Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0182300-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:4178415:4182634:-1 gene:Os12g0182300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os12t0182300-01)
Sequence	ATGGGAGGCCAAGAACAGGTGGCCATGGCGGAGAGGAGGCCTTGTTACTGTCGCAACAAT GGCTTCTTGCTGCTGCTGGTACAAGTTCTCCTCTTCTTGTTCTTGTTTCTTGATTCGTCC ATGGTCGCCACTGCCGCGTCGGCGCCGGCACCGCTAAATACGACTCAGGTATCGATCATG AAGGAGCTTTCTGGCTTGGTTACTGCCAGTGCCAAGTGGAACACGAGCGATTCGAATCCA TGCCGATGGGATGGAGTGAGTTGCTCTTCTAGCTCCAATTCCATATCAGTTGTGACCAAC CTTACTTTGTCTGGGTATGGTTTGTCCAACTCCACCATATTTGCAACCATATGCTCTCTT GACACCTTGCAAATCCTTGATCTCTCTAAGAATTCCTTCACCAATTCGATAGAGCAATTC TTCACCTCTTCTTGCTCCATGAAGGCTGGATTGCGGTCACTTAATCTCAGCAGCAGCCAG CTATCCATGCCTCTTAGTAATTTCTCTGGTTTTCCCCTTCTTGAGGTTCTTGACTTGTCC TTCAATTCTTTCAGTGGTGATGTCAGAACCCAGTTGAGTTCTTTGCTCAAGCTGAGAAGC TTGAATCTTAGTAGCAATAACTTGGCTGGTGATGTTCCTACAAGCATGACCCCGTCTTTG GAGGAATTGGTGTTGTCCATCAACAATTTCAGTGGTAGCATTCCAATAGCTTTGTTCAAT TACCAAAATCTTACTATGCTGGATCTTAGTCAGAACAATCTAAATGGTGATGTACCGGAT GAGTTCTTAAAGTTACCCAAGCTCAAGACTTTGCTCTTATCAGGTAATCAACTGAGTGGC AATATACCTGTGAGTGTGTCAAATGTTGCAAGCCTTGCTCGGTTTGCAGCTAATCAGAAC AATTTTACCGGTTTCATCCCTAGTGGTATCACCAAGAATGTGAAGATGCTGGATCTGAGT TACAACGAACTTAGTGGAGTGATTCCCTCTGATATTCTTAGTCCTGTGGGACTGTGGACT GTTGATCTCACTCACAATAAGCTCGAAGGGCCCATCCCTAGCAGCTTGTCTCCGACCCTC TATCGGTTGAGGCTTGGTGGAGGCAACTCTCTCAATGGAACCATCCCGGCCACCATTGGT GATGCATCGACCTTGGCTTATCTTGAGCTGGATAGCAATCAGTTGACGGGAAGCATACCA TTGGAACTTGGCAGATGCAAGAGTTTGTCTTTGCTGAATCTGGCATCAAATAAGTTTCAG GGTCCAGTGCCTGATGCAATCAGCAGCCTTGACAAACTGGTAGTTCTTAAACTCCAAATG AACAATCTGGATGGACCTATCCCAAGTGTATTTTCTAATTTGACAAGCCTGATCACATTG AATCTTAGTGGTAATTCATTCACTGGAGGGATACCAAGAGAAATCGGCAAGCTGCCAAAG CTTTCCATTTTGAATTTGCAATGCAACAAGATCAGCGGCACCATTCCAGATTCACTCCAT TTATTAACTTCTCTAATTGAGCTCAATCTGGGGAATAATATCTTGACTGGTACCATCCCA ACAATGCCGACCAAATTGAGTACTGTTCTTAATCTAAGCCACAACAATCTCAGCGGATCT ATTCCTTCAAATATTGACTTATTGAGTGATCTAGAGATTCTTGATCTTTCATACAACAAC TTGTATGGTGAGGTGCCGGCCTCACTTGCAAAGCTAGAAAGCTTGACGCAACTAGTGCTT TCTTATAATCACCTTTCTGGGTCCATTCCTATATTTCGTCAACATGTTGATATTGCTACC