Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0182200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:4171993:4176907:-1 gene:Os12g0182200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrolipoamide S-acetyltransferase. (Os12t0182200-01);Similar to Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex. (Os12t0182200-02)
Sequence	ATGGCCGCCCTCCTCCACCTCCAGTCCTCCGCCACCGCCGCCGCGGCGCCCTCCTTCCTC CTCCTCCGCCGCCGCGGCGGCGGCGTCACGGCGCCGGCAGGGAGCAGCCGGCGGCGGCGG GCGTGCTTCCGCGTGGAGGCGAAGATCCGGGAGATCTTCATGCCGGCGCTGAGCTCGACC ATGACGGAGGGGAAGATCGTGTCGTGGACGGCCTCCGAGGGGGACCGCCTCGCCAAGGGC GACCCCGTCGTCGTCGTCGAGTCCGACAAGGCCGACATGGACGTCGAGACCTTCCACGAC GGCTTCCTCGCCGCCGTCCTCGTCCCCGCCGGCGAGTCCGCCCCCGTCGGCTCCGCCATC GCGCTCCTCGCCGAGTCCGAGGACGAGATCCCCGCCGCCCAGTCCAAGGCCGCCTCCCTC TCCTCCTCCTCCTCCTCCTCTCCACCACCTCCGCCTCCCCAAGAATCAACCCCTCCCCCT CCCCCGCCACCTCCTCCAGCGCCAGTAGCAGCAGCAGTCTCCGCTCCCGCGCCTCCATCC CCAGCCTCGCAAGGCGGCTTGCGCGTGGTCGCGTCGCCGTACGCCAGGAAGCTAGCCAAG GACCTCAACGTCGATCTCAACTCCATTACCGGCTCTGGCCCTGGCGGGCGGATAGTGGCC AAGGACGTCGAGGCGGCGGCGGCTGCGCCAAAGAAGGCGGCGCCCGTGGCGGCTGCTCGG CCCGATGTGCCGCTGGGTTCGACGGTGCCATTCACGACAATGCAGGGTGCCGTCAGCAAG AACATGGTGGAGAGCCTCGCCGTGCCGACGTTCAGAGTCGGTTACACCTTCACAACCGAT GCTCTGGATGCACTCTACAAGAAGATTAAGCCGAAGGGTGTGACAATGTCGGCCCTGTTG GCGAAGGCGACTGCAATGGCGCTCGTGCAACACCCGGTTATAAACTCCAGCTGCAGAGAT GGGAAGAGCTTCACTTACAACAGCAGCATAAACATCGCTGTGGCAGTGGCCATCGATGGT GGGTTGATTACGCCAGTGCTTCCTGATGCTGATAAGCTCGACATTTATTCTTTGTCGAGG AAATGGAAGGAGTTAGTCGATAAGGCTCGAGCGAAGCAGCTACAGCCCCATGAATACAAT TCTGGCACCTTTACTATTTCAAACCTTGGTATGTTTGGAGTTGACAGATTTGATGCAATC TTGCCACCTGGAACTGGTGCAATCATGGCCGTTGGATCATCACAACCAACACTTGTTGGT ACAAAAGATGGTAGTATTGGGATCAAGAACCAAATGCAGGTCAATGTTACTGCTGATCAT CGGGTTATTTACGGAGCTGATCTTGCCGCTTTTCTGCAAACTCTTTCCAAGATAATTGAG GATCCCAAGGACCTTACATTTTAG

Peptide Sequence

PEP ID	Os12t0182200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:4171993:4176907:-1 gene:Os12g0182200 transcript:Os12t0182200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrolipoamide S-acetyltransferase. (Os12t0182200-01);Similar to Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex. (Os12t0182200-02)
Sequence	MAALLHLQSSATAAAAPSFLLLRRRGGGVTAPAGSSRRRRACFRVEAKIREIFMPALSST MTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVPAGESAPVGSAI ALLAESEDEIPAAQSKAASLSSSSSSSPPPPPPQESTPPPPPPPPPAPVAAAVSAPAPPS PASQGGLRVVASPYARKLAKDLNVDLNSITGSGPGGRIVAKDVEAAAAAPKKAAPVAAAR PDVPLGSTVPFTTMQGAVSKNMVESLAVPTFRVGYTFTTDALDALYKKIKPKGVTMSALL AKATAMALVQHPVINSSCRDGKSFTYNSSINIAVAVAIDGGLITPVLPDADKLDIYSLSR KWKELVDKARAKQLQPHEYNSGTFTISNLGMFGVDRFDAILPPGTGAIMAVGSSQPTLVG TKDGSIGIKNQMQVNVTADHRVIYGADLAAFLQTLSKIIEDPKDLTF

