAGGCAACTGTATGGT TTCTTAGCTGAAAAAGAAGACCTGGAGGCGTTCAATAGACATCATGGAAAAGACTATTTG AAATACGAGATGAAATCTTATAACGAGATGGTGGTTACCCAATTGAAGCAGATGAGTGAA GACAACCAACAACTGAATTATGTGAAGAATGAGATGGTTAAGACAGAGCGACATTCTAAA GAAGTAGAAGAAGCCTTGGGTGTTGAGACCCAGAAACTTCAGGGAGCAATTGAAGATAAT ATTATTTTGAAGAGAAAAACCAAGGAGATGCTCTCAGAGTGCGTGGAACAGATGGAGTTT AATGCGAAATTTTATCATGAACAAATTGAAAGACTTCGCAAGGACACCGAGGAGAAAGAG AATGAGTTTGAGAGGTTGCTGCAGGAGGAGCTAGCAAGAGCTATAGAGTGTGATGTTGAC TCTGAAACTACAGAAAATTGCAAGCTAAGGGAGGAACAGATACAAAGAATCATAGATTGC CAGGTGAAGGATGCGGAGGAGTTTGATGCTGAACAAGATGAATTGATCAAAACACACGAA GAGAAGAAGGCGAACGTCAAGATGGAGTATATGGCAAAGGATGTTGAGCTCGAGGAGGAG CTTTATGCCGCTCTCACAAGTCTGATGGAGAAACACAAGCCGGACATCTTCCAACCGTCC AGCCCTTGA

Peptide Sequence

PEP ID	Os12t0197700-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:5045169:5050440:-1 gene:Os12g0197700 transcript:Os12t0197700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Region of unknown function, putative Zinc finger, XS and XH domain containing protein. (Os12t0197700-01)
Sequence	MPGGRRGGGGRPGSGSSSNGGGSGYSWVEKKSKKSEKSVGKGQCAPCTSSNAAPKPAMAW QARSGNGSLHPPGNGRVQHSDHRPAARGSPRSLPQNKHTETKLQAPCPVVTAPLANGLQW VPKSRSSGSESNMDDAPTSGSDPEMDNGATHPVVTATLANGLQWVPRSRSSDSQSNKDDA PTASSDPETDNVAPHPVVSAPVANGLQWVPRSHSSGSEMDNGEDYDSYDDDSDDDMVDDT SGDFDSKASEKNFETRKRHKLLKSIFELLEKLSVEQINEKTRQWHCPACKNVRGGVTWYK GLQPLMNHARTKGSKRVKLHRELAALLEEELYRTGISMASSGEFFGIWKGLRENTDRPIV WPPVVIIMNTRLEQDKDGKWKGMGNKELLSYFSKYHVKEACHAYGPDGHSGMSALIFEGS AVAYKEAERLHNHFVDQRTDKYAWLNHRIVIPGGKRQLYGFLAEKEDLEAFNRHHGKDYL KYEMKSYNEMVVTQLKQMSEDNQQLNYVKNEMVKTERHSKEVEEALGVETQKLQGAIEDN IILKRKTKEMLSECVEQMEFNAKFYHEQIERLRKDTEEKENEFERLLQEELARAIECDVD SETTENCKLREEQIQRIIDCQVKDAEEFDAEQDELIKTHEEKKANVKMEYMAKDVELEEE LYAALTSLMEKHKPDIFQPSSP

