Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0174800-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:3792161:3797454:-1 gene:Os12g0174800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 127, protein tyrosine phosphatase 1 description:Protein-tyrosine phosphatase, receptor/non-receptor type domain containing protein. (Os12t0174800-01);Protein-tyrosine phosphatase, receptor/non-receptor type domain containing protein. (Os12t0174800-02);Conserved hypothetical protein. (Os12t0174800-03)
Sequence	ATGGCCGCCGCCCGCTTCGCCGGTGTCCCTCGCCGCGCGGCGCAGTCGTCGTCGTCGTCG TCCCAGGCGCCCCTCGACGAGCCGCCTCCGCCGGCGCTGACGCCCGAGCAGGTCGGTCTA TGCAGGGAGGCGCTCGAGTACTTCGAGGGGATGTGTGGCCGGCCGGAAGCCATGTCCGAC GAGTTCAGGAGACTCCAGGACACGAGACACGAGCTGATGAGAAGTTCTAATGAAGCTCGT AATGCTGCAAATAGGGAGAAAAACCGCTATATTGATGTCGTACCATTTGATACTACCAGG GTAAGGCTAAAACGATCAACCACCAGTCAGACTTCAAGCAATGATTATATCAATGCAAGC TTTATAAAGGTCACTGAGGACAACAGAGTTGCAAAATTTATTTCCACTCAAGGTCCACTA GCCAAGACATTTGATGATTTCTGGGAAATGGTCTATGAATATCAATGTCCTGTTATTGTT ATGCTCACACAATTCGACAGTCTTAAGTGTGATGAATATCTTCCATTACGCAAGCAACGT GAAGCGTATGGAAAGTACAATGTTAAGATTACAAATGCCAAAAGAGATAGCCATCAGTTA TGGTTGCGTGATGTGATGGTGCAATGCAACGAGTCAAGCAGGGTTCATTCTGTACGCCAT ATAGAATATCCTGATTGGCCTGATCATGGAGTTCCAACTAATACTGATGCTGTAAGACAA ATTCGAAAATGGTTACAAAATACTCCGATGGAGCATCCTATAGTTGTACACTGCAGTGCG GGCATTGGAAGAACCGGTGCTTACATAACTATCCATAGTACAATTGAGAGACTTCTCCTT GGTGATAAAAGCTCATATCATCTTGATGAAACTGTCAAAACTTTGAGAACCCAACGAGTT GGAATGGTCCAAACTGAGAAACAATACATGTTCTGCTATCGTGCAATTGCTGATGAGCTG AAAGATCTTTTGGAGTCTAACCGCTGA

Peptide Sequence

PEP ID	Os12t0174800-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:3792161:3797454:-1 gene:Os12g0174800 transcript:Os12t0174800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 127, protein tyrosine phosphatase 1 description:Protein-tyrosine phosphatase, receptor/non-receptor type domain containing protein. (Os12t0174800-01);Protein-tyrosine phosphatase, receptor/non-receptor type domain containing protein. (Os12t0174800-02);Conserved hypothetical protein. (Os12t0174800-03)
Sequence	MAAARFAGVPRRAAQSSSSSSQAPLDEPPPPALTPEQVGLCREALEYFEGMCGRPEAMSD EFRRLQDTRHELMRSSNEARNAANREKNRYIDVVPFDTTRVRLKRSTTSQTSSNDYINAS FIKVTEDNRVAKFISTQGPLAKTFDDFWEMVYEYQCPVIVMLTQFDSLKCDEYLPLRKQR EAYGKYNVKITNAKRDSHQLWLRDVMVQCNESSRVHSVRHIEYPDWPDHGVPTNTDAVRQ IRKWLQNTPMEHPIVVHCSAGIGRTGAYITIHSTIERLLLGDKSSYHLDETVKTLRTQRV GMVQTEKQYMFCYRAIADELKDLLESNR

Transcript Sequence

Transcript ID	Os12t0174800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3792161:3797454:-1 gene:Os12g0174800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 127, protein tyrosine phosphatase 1 description:Protein-tyrosine phosphatase, receptor/non-receptor type domain containing protein. (Os12t0174800-01);Protein-tyrosine phosphatase, receptor/non-receptor type domain containing protein. (Os12t0174800-02);Conserved hypothetical protein. (Os12t0174800-03)
Sequence	CCATCGCTTCCGCCACCACCGCAGCGGCGGCGGCGGCGATTCCGGCGAGCCCCTCTCCTC CCGCCTCCGGCCAGTACGCTCCCACCGCGGCGGCCACGGGGAACGGCACGAGCTCCCGCG GCAGGGCGATGGCCGCCGCCCGCTTCGCCGGTGTCCCTCGCCGCGCGGCGCAGTCGTCGT CGTCGTCGTCCCAGGCGCCCCTCGACGAGCCGCCTCCGCCGGCGCTGACGCCCGAGCAGG TCGGTCTATGCAGGGAGGCGCTCGAGTACTTCGAGGGGATGTGTGGCCGGCCGGAAGCCA TGTCCGACGAGTTCAGGAGACTCCAGGACACGAGACACGAGCTGATGAGAAGTTCTAATG AAGCTCGTAATGCTGCAAATAGGGAGAAAAACCGCTATATTGATGTCGTACCATTTGATA CTACCAGGGTAAGGCTAAAACGATCAACCACCAGTCAGACTTCAAGCAATGATTATATCA ATGCAAGCTTTATAAAGGTCACTGAGGACAACAGAGTTGCAAAATTTATTTCCACTCAAG GTCCACTAGCCAAGACATTTGATGATTTCTGGGAAATGGTCTATGAATATCAATGTCCTG TTATTGTTATGCTCACACAATTCGACAGTCTTAAGTGTGATGAATATCTTCCATTACGCA AGCAACGTGAAGCGTATGGAAAGTACAATGTTAAGATTACAAATGCCAAAAGAGATAGCC ATCAGTTATGGTTGCGTGATGTGATGGTGCAATGCAACGAGTCAAGCAGGGTTCATTCTG TACGCCATATAGAATATCCTGATTGGCCTGATCATGGAGTTCCAACTAATACTGATGCTG TAAGACAAATTCGAAAATGGTTACAAAATACTCCGATGGAGCATCCTATAGTTGTACACT GCAGTGCGGGCATTGGAAGAACCGGTGCTTACATAACTATCCATAGTACAATTGAGAGAC TTCTCCTTGGTGATAAAAGCTCATATCATCTTGATGAAACTGTCAAAACTTTGAGAACCC AACGAGTTGGAATGGTCCAAACTGAGAAACAATACATGTTCTGCTATCGTGCAATTGCTG ATGAGCTGAAAGATCTTTTGGAGTCTAACCGCTGAGGTATCCCTAAGGCAGGAATTATGG ACATGTCTGTTTATCTCACCCTTAAATTCCTATAATCTGAATGAATGCCTGATTGGAGCA CACCATTTCTGCATTGACTGAACCGTTTGAAGCTTAGCACTTTTATTTTGGGTGCACGAT TACTTCTGAATAGATTTGACTGCATCAGTACCGCCATGTCACTTTCATTTCATTACCTCT AAATTGTTGTTATTGCTGCTCTCACGGAATTAAAGAGAGTTAGTAGGTTTAGAACTATTG GTGGCATTGTGCCTGTACTTATTGTGCAGCGAAGAATGGTTCATTGCTTGGATTTTAACG GAATCACGTACCT