Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0180900-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:4082386:4085396:1 gene:Os12g0180900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0180900-01)
Sequence

TTCGCTCTCCTGGAGCACGGCTGGGACCTCTCCGGCGACATGGCCGTCGACAACATCCTC
GCGTCCCAGAACGTCGGAACCCAGCTACGCGCCTACCCTCCTCCCATCAAGTACTTCGAG
GCCTTGCTCCGCCAGGAGCACGCTGAGCTGCTGGAATATGTCGACGACGTAGATCGCGTC
GTCGCGCTGCTCAAGCCGCTGCCGCCACCAAAAACTGTCAGATACCCTGTTCTTTTTGAG
CGAGCGTGGGGATTCGGCAGACTATTTCCTTGCGATGTGACGGATGAGTCTCCTCAGTAT
CATGCCTACCTCCAGGAATTCTACAGACGCAATTGCAGTGCTCCTCCATCTGTTGCTGCC
GCCATCTCGCTGTGTCTGAAGAATGAGCGCATCTTGAGGTCTGAGTGGCAGAATCGAGGT
GTCCAAGTCCACCCTTACAACCTCAGCCTCAGTGACAACATTCTAGAATGCGCTTCAAAC
CTTGTGGACAAGATGAACGCCGAGTCTGCTACTGTCGCCTACGCTGCTTTAGTATGTGTC
CAAACTCTTCACTTCCATCTCCAGCACCTGCAATTTGTAGTTTTGAAGCTCCTAATTACT
AGTTTCGCTGTTGTATGTGCATCATTTGCAAAACGATGGTTAATTCCAAGTGTGTCGCCA
AGGAGGCTGAGCTAA

Peptide Sequence

PEP ID

Os12t0180900-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:4082386:4085396:1 gene:Os12g0180900 transcript:Os12t0180900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0180900-01)
Sequence

FALLEHGWDLSGDMAVDNILASQNVGTQLRAYPPPIKYFEALLRQEHAELLEYVDDVDRV
VALLKPLPPPKTVRYPVLFERAWGFGRLFPCDVTDESPQYHAYLQEFYRRNCSAPPSVAA
AISLCLKNERILRSEWQNRGVQVHPYNLSLSDNILECASNLVDKMNAESATVAYAALVCV
QTLHFHLQHLQFVVLKLLITSFAVVCASFAKRWLIPSVSPRRLS

Transcript Sequence

Transcript ID

Os12t0180900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:4082386:4085396:1 gene:Os12g0180900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0180900-01)
Sequence

ATTCGCTCTCCTGGAGCACGGCTGGGACCTCTCCGGCGACATGGCCGTCGACAACATCCT
CGCGTCCCAGAACGTCGGAACCCAGCTACGCGCCTACCCTCCTCCCATCAAGTACTTCGA
GGCCTTGCTCCGCCAGGAGCACGCTGAGCTGCTGGAATATGTCGACGACGTAGATCGCGT
CGTCGCGCTGCTCAAGCCGCTGCCGCCACCAAAAACTGTCAGATACCCTGTTCTTTTTGA
GCGAGCGTGGGGATTCGGCAGACTATTTCCTTGCGATGTGACGGATGAGTCTCCTCAGTA
TCATGCCTACCTCCAGGAATTCTACAGACGCAATTGCAGTGCTCCTCCATCTGTTGCTGC
CGCCATCTCGCTGTGTCTGAAGAATGAGCGCATCTTGAGGTCTGAGTGGCAGAATCGAGG
TGTCCAAGTCCACCCTTACAACCTCAGCCTCAGTGACAACATTCTAGAATGCGCTTCAAA
CCTTGTGGACAAGATGAACGCCGAGTCTGCTACTGTCGCCTACGCTGCTTTAGTATGTGT
CCAAACTCTTCACTTCCATCTCCAGCACCTGCAATTTGTAGTTTTGAAGCTCCTAATTAC
TAGTTTCGCTGTTGTATGTGCATCATTTGCAAAACGATGGTTAATTCCAAGTGTGTCGCC
AAGGAGGCTGAGCTAATGGTTCAGCGGCTGCGTCTAGGAGATCGCATCTACGTGCACTAC
AGTGATCGCAACCTGAGTACAAGGATTCGGCATGAGGCTTTGGGCCTTATGGCTGGCACG
GGACCTACTTCTTCATCGGTCACTGACCCTATGGTTCATTCTGCACTTTTGGGCATAGCG
AGAGAAGCTGAATGGTCGTGGAAGATCATAAGCCACAAGGATGTTGGCCCCTTAGGAGAC
AGAAGAAGCGAAGCAATCAGGGGCTCTGCCCTGTGTATCATAAAGGACGAATTGGATGAA
TATGCTGCCGCAGCTGCCACAGCTGCTGACTTGAGCAGTGAACCTTTTGTTGTTTGGCAA
CGGAATATGATTGCTGTCATCGAAGGTGGCTATCCTAACTGGTATGATATGTGAAAAGGG
GCACTACTGTTAAGAAATTGGATTCTGCAGTTTATGTCGCTGAAGACTATTCCAAAGACT
CATTAGATAATATATTTGACGAGGATATGATGAGCAAGTACATCAATGGCTCTCACAAGA
GGAAGATGAAAAAACCGAGGGGAAAGAATTCACTGAAGGAAGAACTGAAGTACTTCAAGA
AAGATATTCTTTAGTTCTTCTGAGCAGAGGAAAGGGATAGATGATGCATAGGACAAATGG
GAAGCAATGGTAATCGCGGTCGCAAGCACTAAAGCTGAGATGTTCACCTTGTGTGTTTCC
TGGTATAATGAAAGAATATGTATCAGGGGGACAATAGGGTTAGGTTTCAGTTATTATGGT
CTACATTCCTGAAAACCTTGATCTGTAATCCTTGATGCGCGGGTCAGGCTTACCAAGTAC
CAACGCTATTTATTAGGAGTCGTGGGATGGTTACCCTGTACCTGTGATTGCTATTTTGTT
GTCCGTCAATTTGTCAAGTAATGGAGTCCAAGGCAGCCCTTCGAAAATTAGGAGGGAAAC
GCTGCAGCAGGGGATTTATGTTTGCCTGACGTTCCATTGCAAGTCCAGGCCAGGAATCCT
ATTTCTATGGTCATGTGTCATACAGATGCTGTATGATCCAAGAGTCATATATATATAGCG
TATGCTGTAGGTATGTATTTGCTGCATACATTTGGATTTTCAACCTAAATTTAAAGCTGA
TTTTAGGGTTTTTTTT