Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0177500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3932583:3935899:1 gene:Os12g0177500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aspartic protease 3 description:Peptidase A1 domain containing protein. (Os12t0177500-01)
Sequence	ATGGCGGCCGGGTGGGCCCGCCCTGCCGGCTTTGCCCTGCTGGTGGTGGTGGTGCTGGCG GCGGCGGCGAGCGCGGACAGGCCGGCGAGGGGCGGGCTGTCGGTGACGGCCGGGGCGGAG GAGTCCTCCGCCGTGTTCCCGCTCTACGGCGACGTGTACCCCCACGGATTGTACTATGTG GCGATGAGCATCGGCAACCCGCCGAGGCCCTACTTCCTGGACGTCGACACCGGCAGCGAC CTCACCTGGCTGCAGTGCGACGCCCCCTGCGTCAGCTGCTCCAAGGTTCCGCACCCGCTG TACCGACCAACAAAGAACAAGCTGGTTCCATGTGTGGATCAGATGTGCGCCGCTCTGCAC GGTGGTCTGACCGGGAGGCACAAATGTGATTCACCAAAGCAGCAGTGTGACTATGAGATT AAGTATGCTGACCAGGGATCATCACTTGGTGTGCTTGTCACTGACAGCTTCGCACTCCGA CTTGCAAACTCCTCAATCGTCCGTCCCGGTCTTGCATTTGGGTGTGGGTATGATCAGCAG GTTGGGAGCAGCACTGAGGTGTCAGCTACTGATGGTGTCCTTGGGCTTGGGAGTGGCTCT GTCAGCCTGCTTTCACAGCTCAAGCAGCATGGGATCACTAAGAACGTGGTTGGCCACTGC CTCAGTACAAGAGGTGGAGGGTTCCTCTTCTTTGGTGATGACATTGTGCCTTACTCGCGT GCAACGTGGGCTCCTATGGCTCGTAGCACATCCCGGAATTACTATTCACCTGGCTCGGCA AACCTTTACTTTGGTGGCCGGCCACTAGGTGTGAGGCCAATGGAAGTAGTCTTTGACAGC GGCAGTTCATTCACTTACTTTTCTGCACAGCCATATCAAGCACTTGTTGATGCAATTAAG GGTGATTTAAGCAAGAACCTGAAAGAGGTACCTGACCACTCTTTGCCTCTATGCTGGAAG GGGAAGAAACCATTCAAATCTGTTCTTGATGTAAAAAAGGAGTTCAGAACAGTGGTATTG AGCTTTTCTAATGGCAAGAAAGCTCTCATGGAGATCCCTCCTGAAAACTACCTTATTGTC ACTAAATATGGGAATGCATGCCTTGGCATCCTCAATGGATCAGAGGTTGGCCTCAAGGAT CTGAACATTGTCGGAGACATCACAATGCAAGATCAGATGGTGATATATGACAATGAGAGA GGGCAGATTGGATGGATCCGTGCACCCTGTGATAGAATCCCCAAGTTTGGATCTTCCCTT CTGTGA

Peptide Sequence

PEP ID	Os12t0177500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3932583:3935899:1 gene:Os12g0177500 transcript:Os12t0177500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aspartic protease 3 description:Peptidase A1 domain containing protein. (Os12t0177500-01)
Sequence	MAAGWARPAGFALLVVVVLAAAASADRPARGGLSVTAGAEESSAVFPLYGDVYPHGLYYV AMSIGNPPRPYFLDVDTGSDLTWLQCDAPCVSCSKVPHPLYRPTKNKLVPCVDQMCAALH GGLTGRHKCDSPKQQCDYEIKYADQGSSLGVLVTDSFALRLANSSIVRPGLAFGCGYDQQ VGSSTEVSATDGVLGLGSGSVSLLSQLKQHGITKNVVGHCLSTRGGGFLFFGDDIVPYSR ATWAPMARSTSRNYYSPGSANLYFGGRPLGVRPMEVVFDSGSSFTYFSAQPYQALVDAIK GDLSKNLKEVPDHSLPLCWKGKKPFKSVLDVKKEFRTVVLSFSNGKKALMEIPPENYLIV TKYGNACLGILNGSEVGLKDLNIVGDITMQDQMVIYDNERGQIGWIRAPCDRIPKFGSSL L

