Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0177800-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3938882:3943933:1 gene:Os12g0177800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-mannose binding lectin family protein, expressed. (Os12t0177800-01)
Sequence	ATGCCGAAATCTAAATCATTCGTCCCAGTGGCTGGTCATGCTAATTACCTGCATAAAGGG TCTTCCCTCTCCGCGAAGCATGCCTCTAATGTACTGCGGTCAACGGATGGCACCTTCTCG TTCGGCTTCTACAACCTTTCATCCACTGTGTTCACCTTGTCAATCTGGTTCACCAATTCA GCTGACAAGACCATCGCCTGGAGCGCAAATCAAGACCGCCCTGTGCATGAGAGCGGGTCG AAAGTCATGCTGAACAAGGATGGAAGCATGGTTCTCACAGACTATGATGGCACGGTTGTC TGGCAAATCAGTAGCTCTGCAGAAGCTGTCCGTGCCGAGCTCATGGACTCTGGGAACCTT GTGGTGAAGGATCAAGGTGGAAGCATCCTATGGCAAAGCTTTGATCATCCAACCAACACT CTGCTCCCGATGCAGCCTGTTACAGCCACCGCAAAGCTGGTATCAACTGATCCCTCACAC CCAACAAGTTACTACACTTTACGGTTTGATGATCGGTACGTTTTATCACTTGCTTATGAT GGACCAGACATCTTTAACCTCTACTGGCCTAACCCTGACCAGAGTAGCTGGACAAACTAT AGGATCTCTTACAACCGTAGCAGGAGTGGTGTTCTTGATAAGCTGGGGAAATTTATGGCG AGCGATAACACAACTTTCTATGCCTCAGATTGGGGTTTGGAGATTAAGAGGAGACTCACG TTGGACTATGATGGAAATCTTCGGCTTTACAGCCTGAATGAGTCAGATGGGAGCTGGTAC AATTCTTGGATGGCTTTCTCCCAACCCTGTGAAATACACGGCCTTTGTGGTTGGAACGGG ATATGTGCATACACACCAAAGATTGGCTGCTCTTGCCCTCCTGGTTATGTGGTCAGTGAT CCTGGTGATTGGAGCAGAGGATGCAAGCCAGCATTCAACCTCACTTGCAGCAATGATGGC CAGAAAATGAGCTTTGTGCGCATTCCTCAGACTGACTTCTGGGGCTTTGATATGAACTAT GTCATGTCAACATCCCTGCACGCTTGTAGAGCAATGTGTTTGGCGAGTTGCTCCTGTGTA GCATTCGTGTACAAAGTGTACCCTAATGGCTGCTTCTTGAAGTCTGATCTCTTCAATGGC AAGACAGTTTCAGGATACCCTGGTGCAGCATATATCAAGGTTCCTCAGAGCTTTCTGTCC CGGTCACAAGCACATGTTTCTGAACTTGCCAATCGCCATGTTTGCAATGCATCAAAAACA CAAACGTTCAATTACGCTACACAGAGCAACAAAGGAACGGGCATGATGTGGTACTACTAC TACTGTTTCCTGGCTGCATTCTTTCTTGTGGAGCTCTGCTTCATTGCTTTTGGCTGGTGG TTCATGGCAAAAACACACTCAGCACGATCAGCGATATGGGCTGCGGAGGAAGGCTACAGG GTTGTAACAGATCATTTCCGTAGGTTTACCTACAAAGAATTGCGGAGGGACTGTTACAGT GGCAGCATAGGTACAAGATTGCAGTTGGTGTGGCCAAAGGGCTAG

Peptide Sequence

PEP ID	Os12t0177800-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3938882:3943933:1 gene:Os12g0177800 transcript:Os12t0177800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-mannose binding lectin family protein, expressed. (Os12t0177800-01)
Sequence	MPKSKSFVPVAGHANYLHKGSSLSAKHASNVLRSTDGTFSFGFYNLSSTVFTLSIWFTNS ADKTIAWSANQDRPVHESGSKVMLNKDGSMVLTDYDGTVVWQISSSAEAVRAELMDSGNL VVKDQGGSILWQSFDHPTNTLLPMQPVTATAKLVSTDPSHPTSYYTLRFDDRYVLSLAYD GPDIFNLYWPNPDQSSWTNYRISYNRSRSGVLDKLGKFMASDNTTFYASDWGLEIKRRLT LDYDGNLRLYSLNESDGSWYNSWMAFSQPCEIHGLCGWNGICAYTPKIGCSCPPGYVVSD PGDWSRGCKPAFNLTCSNDGQKMSFVRIPQTDFWGFDMNYVMSTSLHACRAMCLASCSCV AFVYKVYPNGCFLKSDLFNGKTVSGYPGAAYIKVPQSFLSRSQAHVSELANRHVCNASKT QTFNYATQSNKGTGMMWYYYYCFLAAFFLVELCFIAFGWWFMAKTHSARSAIWAAEEGYR VVTDHFRRFTYKELRRDCYSGSIGTRLQLVWPKG

