Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0197100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:5013789:5018308:-1 gene:Os12g0197100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoribosylamine-glycine ligase description:Pre-ATP-grasp fold domain containing protein. (Os12t0197100-01)
Sequence

ATGGCATGTGCTGCTTCGAGTGTAAAAGGTTCTCTCAACGTTGGAGGAGCTAAGGCATTC
AGCAATAATTTGTTTCGTGATTACTTGAAATCTTCGGTGTCTTATCCCGTTTCAGAGATT
TCTTCTCCCATCAGAGCGCAACATGTAGCATATGGTTCGAATCTCATTGTTAGGGGTTCT
AAGAGCAGGGACTTTAGCTCGAAGCTCGCATCGACAAACGGCAGCTCGAAGATTTCTGAA
GAGAGGGTAACTGTATTGGTCATTGGTGGAGGAGGAAGGGAGCATGCTCTTTGTTATGCC
TTGGAGCGCTCTCCATCCTGTGATGCAGTCTTCTGTGCCCCTGGTAACTCTGGCATTGCT
CAATCTGGAGATGCTACATGTATACCGGACCTGGACATATCGAACAGCGACGCGGTCATC
TCGTTCTGTCGCAACTGGGGAGTCGGGTTGGTTGTAGTTGGGCCTGAAGCACCCCTTGTT
GCTGGCCTTGCAAATGAGCTTGTCAAAGCTGGGATACCTACTTTTGGTCCTTCATCAGAG
GCTGCAGCGTTAGAAGGGTCAAAAGACTTCATGAAGAAGTTGTGTGATAAGTACCACATT
CCCACCGCAAAGTACCAATCTTTCACAGATCCTTCAGATGCTAAGAAATATGTTGAGGAG
CAAGGAGCCCCTATTGTTGTTAAAGCCGATGGATTGGCAGCTGGGAAAGGTGTAGTTGTT
GCTATGACTTTGGAAAAGGCATTTGAAGCAATAGACTCTATGCTGGTTGAAGGTTCATTC
GGTTCTGCTGGGTCACGGGTAATAGTTGAAGAATATTTAGAGGGGGAGGAGGTTTCTTTC
TTTGCTCTAGTGGATGGAGAAACTGCTTTGCCTCTTGAATCAGCCCAGGACCATAAAAGA
GTTGGTGATGGCGATGTTGGTCCAAATACAGGTGGTATGGGTGCATACTCCCCTGCACCA
ATAGTGACGGAAAAACTCAAGTGCAAAGTGATGGAGAGCATCATTGTCCCGACTGTTAAA
GGTATGGCAACTGAAGGATGCAAGTTCGTCGGTGTGTTGTATGCTGGGATCATGATTGAG
AAGAAATCGGGACTGCCAAAGCTTATTGAATACAATGTGCGATTTGGTGATCCAGAATGT
CAGGTTCTGATGATGCGGTTACAATCCGACCTCGCACAGGTCTTGCTTGCTGCATGTAGG
GGAGAACTGGGGTCAGTCTCACTAACCTGGTCGCCTGAATTGGCAACTGTGGTTGTGATG
GCAAGTGAAGGTTACCCTGGTGTTTACAAGAAGGGGACAGTAATAAAAAATATCGATGAA
GCTGAGCAGGTCTCTCCTGCAGTTAAGATCTTTCATGCTGGAACTGCCCTAGATCGAGAT
GGAAACTTCGTCGCGGCAGGAGGCCGTGTTCTTGGTGTAACCGCGAAAGGTAAGGACATT
GAGGAAGCAAGGGCAAAAGCATATGACGCTCTCGACGTTGTCGACTGGCCAGAAGGATTT
TTCAGGCATGACATTGGTTGGAGAGCACAGAAATATCGGCGCATGGTTGCACACTGA

Peptide Sequence

PEP ID

Os12t0197100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:5013789:5018308:-1 gene:Os12g0197100 transcript:Os12t0197100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoribosylamine-glycine ligase description:Pre-ATP-grasp fold domain containing protein. (Os12t0197100-01)
Sequence

MACAASSVKGSLNVGGAKAFSNNLFRDYLKSSVSYPVSEISSPIRAQHVAYGSNLIVRGS
KSRDFSSKLASTNGSSKISEERVTVLVIGGGGREHALCYALERSPSCDAVFCAPGNSGIA
QSGDATCIPDLDISNSDAVISFCRNWGVGLVVVGPEAPLVAGLANELVKAGIPTFGPSSE
AAALEGSKDFMKKLCDKYHIPTAKYQSFTDPSDAKKYVEEQGAPIVVKADGLAAGKGVVV
AMTLEKAFEAIDSMLVEGSFGSAGSRVIVEEYLEGEEVSFFALVDGETALPLESAQDHKR
VGDGDVGPNTGGMGAYSPAPIVTEKLKCKVMESIIVPTVKGMATEGCKFVGVLYAGIMIE
KKSGLPKLIEYNVRFGDPECQVLMMRLQSDLAQVLLAACRGELGSVSLTWSPELATVVVM
ASEGYPGVYKKGTVIKNIDEAEQVSPAVKIFHAGTALDRDGNFVAAGGRVLGVTAKGKDI
EEARAKAYDALDVVDWPEGFFRHDIGWRAQKYRRMVAH