AATGGAAATCCCGATCTTACAAATGGTACAAGAAATTATGACAACGCCCCTACAAGTGGT AAGAGAAGGACACACAATACAGTCATCATCGTCGTTGCCATTACTGGTGCTCTTGTTGGA TTGTGCTTGCTTGCTGCTATTGTTACAATTTCATATTCTAAGAGAATTTATCGTGTTGAA GATGAAGGACCATCAACTGAGGATGTTGCTCGAATCATCAATGGTCACCTCATAACTATG AATAGTATCCATACCTCTGCAATTGATTTCGTGAAAGCAATGGAAGCAGTCTCCAATCAC AGCAACATTTTTCTGAAAACAAGGTTCTGCACTTACTATAAGGCTGTGATGCCTAATGGC TCAACCTATTCTTTAAAACAGATTAATTGTAGTGACAAGATATTCCAAATTGGGAGCCAA GGGAAGGTTGCTCATGAACTTGAGGTACTTGGGAAGTTGAGCAATTCCAATGTAATGGTG CCATTGGCTTATGTGTTGACAGAAGACAATGCATACATCATCTATGAGCATGTGCACAAG GGCACGGTGTTCGATTTCCTTCATGCTGGAAGATCAGATGTTCTGGACTGGCCTTCACGG TATAGCATAGCTTTTGGGCTAGCCCAAGGGCTGACATTTCTTCATGGGTGCACTCAGCCA GTTCTGCTTCTTGATCTGTCAACAAGGACTGTCCACTTGAAGTCAATGAATGAGCCTCAG ATTGGAGATGTTGAACTTTACAAAATTGTTGATACTTTGAAGAGCAGTGGGAGCCTTTCG ACCATTGCTGGTACAGTTGGTTATATTCCACCAGAGTATGCATACACGATGAGGTTGACG ATGGCTGGCAACGTTTACAGCTTTGGAGTAATCTTACTGGAGCTTTTGACTGGGAAACCA TCGGTCAGTGATGGCATCGAGTTAGCCAAGTGGGCTCTGAGTCTTTCAGGCAGCCCTGAT CAGAGGGAGCAGATCCTTGACACCAGGGTCTCAAGAACTTCAGCTGCTGTTCACAGCCAG ATGTTGTCGGTCCTGAACATCGCCCTCGCTTGTGTTGCGCTCTCTCCAGATGCTCGACCA AAGATGCGCACCGTCTTGAGGATGCTATTCAACGCAAAGTGA

Peptide Sequence

PEP ID	Os12t0182300-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:4178415:4182634:-1 gene:Os12g0182300 transcript:Os12t0182300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os12t0182300-01)
Sequence	MGGQEQVAMAERRPCYCRNNGFLLLLVQVLLFLFLFLDSSMVATAASAPAPLNTTQVSIM KELSGLVTASAKWNTSDSNPCRWDGVSCSSSSNSISVVTNLTLSGYGLSNSTIFATICSL DTLQILDLSKNSFTNSIEQFFTSSCSMKAGLRSLNLSSSQLSMPLSNFSGFPLLEVLDLS FNSFSGDVRTQLSSLLKLRSLNLSSNNLAGDVPTSMTPSLEELVLSINNFSGSIPIALFN YQNLTMLDLSQNNLNGDVPDEFLKLPKLKTLLLSGNQLSGNIPVSVSNVASLARFAANQN NFTGFIPSGITKNVKMLDLSYNELSGVIPSDILSPVGLWTVDLTHNKLEGPIPSSLSPTL YRLRLGGGNSLNGTIPATIGDASTLAYLELDSNQLTGSIPLELGRCKSLSLLNLASNKFQ GPVPDAISSLDKLVVLKLQMNNLDGPIPSVFSNLTSLITLNLSGNSFTGGIPREIGKLPK LSILNLQCNKISGTIPDSLHLLTSLIELNLGNNILTGTIPTMPTKLSTVLNLSHNNLSGS IPSNIDLLSDLEILDLSYNNLYGEVPASLAKLESLTQLVLSYNHLSGSIPIFRQHVDIAT NGNPDLTNGTRNYDNAPTSGKRRTHNTVIIVVAITGALVGLCLLAAIVTISYSKRIYRVE DEGPSTEDVARIINGHLITMNSIHTSAIDFVKAMEAVSNHSNIFLKTRFCTYYKAVMPNG STYSLKQINCSDKIFQIGSQGKVAHELEVLGKLSNSNVMVPLAYVLTEDNAYIIYEHVHK GTVFDFLHAGRSDVLDWPSRYSIAFGLAQGLTFLHGCTQPVLLLDLSTRTVHLKSMNEPQ IGDVELYKIVDTLKSSGSLSTIAGTVGYIPPEYAYTMRLTMAGNVYSFGVILLELLTGKP SVSDGIELAKWALSLSGSPDQREQILDTRVSRTSAAVHSQMLSVLNIALACVALSPDARP KMRTVLRMLFNAK