Transcript Sequence

Transcript ID	Os12t0197700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:5045169:5050440:-1 gene:Os12g0197700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Region of unknown function, putative Zinc finger, XS and XH domain containing protein. (Os12t0197700-01)
Sequence	CCTGCTCTCCTCTGCTTCTCTTCTCCTCTCCTCTCCTCACCGGGAGAGTGGAGACCCTCG AGATGCCCGGCGGTCGCCGCGGCGGCGGCGGGCGTCCTGGCTCCGGCAGCAGCAGCAACG GCGGAGGCTCCGGGTATAGTTGGGTTGAGAAGAAGTCGAAGAAATCGGAGAAATCAGTTG GAAAGGGACAATGCGCACCATGTACTTCTTCAAATGCTGCACCTAAACCTGCTATGGCGT GGCAAGCACGGAGTGGCAATGGATCTTTACACCCTCCTGGAAATGGTCGGGTTCAACATT CTGATCATAGGCCTGCTGCCAGAGGCAGTCCTAGGTCACTGCCACAAAATAAGCATACAG AAACAAAATTGCAAGCACCGTGTCCAGTTGTGACTGCACCTCTTGCAAATGGTTTGCAGT GGGTACCCAAGTCTCGCTCATCTGGTTCTGAGAGCAATATGGATGATGCTCCTACATCAG GTTCTGACCCTGAAATGGACAATGGTGCAACACACCCAGTTGTGACTGCAACTCTTGCAA ATGGCTTGCAGTGGGTGCCCAGGTCTCGCTCATCTGACTCTCAAAGCAACAAGGATGATG CTCCTACAGCTAGTTCTGACCCTGAAACGGACAATGTTGCACCACACCCAGTTGTAAGTG CACCTGTTGCAAATGGCTTGCAGTGGGTACCCAGATCTCACTCATCTGGCTCTGAAATGG ACAATGGTGAGGATTATGATTCATATGACGATGATTCTGATGATGATATGGTTGATGATA CCAGTGGTGACTTTGATTCTAAGGCATCTGAGAAAAATTTTGAGACTCGAAAAAGGCACA AGCTGTTGAAAAGCATTTTTGAACTTCTGGAGAAGTTAAGTGTTGAACAGATAAATGAAA AGACTAGGCAATGGCATTGTCCAGCATGCAAAAATGTACGTGGTGGAGTTACCTGGTACA AAGGGTTACAGCCTTTGATGAATCATGCTAGAACAAAGGGTTCTAAGAGGGTTAAGCTTC ACAGAGAATTGGCTGCATTACTGGAAGAGGAGCTGTATCGTACGGGAATTTCAATGGCAT CATCTGGCGAGTTCTTTGGAATCTGGAAAGGATTGCGAGAAAACACTGATCGTCCTATAG TATGGCCCCCAGTGGTTATTATTATGAACACTCGATTGGAACAAGATAAGGATGGCAAGT GGAAAGGTATGGGAAACAAAGAGCTCCTTAGTTATTTCAGTAAATATCACGTGAAGGAAG CATGCCATGCTTATGGCCCAGATGGGCACAGTGGCATGAGTGCGCTAATATTTGAAGGAT CTGCCGTGGCCTATAAGGAGGCAGAACGGTTGCATAATCACTTTGTTGATCAAAGAACAG ACAAGTATGCGTGGTTGAATCATAGGATCGTCATACCTGGTGGGAAAAGGCAACTGTATG GTTTCTTAGCTGAAAAAGAAGACCTGGAGGCGTTCAATAGACATCATGGAAAAGACTATT TGAAATACGAGATGAAATCTTATAACGAGATGGTGGTTACCCAATTGAAGCAGATGAGTG AAGACAACCAACAACTGAATTATGTGAAGAATGAGATGGTTAAGACAGAGCGACATTCTA AAGAAGTAGAAGAAGCCTTGGGTGTTGAGACCCAGAAACTTCAGGGAGCAATTGAAGATA ATATTATTTTGAAGAGAAAAACCAAGGAGATGCTCTCAGAGTGCGTGGAACAGATGGAGT TTAATGCGAAATTTTATCATGAACAAATTGAAAGACTTCGCAAGGACACCGAGGAGAAAG AGAATGAGTTTGAGAGGTTGCTGCAGGAGGAGCTAGCAAGAGCTATAGAGTGTGATGTTG ACTCTGAAACTACAGAAAATTGCAAGCTAAGGGAGGAACAGATACAAAGAATCATAGATT GCCAGGTGAAGGATGCGGAGGAGTTTGATGCTGAACAAGATGAATTGATCAAAACACACG AAGAGAAGAAGGCGAACGTCAAGATGGAGTATATGGCAAAGGATGTTGAGCTCGAGGAGG AGCTTTATGCCGCTCTCACAAGTCTGATGGAGAAACACAAGCCGGACATCTTCCAACCGT CCAGCCCTTGAAGAGCTGCAGGCTTGCAGCTCACCATATATATGCCCTGCTCACAATAAT CTCAAGAGGTCCCTCTCCCAAATGAACTTCAATTTACATGCCGATAAATTGCTTGAAATG CTCAGAAACTCTCCCGAGTGGCGTCTCTGGGCAATTGTGTTGCACCCCCAATTTGGTGTT TTGATCTGCAATTTTTATGCATCTGCAAAGGTCAATTTGATTGAGTTGACAAGAATACCT GTTGCTCAACTCAAAGATGATGTGCTATTCTTGTCAAACATATAACTCTACACGGTTTTG ATTTCACTTGCAAGTTTGTGAAAATAAAAGTAAAACAGATGGTTTTACTTTGCAAGTAAA AGAATTTCGGAACTGCCAAGTCCGTCCCTAATATTTCTAGAGATTCAGAAACATCACATG TTTTTGGGTTACTGCAAGCATGGTTTGAAGTTTGGACTTCATTTTGGAATG