Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0175700-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3855819:3860795:1 gene:Os12g0175700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os12t0175700-01)
Sequence	ATGCTGCTCCCCACCTCCGCCTCCGCCTGCCGCGGCAGCGGCCGCGCGCTCCTCCTCGCC CTCGCCGCCGCCCTCCTCGCCCTCGCCACGCCGCGCCCCGCCTCCGCCTCCGAGTCAGAC CACAAGTACAAAGTTGAAGAACCAGTTAAGCTCTGGGTGAACAAAGTCGGCCCTTACAAT AATCCACAAGAAACTTACAACTATCACAGCCTTCCATTTTGTCAACCATCTGAGAACCCT GCGCATAAATGGGGTGGTCTTGGAGAGGTCCTGGGTGGAAATGAGCTGATTGATAGTCAG ATTGACATAAAGTTCTTAAGAAATGAGGAGAGGGGCTCCATTTGTACACTTGAGCTTGAT TCTAAAAAGGTTCAGCAGTTCTCCGATGCCATTGATAACTCATACTGGTTCGAGTTTTTC ATGGATGATCTGCCTCTTTGGGGTTTTGTTGGGGAGACGGACAAAAACAATGAAAACAAG CGTTATCTCTACACACACAAGAGCATTCTTGTCAAATACAATGATAACAGGATCATTCAT GTTAATCTCACCCAAGAGTCTCCTAAGCTTCTTGAAGCTGGTAAGAAATTGGACATGACA TATTCAGTGAAGTGGTTACAAACAGATGTGACCTTTGCACGCCGCTTTGAAGTATACCTG GATTATCCTTTCTTTGAGCACCAGATTCATTGGTTCTCCATTTTCAATTCTTTCATGATG GTTATTTTCCTCACTGGTTTGGTTTCAATGATATTGATGCGGACATTGAGAAATGACTAT GCAAAGTATGCTCGTGAAGATGATGATCTGGAGTCACTGGAGAGAGATGTTAATGAGGAA TCTGGATGGAAGCTTGTTCATGGTGATGTATTTCGCCCTCCTCGAAGTTTGGCCTTTCTT TCTGCAGTTGTTGGCATCGGCACTCAGCTGGCAGCTCTTATCCTTCTTGTTATTGTATTG GCCATTGTTGGCATGCTATATGTTGGGCGAGGGTCTATCATCACAACCTTCATTGTGTGC TATGCTCTTACATCTTTTATTTCTGGCTATGTCAGTGGTGGCCTCTACTCAAGGAATGGT GGTAAAAACTGGATAAAGGCTATGATCCTTACAGCATCCCTATTTCCATTCTTGTGCTTT GCAATTGGCTTTGTTCTGAATACAATTGCTATCTTCTACCGATCATTAGCGGCAATACCA TTCGGCACAATGGTTGTCATGTTCGTTCTTTGGGCCTTCATTTCTTTTCCGCTGGTGCTT CTGGGAACTGTTGTTGGTAGGAACTGGAGTGGTGCTCCTAACAATCCCTGCCGAGTAAAG ACTATTCCACGGCCTATTCCAGAGAAGAAGTGGTACCTTACACCTTCTGTTATCTCATTG ATGGGTGGGCTGCTTCCCTTTGGCAGTATCTTCATTGAGATGTACTTTGTGTTCACGTCA TTCTGGAACTACAAGGTTTATTATGTCTACGGCTTCATGCTGCTGGTCTTTGTCATCCTT CTAATAGTTACAATCTGTGTCACTATTGTGGGTACTTATTTCTTGCTGAATGCTGAGAAC TATCACTGGCAATGGACTTCATTTCTCTCTGCTGCATCAACTGCGTTATATGTGTATCTA TATTCCATCTACTACTATCATGTAAAGACAAAGATGTCAGGTTTTTTCCAGACGAGTTTC TACTTCGGTTACACATTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGGTGCTATTGGC TATCTAGGGTCAACTCTTTTTGTGAGGAGAATCTACAGAAACATCAAATGTGATTAG

Peptide Sequence

PEP ID	Os12t0175700-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3855819:3860795:1 gene:Os12g0175700 transcript:Os12t0175700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os12t0175700-01)
Sequence	MLLPTSASACRGSGRALLLALAAALLALATPRPASASESDHKYKVEEPVKLWVNKVGPYN NPQETYNYHSLPFCQPSENPAHKWGGLGEVLGGNELIDSQIDIKFLRNEERGSICTLELD SKKVQQFSDAIDNSYWFEFFMDDLPLWGFVGETDKNNENKRYLYTHKSILVKYNDNRIIH VNLTQESPKLLEAGKKLDMTYSVKWLQTDVTFARRFEVYLDYPFFEHQIHWFSIFNSFMM VIFLTGLVSMILMRTLRNDYAKYAREDDDLESLERDVNEESGWKLVHGDVFRPPRSLAFL SAVVGIGTQLAALILLVIVLAIVGMLYVGRGSIITTFIVCYALTSFISGYVSGGLYSRNG GKNWIKAMILTASLFPFLCFAIGFVLNTIAIFYRSLAAIPFGTMVVMFVLWAFISFPLVL LGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTS FWNYKVYYVYGFMLLVFVILLIVTICVTIVGTYFLLNAENYHWQWTSFLSAASTALYVYL YSIYYYHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAIGYLGSTLFVRRIYRNIKCD

