Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0194800-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:4863276:4874888:1 gene:Os12g0194800 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase family protein. (Os12t0194800-01);Similar to Pseudouridylate synthase. (Os12t0194800-02)
Sequence	ATGAGCGCCGCCACCCCCGACTCCGCCGCCGCCGCCAAGCGCCCCATCGACCCCTCCCAC GCCGACCCGTCGCCGGCGGCGAAGCTCCAGAGGTCGTCCCCGCCGGATCCCTCGCCGCCG GCTGAGGCGCAGGGCGACGCCACTGACGGCGGCGGCGAAGTGGCTGGGGTGAGAAGCGGG GAGATGGCCGGCGCGCGGAACCCTCAGGCGCAGCGGTACCTGGTCGCCGTGGAGTACGTC GGCACCCGGTTCTCCGGCTCCCAGCAGCAGCTCAACCAGCGCACCGTCGTCGGCGTCCTC GAGGAGGCATTTCACAAATTCATTGGTCAGCCAGTCTCAATCTTCTGTTCTAGTCGAACG GACACAGGTGTTCATGCTTTATCAAATGTTTGTCATGTTGACGTGGAGCGGATAAGTAAA AGAAAGCCTGGTGAAATGTTGCCACCTCATGAGCCTGGAGTTGTAAAACGTGCAGTGAAC CATTTTCTACAGAAGAATGAAGGTGACATAATGGTGACTGATGTCCGTTGTGTTGCACCA GACTTCCATGCTAGATACAAAGCCCTAGAGCGCACGTACCACTATCGTTTGCTTTCTGGA TCTGAGCCACTATCAGTTTTTGAGAAAACCTCTGCTTGGCACATACCCGAGGATTTAAAT GTACAGGCAATGAAGAAAGCGTGCAGCATACTTGTTGGGCATCATGATTTCAGTTCATTT CGAGCAACTGGATGTCAGGCAAACTCTCCCATGAGAACTTTGGATGAGCTTAGTGTTACA GAAGTATTTCCTTCCATGTTTTTTCCTTCAAGCATGGAGCGATCAGAGATGGAGTCATTA GATGGGCATCTTGTTTATTCAAGAACGTCAGTTGTGGAATCTTCTGGAAAAGGATCTGAT GCTTCTAGTACAAGTGAGCAATCAAGATTTGAGAATGGAGAAGAATTTGGAAAGAGGCTA AGGCATCGTTGCTTCGTTGTTACTGCACGGGCACGTTCATTTCTTTACCACCAGGTAAGG TTAATGGTTGGTCTTCTAAAATCTGTTGGTACTGGAGATCTAACAACTGAAGATGTTGAG AGAATTCTGAATTTAAAGGCAGTGACTGCGGCACCTCCTATGGCACCTGCTTGTGGTCTC TACCTTGCCAACGTGAAATATGACCTGAGCGTTTGA

Peptide Sequence

PEP ID	Os12t0194800-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:4863276:4874888:1 gene:Os12g0194800 transcript:Os12t0194800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase family protein. (Os12t0194800-01);Similar to Pseudouridylate synthase. (Os12t0194800-02)
Sequence	MSAATPDSAAAAKRPIDPSHADPSPAAKLQRSSPPDPSPPAEAQGDATDGGGEVAGVRSG EMAGARNPQAQRYLVAVEYVGTRFSGSQQQLNQRTVVGVLEEAFHKFIGQPVSIFCSSRT DTGVHALSNVCHVDVERISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRCVAP DFHARYKALERTYHYRLLSGSEPLSVFEKTSAWHIPEDLNVQAMKKACSILVGHHDFSSF RATGCQANSPMRTLDELSVTEVFPSMFFPSSMERSEMESLDGHLVYSRTSVVESSGKGSD ASSTSEQSRFENGEEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTEDVE RILNLKAVTAAPPMAPACGLYLANVKYDLSV