Transcript Sequence

Transcript ID	Os12t0182300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:4178415:4182634:-1 gene:Os12g0182300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os12t0182300-01)
Sequence	ACTGGGAGTCTGGGAGGAGCAAGAAGAGGAGAGAAGAGAGCCATGGCCAAGAACACCGAG AGCCCCAAAACCTAGGGAAAGAGAGGAAAAAATCGATTTTCTTGGGTGGTGGTTGAGCCT GCAGTGAAGTTCATCAGGGAGGAAAGGGAGGGGATTAAGGGAAGGAGATACAGGAATCAA TGGGAGGCCAAGAACAGGTGGCCATGGCGGAGAGGAGGCCTTGTTACTGTCGCAACAATG GCTTCTTGCTGCTGCTGGTACAAGTTCTCCTCTTCTTGTTCTTGTTTCTTGATTCGTCCA TGGTCGCCACTGCCGCGTCGGCGCCGGCACCGCTAAATACGACTCAGGTATCGATCATGA AGGAGCTTTCTGGCTTGGTTACTGCCAGTGCCAAGTGGAACACGAGCGATTCGAATCCAT GCCGATGGGATGGAGTGAGTTGCTCTTCTAGCTCCAATTCCATATCAGTTGTGACCAACC TTACTTTGTCTGGGTATGGTTTGTCCAACTCCACCATATTTGCAACCATATGCTCTCTTG ACACCTTGCAAATCCTTGATCTCTCTAAGAATTCCTTCACCAATTCGATAGAGCAATTCT TCACCTCTTCTTGCTCCATGAAGGCTGGATTGCGGTCACTTAATCTCAGCAGCAGCCAGC TATCCATGCCTCTTAGTAATTTCTCTGGTTTTCCCCTTCTTGAGGTTCTTGACTTGTCCT TCAATTCTTTCAGTGGTGATGTCAGAACCCAGTTGAGTTCTTTGCTCAAGCTGAGAAGCT TGAATCTTAGTAGCAATAACTTGGCTGGTGATGTTCCTACAAGCATGACCCCGTCTTTGG AGGAATTGGTGTTGTCCATCAACAATTTCAGTGGTAGCATTCCAATAGCTTTGTTCAATT ACCAAAATCTTACTATGCTGGATCTTAGTCAGAACAATCTAAATGGTGATGTACCGGATG AGTTCTTAAAGTTACCCAAGCTCAAGACTTTGCTCTTATCAGGTAATCAACTGAGTGGCA ATATACCTGTGAGTGTGTCAAATGTTGCAAGCCTTGCTCGGTTTGCAGCTAATCAGAACA ATTTTACCGGTTTCATCCCTAGTGGTATCACCAAGAATGTGAAGATGCTGGATCTGAGTT ACAACGAACTTAGTGGAGTGATTCCCTCTGATATTCTTAGTCCTGTGGGACTGTGGACTG TTGATCTCACTCACAATAAGCTCGAAGGGCCCATCCCTAGCAGCTTGTCTCCGACCCTCT ATCGGTTGAGGCTTGGTGGAGGCAACTCTCTCAATGGAACCATCCCGGCCACCATTGGTG ATGCATCGACCTTGGCTTATCTTGAGCTGGATAGCAATCAGTTGACGGGAAGCATACCAT TGGAACTTGGCAGATGCAAGAGTTTGTCTTTGCTGAATCTGGCATCAAATAAGTTTCAGG GTCCAGTGCCTGATGCAATCAGCAGCCTTGACAAACTGGTAGTTCTTAAACTCCAAATGA ACAATCTGGATGGACCTATCCCAAGTGTATTTTCTAATTTGACAAGCCTGATCACATTGA