Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0179700-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:4028039:4031568:1 gene:Os12g0179700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os12t0179700-01);Domain of unknown function DUF1618 domain containing protein. (Os12t0179700-02)
Sequence	ATGGACTGCATCGACGAGATGCCAGACCTCCGATCTTGGAATCCTGACGATGAGGAGGAG GAGGAGGAGAAGGAGGAGATGCCCGCCGTCGTCGATTACTCCCCGCACCACCGCCGCCGG CCGTCCACCTTCACCCGCTGCGGCGTCATATTCGATACGGACCTCATCGTCCGCAAGCCC GTGGAAGGCGCCGCCACCGGTGGCCGGGCCAGCCACCGGACGAGCACGGGGTTCCCCTTC TCCGTGTCGCTGAACCTCGCCGTGCCGCCGGCGCTCTCCTCCATCTACCTGCACTGCGCG GAGGCCGTGATGCCCCCCACCCTCGAGCACGGGTATTTCGGCCGGTCCTCGCTCGTCGCC GCGGACGCCACCCACCTCCTCCTTCTTGTCGTCGTCCCCGTCAAGATTCAAGGCATGTAC GACCACGAGTACCCGGAGGAGTACTTCGTCTACACGGCCGACGCCCTCAGGCCTTCGCTG GCCGACGCCCTCTGTCCTACGCTGACGCGCCTCCCCAGATTCCCCGACAACCGCCAGCGC TTGGCCGGCGACATTGGCATCTTGAACCACGCCGCCGCCGCGGGTGATGGTTTCAGCTTC GCCGTTGCATCTTTGCAGACGTTCATGGAGTGGCAATCTGGTGAAGGATCCGCGGCCATC CTGCACCTCCAGGAGATGGCCAAGCTCTCCGTGCTCCAATGTTCAGTTGGCAGTGATCTA GATGAGGACAACACCAAGAACAACGACAGCAGATGGGTTGTCAAGAACCTGGCCATGCCT TTTGACTCGCAAGGGGATTTTGGGCCGCGCCAATGGAAGAGCAACATCGCCTTCGCCTAT GCCGGCAAATTATATTGGGCTGACTACGACGTTGGCCTTATCTACTGTGATGTCCTGGAA TCTTCACCCAAGCTCCAGTTGATCAAGTTCCCTGTTCCGGTGAGAAAATTTGAGCTTGGT GTCAGTGGTCCAGATGACAACTGCGGGAACTCTGAGTCCTTCAGGACAGCCGGTGTTTCT AATGGGAAGATCAAGTTCGTCGATGTTGACAATTGCCGCGCCCAATCCTTCGCCGTCATC ATCAGGACATGGACACTGCAAATGCCACAGATGGTATGGAAGTTGGATGATGTGCTCAAT GTCAAACAACTGTGGGGGTCAGCATCCTTCAAGAAATACGGTTTGCATCAGTGGGTGCCA GAGTATCCTGTGGTGAGCTTGCTAGACCCACACATTGTGCACTTTGTGCTGCACAAACAT ATGTACCATGATCAGGTCTGGATGATCGCAGTTGACATGAGGGCCAAGTCAGTTAAATCA TGCAAGAACTATCCAAAGGGTGAGAAGGAGGATGGATACAAGGGGCTGTCGTTCAACATT GATTTCATATGCAGCATGCTCTCGAAGTAA

Peptide Sequence

PEP ID	Os12t0179700-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:4028039:4031568:1 gene:Os12g0179700 transcript:Os12t0179700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os12t0179700-01);Domain of unknown function DUF1618 domain containing protein. (Os12t0179700-02)
Sequence	MDCIDEMPDLRSWNPDDEEEEEEKEEMPAVVDYSPHHRRRPSTFTRCGVIFDTDLIVRKP VEGAATGGRASHRTSTGFPFSVSLNLAVPPALSSIYLHCAEAVMPPTLEHGYFGRSSLVA ADATHLLLLVVVPVKIQGMYDHEYPEEYFVYTADALRPSLADALCPTLTRLPRFPDNRQR LAGDIGILNHAAAAGDGFSFAVASLQTFMEWQSGEGSAAILHLQEMAKLSVLQCSVGSDL DEDNTKNNDSRWVVKNLAMPFDSQGDFGPRQWKSNIAFAYAGKLYWADYDVGLIYCDVLE SSPKLQLIKFPVPVRKFELGVSGPDDNCGNSESFRTAGVSNGKIKFVDVDNCRAQSFAVI IRTWTLQMPQMVWKLDDVLNVKQLWGSASFKKYGLHQWVPEYPVVSLLDPHIVHFVLHKH MYHDQVWMIAVDMRAKSVKSCKNYPKGEKEDGYKGLSFNIDFICSMLSK

