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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0183450-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:4220640:4221273:-1 gene:Os12g0183450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0104J13.2 protein. (Os12t0183450-00)
Sequence

ATGCTCAGCGGTGGTGGCAGGCAGCGGCAGCTCGCCGCGCTCAGGGAGATCAAGGCCATC
GCCACAGAGAGCGACCGCAACAAGCGCTGCGTCGAGGCTACGCCCGGTGCCGTTAAGTTC
CTCGTCTCCGTCGTCGTCCAGAGCCACGCCGCCGCCTCCACCTACACGTCGGCCAGGTCG
GACGATGACCTGCTCAACTCGGTGATCGATTCCCACATGTCGACGAGCTCGCCGAAGGAG
GAGGCCCTGGGCGTGCTCTACTCCCTCAAGCCGTCCGAGCCCACCCTGCGCCGTATCCTT
GGCAAGGACAATGGCGGCTTCCTCGACACCCTCGCCTCCGTCCTCCTTCTGAAGGCGATG
ACATCGGCGATGCCGCCGGAGCGGCTAGGCTGCCGCCCCCGACGTCGCAGCATCCGGAGC
CGAACCCCCTTACGCTGA

Peptide Sequence

PEP ID

Os12t0183450-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:4220640:4221273:-1 gene:Os12g0183450 transcript:Os12t0183450-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0104J13.2 protein. (Os12t0183450-00)
Sequence

MLSGGGRQRQLAALREIKAIATESDRNKRCVEATPGAVKFLVSVVVQSHAAASTYTSARS
DDDLLNSVIDSHMSTSSPKEEALGVLYSLKPSEPTLRRILGKDNGGFLDTLASVLLLKAM
TSAMPPERLGCRPRRRSIRSRTPLR

Transcript Sequence

Transcript ID

Os12t0183450-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:4220640:4221273:-1 gene:Os12g0183450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0104J13.2 protein. (Os12t0183450-00)
Sequence

GCAGCTGGCGCTGGCAGAGCGGGAGGCAACGCCCAACCACACGCTGCGGCGGGGTCATCC
AGGCATGGTGCGCCGCGCACTCCTTTGAGCGGTTCCCCACCCCGCACCCGCCCATCGACT
CCTGCCGCGTCGCCGCGCTCGTTGACGAGGGGACAACGATGCTCAGCGGTGGTGGCAGGC
AGCGGCAGCTCGCCGCGCTCAGGGAGATCAAGGCCATCGCCACAGAGAGCGACCGCAACA
AGCGCTGCGTCGAGGCTACGCCCGGTGCCGTTAAGTTCCTCGTCTCCGTCGTCGTCCAGA
GCCACGCCGCCGCCTCCACCTACACGTCGGCCAGGTCGGACGATGACCTGCTCAACTCGG
TGATCGATTCCCACATGTCGACGAGCTCGCCGAAGGAGGAGGCCCTGGGCGTGCTCTACT
CCCTCAAGCCGTCCGAGCCCACCCTGCGCCGTATCCTTGGCAAGGACAATGGCGGCTTCC
TCGACACCCTCGCCTCCGTCCTCCTTCTGAAGGCGATGACATCGGCGATGCCGCCGGAGC
GGCTAGGCTGCCGCCCCCGACGTCGCAGCATCCGGAGCCGAACCCCCTTACGCTGACTAT
GGCGAGCGTTCCTCGAAGAAGCAGGTGAGCCGAC