Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0171600-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:3636454:3637403:1 gene:Os12g0171600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0171600-01)
Sequence

ATGGAGGTGGATATGGAAGCGGAGGGTGCGAGCGGCGAGCTCGGCCACAAGAGGGCGGAT
CTGGAGAAGCCCACGGAGGAGGAGAGAGCTTCTAACGGCGGCGGCGACGCCGCCAAGACG
CCGTCGGAGGATCACCACGACAGTGCCCGCCGCCGCGCCATGGCGATGGAGAATGACGAC
GACGACGACGAGTACTACGACGAACCCCTTCCGAATCCCTTGGACGCCTACCGCCAGAGC
TGGGCCCGTTCCTACGGCACCAATGGCGCCACCTTCGAGGACGAGACGGATCTCCCTCCT
ATGCCAAACACAGACATTCCAGTGCTGCCCCCTTCTGCGCAGCCTATGGAAACAATGCAG
GTCTTCACGGTGAAGGTGACCCAGATCACCGGCGGCCTCCGGTGGCCGCTCGGCGTCTAC
GGCGTGGTCGCCGTGCGAGACTCCATGGACCACAAGCGCAACGTCCTCTTCCGCCGCGGC
AGGAACGAATGCCAGACCCTAACTTCGCTGCAGGCATGTGCAAATTGTTCCTACCCCATT
ATCTTATAA

Peptide Sequence

PEP ID

Os12t0171600-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:3636454:3637403:1 gene:Os12g0171600 transcript:Os12t0171600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0171600-01)
Sequence

MEVDMEAEGASGELGHKRADLEKPTEEERASNGGGDAAKTPSEDHHDSARRRAMAMENDD
DDDEYYDEPLPNPLDAYRQSWARSYGTNGATFEDETDLPPMPNTDIPVLPPSAQPMETMQ
VFTVKVTQITGGLRWPLGVYGVVAVRDSMDHKRNVLFRRGRNECQTLTSLQACANCSYPI
IL

Transcript Sequence

Transcript ID

Os12t0171600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:3636454:3637403:1 gene:Os12g0171600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0171600-01)
Sequence

GAGGACGAGACAAACCCTAAACCCGCCGGCGGCGTGCGGCGGCGGCGGTAATGGAGGTGG
ATATGGAAGCGGAGGGTGCGAGCGGCGAGCTCGGCCACAAGAGGGCGGATCTGGAGAAGC
CCACGGAGGAGGAGAGAGCTTCTAACGGCGGCGGCGACGCCGCCAAGACGCCGTCGGAGG
ATCACCACGACAGTGCCCGCCGCCGCGCCATGGCGATGGAGAATGACGACGACGACGACG
AGTACTACGACGAACCCCTTCCGAATCCCTTGGACGCCTACCGCCAGAGCTGGGCCCGTT
CCTACGGCACCAATGGCGCCACCTTCGAGGACGAGACGGATCTCCCTCCTATGCCAAACA
CAGACATTCCAGTGCTGCCCCCTTCTGCGCAGCCTATGGAAACAATGCAGGTCTTCACGG
TGAAGGTGACCCAGATCACCGGCGGCCTCCGGTGGCCGCTCGGCGTCTACGGCGTGGTCG
CCGTGCGAGACTCCATGGACCACAAGCGCAACGTCCTCTTCCGCCGCGGCAGGAACGAAT
GCCAGACCCTAACTTCGCTGCAGGCATGTGCAAATTGTTCCTACCCCATTATCTTATAAA
AGTTGCTCGGTATCAAAATTTACGACTTAAACATGTTGCGTTGGAATATATGTCTTAGAA
ATATAAGTTAATTGTTTGTTTGGAATCACAGTAAAAGATATTCATTTGGATGTTAACGTG
ATATTCGATTAAAGTTAACATTAACATTCAGGGGTTTGTCCGCCGCTGACTAGTGGTGGT
TTACAGGCCGCCAGTTCGACGAC