Transcript Sequence

Transcript ID	Os12t0182200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:4171993:4176907:-1 gene:Os12g0182200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Dihydrolipoamide S-acetyltransferase. (Os12t0182200-01);Similar to Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex. (Os12t0182200-02)
Sequence	ACTCCCGAGGCACCCGCGACTCCTCAAAGCCTCGCCTCGCGTCGCGCCGCGGCGCACCAC CCCTCCCTCCCCCTCTCCGCCCCGCCCCACCCCACCCCCGCGCGACCTCGCAATGGCCGC CCTCCTCCACCTCCAGTCCTCCGCCACCGCCGCCGCGGCGCCCTCCTTCCTCCTCCTCCG CCGCCGCGGCGGCGGCGTCACGGCGCCGGCAGGGAGCAGCCGGCGGCGGCGGGCGTGCTT CCGCGTGGAGGCGAAGATCCGGGAGATCTTCATGCCGGCGCTGAGCTCGACCATGACGGA GGGGAAGATCGTGTCGTGGACGGCCTCCGAGGGGGACCGCCTCGCCAAGGGCGACCCCGT CGTCGTCGTCGAGTCCGACAAGGCCGACATGGACGTCGAGACCTTCCACGACGGCTTCCT CGCCGCCGTCCTCGTCCCCGCCGGCGAGTCCGCCCCCGTCGGCTCCGCCATCGCGCTCCT CGCCGAGTCCGAGGACGAGATCCCCGCCGCCCAGTCCAAGGCCGCCTCCCTCTCCTCCTC CTCCTCCTCCTCTCCACCACCTCCGCCTCCCCAAGAATCAACCCCTCCCCCTCCCCCGCC ACCTCCTCCAGCGCCAGTAGCAGCAGCAGTCTCCGCTCCCGCGCCTCCATCCCCAGCCTC GCAAGGCGGCTTGCGCGTGGTCGCGTCGCCGTACGCCAGGAAGCTAGCCAAGGACCTCAA CGTCGATCTCAACTCCATTACCGGCTCTGGCCCTGGCGGGCGGATAGTGGCCAAGGACGT CGAGGCGGCGGCGGCTGCGCCAAAGAAGGCGGCGCCCGTGGCGGCTGCTCGGCCCGATGT GCCGCTGGGTTCGACGGTGCCATTCACGACAATGCAGGGTGCCGTCAGCAAGAACATGGT GGAGAGCCTCGCCGTGCCGACGTTCAGAGTCGGTTACACCTTCACAACCGATGCTCTGGA TGCACTCTACAAGAAGATTAAGCCGAAGGGTGTGACAATGTCGGCCCTGTTGGCGAAGGC GACTGCAATGGCGCTCGTGCAACACCCGGTTATAAACTCCAGCTGCAGAGATGGGAAGAG CTTCACTTACAACAGCAGCATAAACATCGCTGTGGCAGTGGCCATCGATGGTGGGTTGAT TACGCCAGTGCTTCCTGATGCTGATAAGCTCGACATTTATTCTTTGTCGAGGAAATGGAA GGAGTTAGTCGATAAGGCTCGAGCGAAGCAGCTACAGCCCCATGAATACAATTCTGGCAC CTTTACTATTTCAAACCTTGGTATGTTTGGAGTTGACAGATTTGATGCAATCTTGCCACC TGGAACTGGTGCAATCATGGCCGTTGGATCATCACAACCAACACTTGTTGGTACAAAAGA TGGTAGTATTGGGATCAAGAACCAAATGCAGGTCAATGTTACTGCTGATCATCGGGTTAT TTACGGAGCTGATCTTGCCGCTTTTCTGCAAACTCTTTCCAAGATAATTGAGGATCCCAA GGACCTTACATTTTAGACACATCCAGCAATTGTTTTTCCCTGAGGCAATTGCGATAGGAT ATGCTTCCCCGTAGATGTGTAGCATGTGTTTCTGGTCATGTAAGTTAGTTGTTTAAGCTG TCACCTATGTTGGTATGGGGTAACTTCACTGGCTGGTTACCTTCTTATCATTGGTTTGTT CAATAAGCTTTTACAATTTTATTGGGATAGGGGCCGAGTATGATACATATTGCCTTTCAC CGGAAGACTGATTTTTTATTTTGTCGAGCTCGATGTACAATGGATCCATGCCCTGAATAC AACGAAATGAAACAGTGTTACAGCTTGTG