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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0180400-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:4051769:4054373:1 gene:Os12g0180400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase II 8.2 kDa polypeptide. (Os12t0180400-01)
Sequence

TCCCTTTCGAAACGCGCAAAAACCCTCTCCGACTCTCCCCTTCTCCCACTCTTCTCCGGC
GGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCACC
TGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTAC
ACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCTC
ATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGAG
ACAGCAGGTTAA

Peptide Sequence

PEP ID

Os12t0180400-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:4051769:4054373:1 gene:Os12g0180400 transcript:Os12t0180400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase II 8.2 kDa polypeptide. (Os12t0180400-01)
Sequence

SLSKRAKTLSDSPLLPLFSGGGGGGGGSASEMIIPVRCFTCGKVIGNKWDLYLDLLQADY
TEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKTETAG

Transcript Sequence

Transcript ID

Os12t0180400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:4051769:4054373:1 gene:Os12g0180400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-directed RNA polymerase II 8.2 kDa polypeptide. (Os12t0180400-01)
Sequence

CTCCCTTTCGAAACGCGCAAAAACCCTCTCCGACTCTCCCCTTCTCCCACTCTTCTCCGG
CGGCGGCGGCGGCGGCGGCGGGAGCGCATCGGAGATGATCATCCCGGTGCGGTGCTTCAC
CTGCGGGAAGGTGATTGGGAACAAGTGGGATCTGTACCTGGATCTCCTCCAGGCTGACTA
CACAGAGGGGGATGCTCTGGATGCATTGGGTTTGGTCCGTTACTGCTGCCGGCGAATGCT
CATGACCCATGTTGACCTCATCGAGAAGTTACTCAACTACAACACGCTGGAGAAGACCGA
GACAGCAGGTTAAGTTGACCCAGCATGCTCCAGAACTCTTGTTCCTTATTGCCTTTGTTC
ACGAATGTTCCAAGGAATTTGTGTGATGATCCATGCTGCATTTCAACTATGTAACTGTTA
CCGTGATGTCAGATGATGGAAGTGATATAACTAGTGGGCAGAGTACCTCTGGTTGTGTGT
GAACTTGTTTTCAAGACTTTTATATCAAGGGGGGTATGTTCCTGCAGTAATTTTCTTATT
GTGATTTGCT