Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0181300-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:4103244:4104420:-1 gene:Os12g0181300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to TRAF-type zinc finger family protein. (Os12t0181300-00)
Sequence	ATGGAGCTCCCAGTTACTGAACCTGGGCCGGTGAGGTCTGAAGGATTGCTCCTGCAGTGT CCCTATTGTGATTCAGAGGCAATGCACAAGCTTGCGCAGCTGTTGCTCCCGGGCTTGGCC GCGGTATCCATCGACTGCACGACGGGCGATCTCTTCAGGAAGCCATCGGTGGTGGCCGTC GACATGAGGAAGGAGATGGTGGACTACGTGACGCAGAGGAGCGAGACGTTCATATCCGAT TCGCTCATCGAATCGGAGGCGAGCCAGGATGAGGAGAAGGAGATGCCGGAGGACCCGTTC GAGGTCGTGTCCATCTTCATGGACGATTTCAGCAGCACCAAGAGGAACATCATCGGCCAT GTCTCTGGGTGGCTGATGAGCGACAACCGCGAGGACAAGATCGATGACTTCGTCCAAGAA ATGGAGATGACCCGATTCTGGCCGCTGGAAAGGAGAGAGGCCATTGCTGAGGTCCTCCTC AAGAATGTAGACCTGAAAACCAAGTACCACTGCCCTGAGAAGTATGAGAATGAGCAGCGT CTCGCTGATCATAAGGCCCAATGTAGCTTCAGACCTGTTACTTGCCCCAATGACGGATGC CGAGCCAAAGTTTCAGTTCGCTGCATGACAGACCATGATTCTGCTTGCCTCTTCAAGATC CTTACATGTGAGCAGAGCTGCGAGAAGCGGCTCATGAGACGCGATATGGATAGGCACTGC GTGACCGTGTGCCCCATGAGGCCCATGAAGTGCCCCTTTGGCTGTGATTCCTCCTTCCCT GAGCGTAATCTTGAGCAGCACTGTTCTGAGTTTCTTCAGCCACACCTCCTTAAAGTCCTC AAGGCTATTCATAAGAAAGGTTTTACAGATGAGGGGTTCAAGGACCATGCTCTACTGCTG GAAAAGCAAGACATCGATGGTAAACTGGGTAAATCTCGAGAAGTAAGATCTCTTACTAAT GTTGTAAAGAACCTTGAAGCCAAAATGAAAAATGGTGGTTCGAGTTAG

Peptide Sequence

PEP ID	Os12t0181300-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:4103244:4104420:-1 gene:Os12g0181300 transcript:Os12t0181300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to TRAF-type zinc finger family protein. (Os12t0181300-00)
Sequence	MELPVTEPGPVRSEGLLLQCPYCDSEAMHKLAQLLLPGLAAVSIDCTTGDLFRKPSVVAV DMRKEMVDYVTQRSETFISDSLIESEASQDEEKEMPEDPFEVVSIFMDDFSSTKRNIIGH VSGWLMSDNREDKIDDFVQEMEMTRFWPLERREAIAEVLLKNVDLKTKYHCPEKYENEQR LADHKAQCSFRPVTCPNDGCRAKVSVRCMTDHDSACLFKILTCEQSCEKRLMRRDMDRHC VTVCPMRPMKCPFGCDSSFPERNLEQHCSEFLQPHLLKVLKAIHKKGFTDEGFKDHALLL EKQDIDGKLGKSREVRSLTNVVKNLEAKMKNGGSS

Transcript Sequence

Transcript ID	Os12t0181300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:4103244:4104420:-1 gene:Os12g0181300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to TRAF-type zinc finger family protein. (Os12t0181300-00)
Sequence	ATGGAGCTCCCAGTTACTGAACCTGGGCCGGTGAGGTCTGAAGGATTGCTCCTGCAGTGT CCCTATTGTGATTCAGAGGCAATGCACAAGCTTGCGCAGCTGTTGCTCCCGGGCTTGGCC GCGGTATCCATCGACTGCACGACGGGCGATCTCTTCAGGAAGCCATCGGTGGTGGCCGTC GACATGAGGAAGGAGATGGTGGACTACGTGACGCAGAGGAGCGAGACGTTCATATCCGAT TCGCTCATCGAATCGGAGGCGAGCCAGGATGAGGAGAAGGAGATGCCGGAGGACCCGTTC GAGGTCGTGTCCATCTTCATGGACGATTTCAGCAGCACCAAGAGGAACATCATCGGCCAT GTCTCTGGGTGGCTGATGAGCGACAACCGCGAGGACAAGATCGATGACTTCGTCCAAGAA ATGGAGATGACCCGATTCTGGCCGCTGGAAAGGAGAGAGGCCATTGCTGAGGTCCTCCTC AAGAATGTAGACCTGAAAACCAAGTACCACTGCCCTGAGAAGTATGAGAATGAGCAGCGT CTCGCTGATCATAAGGCCCAATGTAGCTTCAGACCTGTTACTTGCCCCAATGACGGATGC CGAGCCAAAGTTTCAGTTCGCTGCATGACAGACCATGATTCTGCTTGCCTCTTCAAGATC CTTACATGTGAGCAGAGCTGCGAGAAGCGGCTCATGAGACGCGATATGGATAGGCACTGC GTGACCGTGTGCCCCATGAGGCCCATGAAGTGCCCCTTTGGCTGTGATTCCTCCTTCCCT GAGCGTAATCTTGAGCAGCACTGTTCTGAGTTTCTTCAGCCACACCTCCTTAAAGTCCTC AAGGCTATTCATAAGAAAGGTTTTACAGATGAGGGGTTCAAGGACCATGCTCTACTGCTG GAAAAGCAAGACATCGATGGTAAACTGGGTAAATCTCGAGAAGTAAGATCTCTTACTAAT GTTGTAAAGAACCTTGAAGCCAAAATGAAAAATGGTGGTTCGAGTTAG