Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0190000-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:4533084:4535144:-1 gene:Os12g0190000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDP-L-galactose phosphorylase description:Similar to VTC2. (Os12t0190000-01);Similar to VTC2. (Os12t0190000-02)
Sequence	CAACTGAATGAAGGACGCCACCTCAAGAAGCGCCCTACTGAATTCCGCGTGGACCGTGTG CTTCAACCATTTGATGCTGCCAAGTTCAACTTCACCAAAGTTGGCCAGGAGGAGGTGCTC TTCCAATTTGAGAATGGTGGTGGTGATGACAGCTTCTTTGTGGAGAGCTCCCCAATCAGT GTTGCTGATCGTGCTCCTAATGTTGTTGCAATCAATGTAAGCCCAATTGAATATGGCCAT GTTCTTCTCATTCCCCGTGTACTGGACCGCCTGCCTCAGAGGATTGACCAGGAGAGCTTC TTGCTTGCACTGCACATGGCTGCTGAAGCCGCAAGCCCATACTTCAGGCTTGGCTATAAT AGTTTGGGTGCCTTTGCAACCATCAACCACCTCCACTTTCAGGCATACTACTTGACAGTG CCTTTCCCTGTTGAGAAGGCAGCTACCAAGAGGATTTTCCTTGCTGAGGGCACAATGAAT AGTGGAGTAAAGGTGTCCAAGCTGATGAACTACCCTGTGAGGGGACTGGTTTTTGAGGGA GGCAACTCACTGAGCGATCTGGCCAATGTGGTTTCCAGCGCTTGTATCTGGCTGCAGGAC AACAATGTGCCTTACAATGTTCTTATCTCTGACTGCGGCAAAAAGATCTTCCTCTTCCCT CAGTGCTATGCCGAGAAGCAGGCTCTGGGAGAAGTGAGCCAGGAGCTACTGGACACGCAG GTTAACCCAGCTGTGTGGGAGATCAGTGGCCACATCGTGCTGAAACGAAGGAGTGATTAC GAGGAGGCATCAGAAGCTTCTGCGTGGAGACTCCTCGCTGAGGTTTCCCTGTCGGAGGAA CGCTTCGAGGAAGTGAAGGCCTACATCTTTGATGCCGCTGGTCTGGTTCAGTCCGACGAG GAGGAAGTCAGCGAAGACGAGGACGCCACCTACACGCCTGTCTCCATTGCCCCTCCTGCT GTCGCGGAAGGCTGCCTCGTCCTTCAGTGA

Peptide Sequence

PEP ID	Os12t0190000-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:4533084:4535144:-1 gene:Os12g0190000 transcript:Os12t0190000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDP-L-galactose phosphorylase description:Similar to VTC2. (Os12t0190000-01);Similar to VTC2. (Os12t0190000-02)
Sequence	QLNEGRHLKKRPTEFRVDRVLQPFDAAKFNFTKVGQEEVLFQFENGGGDDSFFVESSPIS VADRAPNVVAINVSPIEYGHVLLIPRVLDRLPQRIDQESFLLALHMAAEAASPYFRLGYN SLGAFATINHLHFQAYYLTVPFPVEKAATKRIFLAEGTMNSGVKVSKLMNYPVRGLVFEG GNSLSDLANVVSSACIWLQDNNVPYNVLISDCGKKIFLFPQCYAEKQALGEVSQELLDTQ VNPAVWEISGHIVLKRRSDYEEASEASAWRLLAEVSLSEERFEEVKAYIFDAAGLVQSDE EEVSEDEDATYTPVSIAPPAVAEGCLVLQ

Transcript Sequence

Transcript ID	Os12t0190000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:4533084:4535144:-1 gene:Os12g0190000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GDP-L-galactose phosphorylase description:Similar to VTC2. (Os12t0190000-01);Similar to VTC2. (Os12t0190000-02)
Sequence	ACAACTGAATGAAGGACGCCACCTCAAGAAGCGCCCTACTGAATTCCGCGTGGACCGTGT GCTTCAACCATTTGATGCTGCCAAGTTCAACTTCACCAAAGTTGGCCAGGAGGAGGTGCT CTTCCAATTTGAGAATGGTGGTGGTGATGACAGCTTCTTTGTGGAGAGCTCCCCAATCAG TGTTGCTGATCGTGCTCCTAATGTTGTTGCAATCAATGTAAGCCCAATTGAATATGGCCA TGTTCTTCTCATTCCCCGTGTACTGGACCGCCTGCCTCAGAGGATTGACCAGGAGAGCTT CTTGCTTGCACTGCACATGGCTGCTGAAGCCGCAAGCCCATACTTCAGGCTTGGCTATAA TAGTTTGGGTGCCTTTGCAACCATCAACCACCTCCACTTTCAGGCATACTACTTGACAGT GCCTTTCCCTGTTGAGAAGGCAGCTACCAAGAGGATTTTCCTTGCTGAGGGCACAATGAA TAGTGGAGTAAAGGTGTCCAAGCTGATGAACTACCCTGTGAGGGGACTGGTTTTTGAGGG AGGCAACTCACTGAGCGATCTGGCCAATGTGGTTTCCAGCGCTTGTATCTGGCTGCAGGA CAACAATGTGCCTTACAATGTTCTTATCTCTGACTGCGGCAAAAAGATCTTCCTCTTCCC TCAGTGCTATGCCGAGAAGCAGGCTCTGGGAGAAGTGAGCCAGGAGCTACTGGACACGCA GGTTAACCCAGCTGTGTGGGAGATCAGTGGCCACATCGTGCTGAAACGAAGGAGTGATTA CGAGGAGGCATCAGAAGCTTCTGCGTGGAGACTCCTCGCTGAGGTTTCCCTGTCGGAGGA ACGCTTCGAGGAAGTGAAGGCCTACATCTTTGATGCCGCTGGTCTGGTTCAGTCCGACGA GGAGGAAGTCAGCGAAGACGAGGACGCCACCTACACGCCTGTCTCCATTGCCCCTCCTGC TGTCGCGGAAGGCTGCCTCGTCCTTCAGTGAGACGGTAGAACAGGTTGTCGGCCTGGTAA AGCGCTGTGCCGCCTTCGTCTTCTCATCAGTCTTCTTCAGTCTTCACCCGCTGGTCGCCT AGCTTCGTCATAGTTATGGTTGCTGGTCTTTTATAAGGATCAATGTAATCGAACTGCCTG GAGTCTTGTGTCTGAACCTGCATGCTACTTGCTCCTCCCTTCCCTGCTGCTCTGATATTC AGACTCTGCAAATATTAAGCAGAGAAACTGTGAAACTGTTTGTATTGTTTGTGCTGTTGA GCACTGGATCTAATGTGATGAACATTGTTAAT