Transcript Sequence

Transcript ID	Os12t0175700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3855819:3860795:1 gene:Os12g0175700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nonaspanin (TM9SF) family protein. (Os12t0175700-01)
Sequence	AGCTCGTGAGTCGACCCGACCCTCCTCAGATCTCGCCGGCGGCAGCGGCGGCATGCTGCT CCCCACCTCCGCCTCCGCCTGCCGCGGCAGCGGCCGCGCGCTCCTCCTCGCCCTCGCCGC CGCCCTCCTCGCCCTCGCCACGCCGCGCCCCGCCTCCGCCTCCGAGTCAGACCACAAGTA CAAAGTTGAAGAACCAGTTAAGCTCTGGGTGAACAAAGTCGGCCCTTACAATAATCCACA AGAAACTTACAACTATCACAGCCTTCCATTTTGTCAACCATCTGAGAACCCTGCGCATAA ATGGGGTGGTCTTGGAGAGGTCCTGGGTGGAAATGAGCTGATTGATAGTCAGATTGACAT AAAGTTCTTAAGAAATGAGGAGAGGGGCTCCATTTGTACACTTGAGCTTGATTCTAAAAA GGTTCAGCAGTTCTCCGATGCCATTGATAACTCATACTGGTTCGAGTTTTTCATGGATGA TCTGCCTCTTTGGGGTTTTGTTGGGGAGACGGACAAAAACAATGAAAACAAGCGTTATCT CTACACACACAAGAGCATTCTTGTCAAATACAATGATAACAGGATCATTCATGTTAATCT CACCCAAGAGTCTCCTAAGCTTCTTGAAGCTGGTAAGAAATTGGACATGACATATTCAGT GAAGTGGTTACAAACAGATGTGACCTTTGCACGCCGCTTTGAAGTATACCTGGATTATCC TTTCTTTGAGCACCAGATTCATTGGTTCTCCATTTTCAATTCTTTCATGATGGTTATTTT CCTCACTGGTTTGGTTTCAATGATATTGATGCGGACATTGAGAAATGACTATGCAAAGTA TGCTCGTGAAGATGATGATCTGGAGTCACTGGAGAGAGATGTTAATGAGGAATCTGGATG GAAGCTTGTTCATGGTGATGTATTTCGCCCTCCTCGAAGTTTGGCCTTTCTTTCTGCAGT TGTTGGCATCGGCACTCAGCTGGCAGCTCTTATCCTTCTTGTTATTGTATTGGCCATTGT TGGCATGCTATATGTTGGGCGAGGGTCTATCATCACAACCTTCATTGTGTGCTATGCTCT TACATCTTTTATTTCTGGCTATGTCAGTGGTGGCCTCTACTCAAGGAATGGTGGTAAAAA CTGGATAAAGGCTATGATCCTTACAGCATCCCTATTTCCATTCTTGTGCTTTGCAATTGG CTTTGTTCTGAATACAATTGCTATCTTCTACCGATCATTAGCGGCAATACCATTCGGCAC AATGGTTGTCATGTTCGTTCTTTGGGCCTTCATTTCTTTTCCGCTGGTGCTTCTGGGAAC TGTTGTTGGTAGGAACTGGAGTGGTGCTCCTAACAATCCCTGCCGAGTAAAGACTATTCC ACGGCCTATTCCAGAGAAGAAGTGGTACCTTACACCTTCTGTTATCTCATTGATGGGTGG GCTGCTTCCCTTTGGCAGTATCTTCATTGAGATGTACTTTGTGTTCACGTCATTCTGGAA CTACAAGGTTTATTATGTCTACGGCTTCATGCTGCTGGTCTTTGTCATCCTTCTAATAGT TACAATCTGTGTCACTATTGTGGGTACTTATTTCTTGCTGAATGCTGAGAACTATCACTG GCAATGGACTTCATTTCTCTCTGCTGCATCAACTGCGTTATATGTGTATCTATATTCCAT CTACTACTATCATGTAAAGACAAAGATGTCAGGTTTTTTCCAGACGAGTTTCTACTTCGG TTACACATTGATGTTCTGCCTTGGTCTAGGCATACTTTGTGGTGCTATTGGCTATCTAGG GTCAACTCTTTTTGTGAGGAGAATCTACAGAAACATCAAATGTGATTAGATGATCGCAGT TTGGAAGACATAGCAGATCACATGTTGTCACTGGAACTGTGGTAGAGAGGCCAAGAAGTG GATTAATGCTAGATGCTGATTAAGTTTTTTGAGCCACAGACCGAAGGGGGGCCATGATCT CCTAACTTAATATAAATACATTCATACGCCTACTCTCTTTTTTGACTATGTCGCCCTGAT TATGCATACCTGTGGTAGTTGAGGATTTGGTTGGTTTTTTAATCAGAAGTAGGATGTAAC ATTGTAACATGTGAAATATTCATGCGGCACT