Transcript Sequence

Transcript ID	Os12t0177500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3932583:3935899:1 gene:Os12g0177500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aspartic protease 3 description:Peptidase A1 domain containing protein. (Os12t0177500-01)
Sequence	AGACAAGGAGAAGGGGGCAGAAGCAGAGCTTAGCTCTCCCCTCCTCCTCCTCCTCCTCCT CCCATGGCGGCCGGGTGGGCCCGCCCTGCCGGCTTTGCCCTGCTGGTGGTGGTGGTGCTG GCGGCGGCGGCGAGCGCGGACAGGCCGGCGAGGGGCGGGCTGTCGGTGACGGCCGGGGCG GAGGAGTCCTCCGCCGTGTTCCCGCTCTACGGCGACGTGTACCCCCACGGATTGTACTAT GTGGCGATGAGCATCGGCAACCCGCCGAGGCCCTACTTCCTGGACGTCGACACCGGCAGC GACCTCACCTGGCTGCAGTGCGACGCCCCCTGCGTCAGCTGCTCCAAGGTTCCGCACCCG CTGTACCGACCAACAAAGAACAAGCTGGTTCCATGTGTGGATCAGATGTGCGCCGCTCTG CACGGTGGTCTGACCGGGAGGCACAAATGTGATTCACCAAAGCAGCAGTGTGACTATGAG ATTAAGTATGCTGACCAGGGATCATCACTTGGTGTGCTTGTCACTGACAGCTTCGCACTC CGACTTGCAAACTCCTCAATCGTCCGTCCCGGTCTTGCATTTGGGTGTGGGTATGATCAG CAGGTTGGGAGCAGCACTGAGGTGTCAGCTACTGATGGTGTCCTTGGGCTTGGGAGTGGC TCTGTCAGCCTGCTTTCACAGCTCAAGCAGCATGGGATCACTAAGAACGTGGTTGGCCAC TGCCTCAGTACAAGAGGTGGAGGGTTCCTCTTCTTTGGTGATGACATTGTGCCTTACTCG CGTGCAACGTGGGCTCCTATGGCTCGTAGCACATCCCGGAATTACTATTCACCTGGCTCG GCAAACCTTTACTTTGGTGGCCGGCCACTAGGTGTGAGGCCAATGGAAGTAGTCTTTGAC AGCGGCAGTTCATTCACTTACTTTTCTGCACAGCCATATCAAGCACTTGTTGATGCAATT AAGGGTGATTTAAGCAAGAACCTGAAAGAGGTACCTGACCACTCTTTGCCTCTATGCTGG AAGGGGAAGAAACCATTCAAATCTGTTCTTGATGTAAAAAAGGAGTTCAGAACAGTGGTA TTGAGCTTTTCTAATGGCAAGAAAGCTCTCATGGAGATCCCTCCTGAAAACTACCTTATT GTCACTAAATATGGGAATGCATGCCTTGGCATCCTCAATGGATCAGAGGTTGGCCTCAAG GATCTGAACATTGTCGGAGACATCACAATGCAAGATCAGATGGTGATATATGACAATGAG AGAGGGCAGATTGGATGGATCCGTGCACCCTGTGATAGAATCCCCAAGTTTGGATCTTCC CTTCTGTGATCATTTCACACACCTGAACATATATACCCATAATTACTCTCTGTTTATTCA AACAGTGACAATACCATTCATGGATTTGAGGACGGTTATTGTTGGCCTCAGTTCCCCAAC ATCATTGGTTATCAGAATGAGCAGTCCGCAGTCTGTTACAGTTCAATTACAAAATGAGCG ACAAGGGAAAAGGCCATTAGGATGATAGAAGGACCAACCGTCAGAAGGATGAACATCAAA GGGAGGCTCTACACGGTATTATTAGGTGAATGTATTCTTTAGAAAAGAGAAAATCTAGTT ACCTGTAAACATCATCATGTTCATATGAAATAAAATTATGATGTTCCTATGAAACAGTCC CAGTCCCAGTCCCACTCTTGGTTGGCACAAAGTTCTTCCTGTATACTTGTAAGACTGAAT ATAATTAGTTCCACAATCTGTTATTGGCTGGGACTATACATTATGTAGTCTAATATGCTA TGTATATGATTTGTTAGC