ATCTTAGTGGTAATTCATTCACTGGAGGGATACCAAGAGAAATCGGCAAGCTGCCAAAGC TTTCCATTTTGAATTTGCAATGCAACAAGATCAGCGGCACCATTCCAGATTCACTCCATT TATTAACTTCTCTAATTGAGCTCAATCTGGGGAATAATATCTTGACTGGTACCATCCCAA CAATGCCGACCAAATTGAGTACTGTTCTTAATCTAAGCCACAACAATCTCAGCGGATCTA TTCCTTCAAATATTGACTTATTGAGTGATCTAGAGATTCTTGATCTTTCATACAACAACT TGTATGGTGAGGTGCCGGCCTCACTTGCAAAGCTAGAAAGCTTGACGCAACTAGTGCTTT CTTATAATCACCTTTCTGGGTCCATTCCTATATTTCGTCAACATGTTGATATTGCTACCA ATGGAAATCCCGATCTTACAAATGGTACAAGAAATTATGACAACGCCCCTACAAGTGGTA AGAGAAGGACACACAATACAGTCATCATCGTCGTTGCCATTACTGGTGCTCTTGTTGGAT TGTGCTTGCTTGCTGCTATTGTTACAATTTCATATTCTAAGAGAATTTATCGTGTTGAAG ATGAAGGACCATCAACTGAGGATGTTGCTCGAATCATCAATGGTCACCTCATAACTATGA ATAGTATCCATACCTCTGCAATTGATTTCGTGAAAGCAATGGAAGCAGTCTCCAATCACA GCAACATTTTTCTGAAAACAAGGTTCTGCACTTACTATAAGGCTGTGATGCCTAATGGCT CAACCTATTCTTTAAAACAGATTAATTGTAGTGACAAGATATTCCAAATTGGGAGCCAAG GGAAGGTTGCTCATGAACTTGAGGTACTTGGGAAGTTGAGCAATTCCAATGTAATGGTGC CATTGGCTTATGTGTTGACAGAAGACAATGCATACATCATCTATGAGCATGTGCACAAGG GCACGGTGTTCGATTTCCTTCATGCTGGAAGATCAGATGTTCTGGACTGGCCTTCACGGT ATAGCATAGCTTTTGGGCTAGCCCAAGGGCTGACATTTCTTCATGGGTGCACTCAGCCAG TTCTGCTTCTTGATCTGTCAACAAGGACTGTCCACTTGAAGTCAATGAATGAGCCTCAGA TTGGAGATGTTGAACTTTACAAAATTGTTGATACTTTGAAGAGCAGTGGGAGCCTTTCGA CCATTGCTGGTACAGTTGGTTATATTCCACCAGAGTATGCATACACGATGAGGTTGACGA TGGCTGGCAACGTTTACAGCTTTGGAGTAATCTTACTGGAGCTTTTGACTGGGAAACCAT CGGTCAGTGATGGCATCGAGTTAGCCAAGTGGGCTCTGAGTCTTTCAGGCAGCCCTGATC AGAGGGAGCAGATCCTTGACACCAGGGTCTCAAGAACTTCAGCTGCTGTTCACAGCCAGA TGTTGTCGGTCCTGAACATCGCCCTCGCTTGTGTTGCGCTCTCTCCAGATGCTCGACCAA AGATGCGCACCGTCTTGAGGATGCTATTCAACGCAAAGTGATCTGGCATGATATGTTTTG GTAGCTTAGGTAGGTTCTGAATGGAGTTTGATCATTTTGCTTAGTTTGTGGATGTCAGCA ATCAGTATACGGGGTCCTTGTATAGTACCAGCACCATAGTTCAAGGTAGAGTAGTAGATT ATGATATGGCTGATCAATTTAGTATTCAGATATCTATTTTGGAATGAATGACCAATGGGT TTATCTATGCTGTATCATCATATATTCACACATGGTTATTAGCATACCTTGTACACGGCA ATTCCATATAACAATAGTAGTGAAATAGAGCCATAGTTAAGGTAGAACAGTAGATAGACT ATGATATATATCCCTGAACAATTTAGAAGCCAGATATCTGTTTTGGAATGAATCAGGAAT TGTGTTCTTCTATGCTATATGATCATATTTGTAAATGGTTGGTTGTGTACATCCATGTGG GATGTCGAGGCCGGATTGGCATCCATTATCTAACAAACATATATATAAATTGTTATTACT TATTAGC