Transcript Sequence

Transcript ID

Os12t0197100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:5013789:5018308:-1 gene:Os12g0197100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoribosylamine-glycine ligase description:Pre-ATP-grasp fold domain containing protein. (Os12t0197100-01)
Sequence

AGCCGTCTGTCTCATCGATCGATTGATTCCTCGTGTCTCCGTATATTCGATCACCGCGAT
TCATCCTTCTTGCAGAAGAAAGAATCATGGCATGTGCTGCTTCGAGTGTAAAAGGTTCTC
TCAACGTTGGAGGAGCTAAGGCATTCAGCAATAATTTGTTTCGTGATTACTTGAAATCTT
CGGTGTCTTATCCCGTTTCAGAGATTTCTTCTCCCATCAGAGCGCAACATGTAGCATATG
GTTCGAATCTCATTGTTAGGGGTTCTAAGAGCAGGGACTTTAGCTCGAAGCTCGCATCGA
CAAACGGCAGCTCGAAGATTTCTGAAGAGAGGGTAACTGTATTGGTCATTGGTGGAGGAG
GAAGGGAGCATGCTCTTTGTTATGCCTTGGAGCGCTCTCCATCCTGTGATGCAGTCTTCT
GTGCCCCTGGTAACTCTGGCATTGCTCAATCTGGAGATGCTACATGTATACCGGACCTGG
ACATATCGAACAGCGACGCGGTCATCTCGTTCTGTCGCAACTGGGGAGTCGGGTTGGTTG
TAGTTGGGCCTGAAGCACCCCTTGTTGCTGGCCTTGCAAATGAGCTTGTCAAAGCTGGGA
TACCTACTTTTGGTCCTTCATCAGAGGCTGCAGCGTTAGAAGGGTCAAAAGACTTCATGA
AGAAGTTGTGTGATAAGTACCACATTCCCACCGCAAAGTACCAATCTTTCACAGATCCTT
CAGATGCTAAGAAATATGTTGAGGAGCAAGGAGCCCCTATTGTTGTTAAAGCCGATGGAT
TGGCAGCTGGGAAAGGTGTAGTTGTTGCTATGACTTTGGAAAAGGCATTTGAAGCAATAG
ACTCTATGCTGGTTGAAGGTTCATTCGGTTCTGCTGGGTCACGGGTAATAGTTGAAGAAT
ATTTAGAGGGGGAGGAGGTTTCTTTCTTTGCTCTAGTGGATGGAGAAACTGCTTTGCCTC
TTGAATCAGCCCAGGACCATAAAAGAGTTGGTGATGGCGATGTTGGTCCAAATACAGGTG
GTATGGGTGCATACTCCCCTGCACCAATAGTGACGGAAAAACTCAAGTGCAAAGTGATGG
AGAGCATCATTGTCCCGACTGTTAAAGGTATGGCAACTGAAGGATGCAAGTTCGTCGGTG
TGTTGTATGCTGGGATCATGATTGAGAAGAAATCGGGACTGCCAAAGCTTATTGAATACA
ATGTGCGATTTGGTGATCCAGAATGTCAGGTTCTGATGATGCGGTTACAATCCGACCTCG
CACAGGTCTTGCTTGCTGCATGTAGGGGAGAACTGGGGTCAGTCTCACTAACCTGGTCGC
CTGAATTGGCAACTGTGGTTGTGATGGCAAGTGAAGGTTACCCTGGTGTTTACAAGAAGG
GGACAGTAATAAAAAATATCGATGAAGCTGAGCAGGTCTCTCCTGCAGTTAAGATCTTTC
ATGCTGGAACTGCCCTAGATCGAGATGGAAACTTCGTCGCGGCAGGAGGCCGTGTTCTTG
GTGTAACCGCGAAAGGTAAGGACATTGAGGAAGCAAGGGCAAAAGCATATGACGCTCTCG
ACGTTGTCGACTGGCCAGAAGGATTTTTCAGGCATGACATTGGTTGGAGAGCACAGAAAT
ATCGGCGCATGGTTGCACACTGATAGGCATGTACTGTAAATCTGTAACTATGTTATGTTT
GTGATGTTAATGGGAATACAGCGACAGGGGAATGGGCATAATATTTAAGTAGTGGATGCA
TGGAGATGGAAGTAATTGGCAGCTTGGATTAGTTCCTTGATCGAGGAACACGTTCTTCTC
ATCACTAGTTTCTTTTTGGTAGTACATGTGTTTATATTTTCACCTTCTGTATTGTAATAA
GAACTGGTGTGGACCAATGATGAATGCAACTTGCTTATCAATATACTCCCTCCCTTTTTT