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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0175500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:3849391:3853357:-1 gene:Os12g0175500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTAREDOXIN 27 description:Similar to Glutaredoxin-like protein. (Os12t0175500-01)
Sequence

ATGGCGACCTCCTCCGCCGCCGCCGCGCTCCGGCTTCCCGCCTCCCAGCTCCCCCTCTCC
GCGCGCCCCTCCTCCTCCTCCACCCTCCGCTTCCCTCCCCGCCGCCCCGCGCGCCGGGGA
GGCCTCGCGGTCTCCGCCTTCACGAAGCTCTCCGAGGCGTCCCCCGTCGCCATCCCACCG
GAGCCCGCGCAGCCGTTGCCGGACGAGGAAGCCCTGCCCCCCAAGCCCGGGGTCTACGGG
GTGTACGACCCCGCCGGCGAGCTGCAGTTCGTCGGGATATCGCGCAACGTCAGGGCCAGC
GTCGAGGGCCACCGCCGGAAGGTGCCCGCCGACCTTTGCGGCTCCGTCAAGGTTTCAATA
GCAGATGAGGAGACACCAGATCGAACTGTCCTGACTAATGCCTGGAAGTCATGGTTGGAA
GAACATATAACAGCCACCGGAAAGGCACCGCCGGGGAATGTTGCTGGAAACCACACCTGG
GTTGGACCTCCACAGAGGCCTCCGGACTTGCGATTGACACCTGGCCGCCATGTTCAGCTA
ACCGTGCCACTGGAACAATTGATTGATCGGTTAGTGAAGGACAACAAAGTGGTCGCGTTC
ATCAAAGGATCAAGGAGCGCACCCCAGTGCGGTTTCTCGCAAAGGGTTGTGGGAATCTTG
GAATCACATGGAGTAGATTTTGTAACCGTTGATGTTCTTGACGAGGAGCACAACCATGGG
TTGCGAGAAACCCTGAAGACATACAGCAACTGGCCGACTTTCCCACAGGTTTTTGTTGGA
GGGGAGCTTGTGGGTGGATGTGACATTGTTTCATCCATGGCCGAGAAGGGGGAGCTTGCT
GCCCTTTTTAAGAAATAG

Peptide Sequence

PEP ID

Os12t0175500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:3849391:3853357:-1 gene:Os12g0175500 transcript:Os12t0175500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTAREDOXIN 27 description:Similar to Glutaredoxin-like protein. (Os12t0175500-01)
Sequence

MATSSAAAALRLPASQLPLSARPSSSSTLRFPPRRPARRGGLAVSAFTKLSEASPVAIPP
EPAQPLPDEEALPPKPGVYGVYDPAGELQFVGISRNVRASVEGHRRKVPADLCGSVKVSI
ADEETPDRTVLTNAWKSWLEEHITATGKAPPGNVAGNHTWVGPPQRPPDLRLTPGRHVQL
TVPLEQLIDRLVKDNKVVAFIKGSRSAPQCGFSQRVVGILESHGVDFVTVDVLDEEHNHG
LRETLKTYSNWPTFPQVFVGGELVGGCDIVSSMAEKGELAALFKK

Transcript Sequence

Transcript ID

Os12t0175500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:3849391:3853357:-1 gene:Os12g0175500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTAREDOXIN 27 description:Similar to Glutaredoxin-like protein. (Os12t0175500-01)
Sequence

ACAGCCATGGCGACCTCCTCCGCCGCCGCCGCGCTCCGGCTTCCCGCCTCCCAGCTCCCC
CTCTCCGCGCGCCCCTCCTCCTCCTCCACCCTCCGCTTCCCTCCCCGCCGCCCCGCGCGC
CGGGGAGGCCTCGCGGTCTCCGCCTTCACGAAGCTCTCCGAGGCGTCCCCCGTCGCCATC
CCACCGGAGCCCGCGCAGCCGTTGCCGGACGAGGAAGCCCTGCCCCCCAAGCCCGGGGTC
TACGGGGTGTACGACCCCGCCGGCGAGCTGCAGTTCGTCGGGATATCGCGCAACGTCAGG
GCCAGCGTCGAGGGCCACCGCCGGAAGGTGCCCGCCGACCTTTGCGGCTCCGTCAAGGTT
TCAATAGCAGATGAGGAGACACCAGATCGAACTGTCCTGACTAATGCCTGGAAGTCATGG
TTGGAAGAACATATAACAGCCACCGGAAAGGCACCGCCGGGGAATGTTGCTGGAAACCAC
ACCTGGGTTGGACCTCCACAGAGGCCTCCGGACTTGCGATTGACACCTGGCCGCCATGTT
CAGCTAACCGTGCCACTGGAACAATTGATTGATCGGTTAGTGAAGGACAACAAAGTGGTC
GCGTTCATCAAAGGATCAAGGAGCGCACCCCAGTGCGGTTTCTCGCAAAGGGTTGTGGGA
ATCTTGGAATCACATGGAGTAGATTTTGTAACCGTTGATGTTCTTGACGAGGAGCACAAC
CATGGGTTGCGAGAAACCCTGAAGACATACAGCAACTGGCCGACTTTCCCACAGGTTTTT
GTTGGAGGGGAGCTTGTGGGTGGATGTGACATTGTTTCATCCATGGCCGAGAAGGGGGAG
CTTGCTGCCCTTTTTAAGAAATAGGACTCACTCTGGAGTGCTTAAGTAATGCCTTGAACT
ACTGTTACCTGATGCGAATCGCTAGCTTGGCAGCTACCATCATTTTACATGCTGCAGTAA
TGCTTCATTTACTGCAAGGCACATTGGTTTGGATCAGTTATACATATACACGTTTCTTTG
ATTCAGATGAGGAAATGCTGTAAATTGTAATATGGTGGTTGCTTTTTGAGAGAGGATTTG
CAAGGGCAGAGGGCTGTCAGTATTTTGTGGTCGTTTCAGATTTTGTACGTGAAAATTTGT
ATCGTTATGAGAAGTGAAAAATTGTATCGTTATGAG