Transcript Sequence

Transcript ID	Os12t0177800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3938882:3943933:1 gene:Os12g0177800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-mannose binding lectin family protein, expressed. (Os12t0177800-01)
Sequence	TTCAGTTCGAAGGAAATAAATACTCATTTTCCTGGACTTGTTGCACTATCAATTGAAGAA ACTAGTGGAGACTGCAAAATTATGTTGTATTAAATTCAAGTTGGATTGGCCATCTGATTT TTCATTCTACTGTTCAAAAAACTTGGTTATTCTTCAAATGATCTCCTTGGACCTTGGGGT GACTTGATGACTTCCCAGTGAGATTGTAGTATTGCACTACATGTAATCATAAAAAATGGT ATGCCGAAATCTAAATCATTCGTCCCAGTGGCTGGTCATGCTAATTACCTGCATAAAGGG TCTTCCCTCTCCGCGAAGCATGCCTCTAATGTACTGCGGTCAACGGATGGCACCTTCTCG TTCGGCTTCTACAACCTTTCATCCACTGTGTTCACCTTGTCAATCTGGTTCACCAATTCA GCTGACAAGACCATCGCCTGGAGCGCAAATCAAGACCGCCCTGTGCATGAGAGCGGGTCG AAAGTCATGCTGAACAAGGATGGAAGCATGGTTCTCACAGACTATGATGGCACGGTTGTC TGGCAAATCAGTAGCTCTGCAGAAGCTGTCCGTGCCGAGCTCATGGACTCTGGGAACCTT GTGGTGAAGGATCAAGGTGGAAGCATCCTATGGCAAAGCTTTGATCATCCAACCAACACT CTGCTCCCGATGCAGCCTGTTACAGCCACCGCAAAGCTGGTATCAACTGATCCCTCACAC CCAACAAGTTACTACACTTTACGGTTTGATGATCGGTACGTTTTATCACTTGCTTATGAT GGACCAGACATCTTTAACCTCTACTGGCCTAACCCTGACCAGAGTAGCTGGACAAACTAT AGGATCTCTTACAACCGTAGCAGGAGTGGTGTTCTTGATAAGCTGGGGAAATTTATGGCG AGCGATAACACAACTTTCTATGCCTCAGATTGGGGTTTGGAGATTAAGAGGAGACTCACG TTGGACTATGATGGAAATCTTCGGCTTTACAGCCTGAATGAGTCAGATGGGAGCTGGTAC AATTCTTGGATGGCTTTCTCCCAACCCTGTGAAATACACGGCCTTTGTGGTTGGAACGGG ATATGTGCATACACACCAAAGATTGGCTGCTCTTGCCCTCCTGGTTATGTGGTCAGTGAT CCTGGTGATTGGAGCAGAGGATGCAAGCCAGCATTCAACCTCACTTGCAGCAATGATGGC CAGAAAATGAGCTTTGTGCGCATTCCTCAGACTGACTTCTGGGGCTTTGATATGAACTAT GTCATGTCAACATCCCTGCACGCTTGTAGAGCAATGTGTTTGGCGAGTTGCTCCTGTGTA GCATTCGTGTACAAAGTGTACCCTAATGGCTGCTTCTTGAAGTCTGATCTCTTCAATGGC AAGACAGTTTCAGGATACCCTGGTGCAGCATATATCAAGGTTCCTCAGAGCTTTCTGTCC CGGTCACAAGCACATGTTTCTGAACTTGCCAATCGCCATGTTTGCAATGCATCAAAAACA CAAACGTTCAATTACGCTACACAGAGCAACAAAGGAACGGGCATGATGTGGTACTACTAC TACTGTTTCCTGGCTGCATTCTTTCTTGTGGAGCTCTGCTTCATTGCTTTTGGCTGGTGG TTCATGGCAAAAACACACTCAGCACGATCAGCGATATGGGCTGCGGAGGAAGGCTACAGG GTTGTAACAGATCATTTCCGTAGGTTTACCTACAAAGAATTGCGGAGGGACTGTTACAGT GGCAGCATAGGTACAAGATTGCAGTTGGTGTGGCCAAAGGGCTAGCTTACCTTCACCATG AGTGTATGGATTGGATCATCCATTGTGACGTAAAGCCTGAGAACATACTTCTCGACCAGG ATTTCGAGCCCAAAATCAGCGATTTCGGGTTCGCGAAGCTGCTACAGAGAAACCAGACTG ATCCCAACATGTCAAAGATCCGAGGAACTAGGGGTTACATCGCTCCGGAATGGGTTTCTG GTGTTCCCATAACTGAAAAGGTTGATGTGTACAGTTACGGAGTGGTGCTTCTGGAGTTAG TCATGGGGCTTCGAATGTCTGAGCTACCAGCAAATGGCAGTGCAGATGAAGGTGCTGCAT TGAGGCAGTTAGTGTGGACAGTAACAGAGAAGATTAAAACCGGTGACCAAACATTGATCG ATGGTGTTGTTGATCCTAGATTGAATGGCAACTTTGTGCGCTCCGAGGTGCTACTGGTGC TGGAGTTTGCTGTTCTGTGCCTGGAGAAAGAAAGGAACCAAAGACCAAACATGAATCATG TGGTGCAGAAGTTCCTTTCGTATGAATGAATTCGACAATTTTCCATGTCCCTGTCGCCTG TTTACCTTAAATGAAAGCCATAATGCAGTTTTATAATTTTCGTACTACTTGGATGCAATG GAAACAAATGTTTGATGTATCACTCTTGTTCTTGTATTACACATTAATTCAAGATGATCC TGTGGTTAGTTGTTTTGATGAGATCCT