Transcript Sequence

Transcript ID	Os12t0179700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:4028039:4031568:1 gene:Os12g0179700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os12t0179700-01);Domain of unknown function DUF1618 domain containing protein. (Os12t0179700-02)
Sequence	GCCTTTCCCCATCCCCAAATCAAATCCCTAGCAATCGTCCTGGGGTTCCTCTCTCACAAG AGCGAGGATGGACTGCATCGACGAGATGCCAGACCTCCGATCTTGGAATCCTGACGATGA GGAGGAGGAGGAGGAGAAGGAGGAGATGCCCGCCGTCGTCGATTACTCCCCGCACCACCG CCGCCGGCCGTCCACCTTCACCCGCTGCGGCGTCATATTCGATACGGACCTCATCGTCCG CAAGCCCGTGGAAGGCGCCGCCACCGGTGGCCGGGCCAGCCACCGGACGAGCACGGGGTT CCCCTTCTCCGTGTCGCTGAACCTCGCCGTGCCGCCGGCGCTCTCCTCCATCTACCTGCA CTGCGCGGAGGCCGTGATGCCCCCCACCCTCGAGCACGGGTATTTCGGCCGGTCCTCGCT CGTCGCCGCGGACGCCACCCACCTCCTCCTTCTTGTCGTCGTCCCCGTCAAGATTCAAGG CATGTACGACCACGAGTACCCGGAGGAGTACTTCGTCTACACGGCCGACGCCCTCAGGCC TTCGCTGGCCGACGCCCTCTGTCCTACGCTGACGCGCCTCCCCAGATTCCCCGACAACCG CCAGCGCTTGGCCGGCGACATTGGCATCTTGAACCACGCCGCCGCCGCGGGTGATGGTTT CAGCTTCGCCGTTGCATCTTTGCAGACGTTCATGGAGTGGCAATCTGGTGAAGGATCCGC GGCCATCCTGCACCTCCAGGAGATGGCCAAGCTCTCCGTGCTCCAATGTTCAGTTGGCAG TGATCTAGATGAGGACAACACCAAGAACAACGACAGCAGATGGGTTGTCAAGAACCTGGC CATGCCTTTTGACTCGCAAGGGGATTTTGGGCCGCGCCAATGGAAGAGCAACATCGCCTT CGCCTATGCCGGCAAATTATATTGGGCTGACTACGACGTTGGCCTTATCTACTGTGATGT CCTGGAATCTTCACCCAAGCTCCAGTTGATCAAGTTCCCTGTTCCGGTGAGAAAATTTGA GCTTGGTGTCAGTGGTCCAGATGACAACTGCGGGAACTCTGAGTCCTTCAGGACAGCCGG TGTTTCTAATGGGAAGATCAAGTTCGTCGATGTTGACAATTGCCGCGCCCAATCCTTCGC CGTCATCATCAGGACATGGACACTGCAAATGCCACAGATGGTATGGAAGTTGGATGATGT GCTCAATGTCAAACAACTGTGGGGGTCAGCATCCTTCAAGAAATACGGTTTGCATCAGTG GGTGCCAGAGTATCCTGTGGTGAGCTTGCTAGACCCACACATTGTGCACTTTGTGCTGCA CAAACATATGTACCATGATCAGGTCTGGATGATCGCAGTTGACATGAGGGCCAAGTCAGT TAAATCATGCAAGAACTATCCAAAGGGTGAGAAGGAGGATGGATACAAGGGGCTGTCGTT CAACATTGATTTCATATGCAGCATGCTCTCGAAGTAATTACAATCAGGTCGTGATGGTAG GAAATATGTTGAATGAAGCAGGAGCATCCACCGATGTTACGCCTGACCGATCGTCCGTCC ATTATCAACACAAGATTGGCCTCGGTTTATGATGTTGTGGACTTTGGCGGGGTGTTTTTG GTATAGACATAAGGTTTTGCATATCTTTGTGTTAAAATGGAGGGTCGTTAGTTTCTTGTT TGTTTGGAGATGTCTTAGGTTTACTGCTGATTGTGCCTTCTGCTTCGATAATCATCACAA AGCTAAACATGTTCCTAGTTGCTTCGTTCTCCAGACAACGTTTTAGAAGAAAAATTGGGA TGTTGTGGCCGCCGATATTGGAACTAGCATTGCCTGTGTTTTGAGCCCTGTTTGTTTCTT TTTCTCTTCTGAACATCTGACATTGCTTTGACAAGATTCAATAGCTAAAGAAGGGCGAGT GGGCGACCATCAACATTCAGAACGATTTATTGAACAAATTCAGATACTTTGTCTTCTGGC CTTGTAATACTTGCATTGGTTATCTTCCCTGTTGTCCTGATACTTCATTTATCATAGCTG CACATCGAGATTGACTGGTCCGAATTCTCTGATCTAGGAACTCTGGATGATACTGGCAGG ATATCTCCCGGTGACTTGGATGAGGTGCAAGTACCATCTACATCATCAGTTAAGTTGTCA AGAGTCTTCTTTCTGACTGAAACCACACAGATCTGAGCAGCTTAATGGCACAAATTAATG GCCAGTTTCTAAGTATTTCGAGTGCTTACTTCGAGTGCTACAGGATCAGTGCTTATTTCG AGTGTGTGGAGACTGATGCGGCAATGGATCAGTGCTTACTTCCCCATCCCTGGGAGCGAA AACACATGCCTGACAGAGTGGTGGTTGCAGGCCAGAACATGTTTTCGGAAGTGCTACAGG ACAAACTTCGACAGCGCTTGTATGCTGATTTGCTGGCAGATTTGGAAGGAAAGAAATGCG CGTGTTTTCGACCAAAGATCGAGAAGCCCTAACCAGTTAGCAGAGGCTATCAAAGAAGAG ATCTTAGTGTGGAAAGAAGCAGGCTATTTCGAGAATTGCAGTTCTTAGTTTTCTTTCTGT TGTGTTGACGTTTCCAGTTCTTTAGTTTGCCGGGCTGTGGTTCCTGCCACAGTCTAATTC GACAGCCTCCTGTCGTTGCAAGCGAGAACTACTTGTACTTTGATTTTTTTTCCTCCCAAT CTTAATGAAATTTGGTCGCCGGTTCCTTCGGCCGACCCGGCAAAAAAAAAAAAAAAGTAT TTCGAGTGGATCTTCATTGTAAATTCTTTGGGGGTAATAAGTGGTGGATTCGTATATGTT TTCCAAATATTCTTACACCGTTATATTGGTTTTATATTTCC