Transcript Sequence

Transcript ID	Os12t0194800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:4863276:4874888:1 gene:Os12g0194800 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase family protein. (Os12t0194800-01);Similar to Pseudouridylate synthase. (Os12t0194800-02)
Sequence	AGAGCCCTCGCAGAACCCTCACTCTCTCATGCCGCAATCACCATGAGCGCCGCCACCCCC GACTCCGCCGCCGCCGCCAAGCGCCCCATCGACCCCTCCCACGCCGACCCGTCGCCGGCG GCGAAGCTCCAGAGGTCGTCCCCGCCGGATCCCTCGCCGCCGGCTGAGGCGCAGGGCGAC GCCACTGACGGCGGCGGCGAAGTGGCTGGGGTGAGAAGCGGGGAGATGGCCGGCGCGCGG AACCCTCAGGCGCAGCGGTACCTGGTCGCCGTGGAGTACGTCGGCACCCGGTTCTCCGGC TCCCAGCAGCAGCTCAACCAGCGCACCGTCGTCGGCGTCCTCGAGGAGGCATTTCACAAA TTCATTGGTCAGCCAGTCTCAATCTTCTGTTCTAGTCGAACGGACACAGGTGTTCATGCT TTATCAAATGTTTGTCATGTTGACGTGGAGCGGATAAGTAAAAGAAAGCCTGGTGAAATG TTGCCACCTCATGAGCCTGGAGTTGTAAAACGTGCAGTGAACCATTTTCTACAGAAGAAT GAAGGTGACATAATGGTGACTGATGTCCGTTGTGTTGCACCAGACTTCCATGCTAGATAC AAAGCCCTAGAGCGCACGTACCACTATCGTTTGCTTTCTGGATCTGAGCCACTATCAGTT TTTGAGAAAACCTCTGCTTGGCACATACCCGAGGATTTAAATGTACAGGCAATGAAGAAA GCGTGCAGCATACTTGTTGGGCATCATGATTTCAGTTCATTTCGAGCAACTGGATGTCAG GCAAACTCTCCCATGAGAACTTTGGATGAGCTTAGTGTTACAGAAGTATTTCCTTCCATG TTTTTTCCTTCAAGCATGGAGCGATCAGAGATGGAGTCATTAGATGGGCATCTTGTTTAT TCAAGAACGTCAGTTGTGGAATCTTCTGGAAAAGGATCTGATGCTTCTAGTACAAGTGAG CAATCAAGATTTGAGAATGGAGAAGAATTTGGAAAGAGGCTAAGGCATCGTTGCTTCGTT GTTACTGCACGGGCACGTTCATTTCTTTACCACCAGGTAAGGTTAATGGTTGGTCTTCTA AAATCTGTTGGTACTGGAGATCTAACAACTGAAGATGTTGAGAGAATTCTGAATTTAAAG GCAGTGACTGCGGCACCTCCTATGGCACCTGCTTGTGGTCTCTACCTTGCCAACGTGAAA TATGACCTGAGCGTTTGAAGGCAGATTTCTGAAATGACCACAAGTTATGTCATGTTTTGT CTTTCAGAGGCCCATGTGTTTGAATTATTGAAATACTGAGTAGAGAGGTCCAGACGCACC TTGGAAAGGAAAATGCTTTCTCATGGTCCGAATTTTGTGCAAATCTGGAAAATTTTCCCC GATATTTATAAGATACTTTTGTGCACATGATGGAAGGACATGTATTTCCATGTTCTCATT AGTTTCGACTCCTATGTATTCAGATTATCAGATGTCAAGTCGCATAACATTCTCTATTGA ATGTATGCACAAAGTTCTAGATCCTAGGACAAATTAAACTGTATATGTAAACTAGAGTGG CAGCTGACCCTTCCTTGATTATGCCTTATATTGTTTCATCTTCATTTCACACAGCACATA CATTATGCAAACTGCATTGCATGGAATACATTTCACCTTCAATTCATACATTTGATCTG