Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0190200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:4556144:4558043:-1 gene:Os12g0190200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Thylakoid lumenal 29.8 kDa protein, chloroplast precursor. (Os12t0190200-01);Similar to tat pathway signal sequence family protein. (Os12t0190200-02)
Sequence	ATGCTTCTTGCAGAGATGATGAACAGCTCAGTGCTGTTCTTGCCAAGCTCATCCCTGTTC CTCACAAAGCAGCTGGTACCTGCAACCAAGGGCAGAGCATCAGCAGCAGCTGCTGTTAGG TGCAGCAGTGGGCCCAATCTGTCAGAAGCACATGAGGAGGAGGATGGTGTAGCCTCCTTG ATGGGGAGGAGGCATGCAATGGCTTCTGCTGCTGCTGCCTGTGGAGTTTCAGTGTTTGGT TTTGCAGGTGAGAGCATGGCAGTGAAGCAGGGCCTTCTGGCTGGGCGGATCCCTGGGCTC TCTGACCCTGATGAAAAAGGTTGGAGAACATACCGTAGGCCAGACGACAAGTCCGGTGGA CATGGAGTTGGATGGAGCCCAATCATTCCCTACAGCTTCAAAGTTCGTGATGGCTGGGAA GAGGTCCCGGTGTCGATTGCTGATCTTGGTGGCACCGAGATCGACCTGCGGTTTGCGAAT TCCAAGCAGGGACGTTTGTTCGTCGTTGTAGCACCGGTTCGCAGGTTTGCAGAACTCGAC GATGCGACAATTGAAAAGATCGGTACACCGGAGAAGGTGATCGACGCCTTCGGACCAGAG GTGATCGGTGAAAATGTTGAAGGGAAGGTTTTGTCCATGGCAACAGCAGAGTATTCAGGA AGAACTTACTACCAGTTTGAGCTGGAACCACCTCATATCTTCATCACTGCAACTGCCGCT GGAAACAGGCTCTACCTGTTCAATGTAACTGCAAATGGGCTACAATGGAAGAGGAATTAC AATGACCTGAAGCAAATAGCTGAATCATTTCGTGTTGTCTAG

Peptide Sequence

PEP ID	Os12t0190200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:4556144:4558043:-1 gene:Os12g0190200 transcript:Os12t0190200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Thylakoid lumenal 29.8 kDa protein, chloroplast precursor. (Os12t0190200-01);Similar to tat pathway signal sequence family protein. (Os12t0190200-02)
Sequence	MLLAEMMNSSVLFLPSSSLFLTKQLVPATKGRASAAAAVRCSSGPNLSEAHEEEDGVASL MGRRHAMASAAAACGVSVFGFAGESMAVKQGLLAGRIPGLSDPDEKGWRTYRRPDDKSGG HGVGWSPIIPYSFKVRDGWEEVPVSIADLGGTEIDLRFANSKQGRLFVVVAPVRRFAELD DATIEKIGTPEKVIDAFGPEVIGENVEGKVLSMATAEYSGRTYYQFELEPPHIFITATAA GNRLYLFNVTANGLQWKRNYNDLKQIAESFRVV

Transcript Sequence

Transcript ID	Os12t0190200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:4556144:4558043:-1 gene:Os12g0190200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Thylakoid lumenal 29.8 kDa protein, chloroplast precursor. (Os12t0190200-01);Similar to tat pathway signal sequence family protein. (Os12t0190200-02)
Sequence	GAAAAACAAGAAGCAAAAAAATTATTCAAGAAACATCATAGAGCCAGAGCTAGAGCATCA CAGAGAAAGAAGAACTTGCTCCCAATAAACTATCCATGCTTCTTGCAGAGATGATGAACA GCTCAGTGCTGTTCTTGCCAAGCTCATCCCTGTTCCTCACAAAGCAGCTGGTACCTGCAA CCAAGGGCAGAGCATCAGCAGCAGCTGCTGTTAGGTGCAGCAGTGGGCCCAATCTGTCAG AAGCACATGAGGAGGAGGATGGTGTAGCCTCCTTGATGGGGAGGAGGCATGCAATGGCTT CTGCTGCTGCTGCCTGTGGAGTTTCAGTGTTTGGTTTTGCAGGTGAGAGCATGGCAGTGA AGCAGGGCCTTCTGGCTGGGCGGATCCCTGGGCTCTCTGACCCTGATGAAAAAGGTTGGA GAACATACCGTAGGCCAGACGACAAGTCCGGTGGACATGGAGTTGGATGGAGCCCAATCA TTCCCTACAGCTTCAAAGTTCGTGATGGCTGGGAAGAGGTCCCGGTGTCGATTGCTGATC TTGGTGGCACCGAGATCGACCTGCGGTTTGCGAATTCCAAGCAGGGACGTTTGTTCGTCG TTGTAGCACCGGTTCGCAGGTTTGCAGAACTCGACGATGCGACAATTGAAAAGATCGGTA CACCGGAGAAGGTGATCGACGCCTTCGGACCAGAGGTGATCGGTGAAAATGTTGAAGGGA AGGTTTTGTCCATGGCAACAGCAGAGTATTCAGGAAGAACTTACTACCAGTTTGAGCTGG AACCACCTCATATCTTCATCACTGCAACTGCCGCTGGAAACAGGCTCTACCTGTTCAATG TAACTGCAAATGGGCTACAATGGAAGAGGAATTACAATGACCTGAAGCAAATAGCTGAAT CATTTCGTGTTGTCTAGGGTTTAAATAAATTGCTCACGATGTATCTGTTTATGTGCATAC CATTAGAGAAAATGAGGTGCTATTATACAGACTGCAGAGGGGCAATGAGTAAGAAAACAT AACTTTTGAATATGAGTTGTTAAAGCTGAAGCTTTTGAAC