Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0171200-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:3619385:3626426:1 gene:Os12g0171200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to tRNA adenylyltransferase-like protein. (Os12t0171200-01)
Sequence

GGCCTCCTCCTCCTCCCTCTCCTCCGCCGCCGCAGCTGCTCCCCTCTCCTCCTCCGCCGC
CGCCGCCTCCTTCGCGGTTGGCCTCCGCCGCTCGTCTCAGCGATCCCATCTAGAGCCTTC
GGTTCCTCCGGCTTACCCGCCCGAGCCTGCGCTTCCTCCGGCTTCTCGGGCATGGCGGCG
GTGTCTCCGCCGACGCCGCAGCAGCAGCAGCAGCGGTGCGTGGTGGAGGTGAGGGAGGGC
GTGGAGCTGACGGAGAAGGAGGAGCGGATCTTCCGTCGCCTGCTCGATGTCGTCCGCCAC
TTCGGCCTCGGCACCCAGCTCCGCGTCGCCGGCGGCTGGGTCAGGGACAAGCTATTGGGG
AAAGACTCCACTGACATTGATATTGCACTTGATAATATGACGGGCCAGAATTTCTGCGAG
AAAGTAAATGAGTATTCAGAATTATTGGGTGAGGAACAGAAAGGAATTGGCGTTATTCAG
TGCAATCCTGATCAATCAAAGCACTTGGAAACTGCAAGGATGCTTATATTCGACATTTGG
ATTGACTTTGTCAACTTGAGGTCTGAAAAATATGCTGAAAACAGTCGGATTCCTACCGTG
GAGATTGGTACAGCCAAAGAAGATGCATTCCGTAGGGACCTAACAATAAATAGTTTATTC
TTCAATATCAACACTAACACAGTGGAAGATTTAACCGGAAGAGGTATTGAAGATCTGAAA
AAGGGTCTTATTGTTACTCCTTTACCTGCCAAAGCTACCTTCTTGGATGACCCCCTTAGA
GTTCTTCGAGCAATCCGATTTGCTGCTAGATTCAACTTTACATTAACTGAAGATTTGAAA
GATGCTGCTTCTGATGAAAAGGTGAAGTCTGAACTTGGTAGCAAGATTAGCAAAGAGCGC
ATCGGTCATGAGGTAGATCTTATGATGTCAGACAAACATCCTGTTAATGCAATGTGTTAT
ATTCGTGATTTGGGGTTATTTTATGTTGTCTTTGCTTTTCCTGAGAAGCCCGACCCTCCA
GTTCCTGACAAATGTGACCGGCTTTGTGTTTCACATATTGAAGTTGCATGGAATCTTGCT
CATTCTATTGGCTGCTCTGTGTTCAGTGGTGGTTCTGATTCCAAGTCACAGGATGAGCAC
CGAAGGCTTTGCTTTTATAGTGCACTATTCACTCCTGTTCGGAATACAATATATTTGGAT
AAAAAGTCGAAGAAGATTCCTGTCACTAACTATATTATTCGTGACTCTCTGAAGTTAAAA
GCTAGTGATGCTGACACGGTTGTCAACGTACATGCTGCAAGTGAAAAGTTTGCTGAATTA
ATTAATCTCCTTGAGTCGAATGAAAATCTGACAACTGTGAAAGAGAAATTGGATGATGAA
TACCTTGAGATCCCAACAGACTCAGTTAAACGTGTTTTGGCAGGGCTTATACTTCGGGAG
ATAAAGGACTTTTGGCGTGTGGCACTGTTTATCTGCACTCTTACCTACCCGGAGGTTAGC
AGTGGTGGTGATTCTCTCGGCCAGCCAGACGAATTACATCAAAGGAAAGAAAAATACACA
AGAGCTGAACGTTTAATAACTGAACTGGAGCTTGATGGCGTATGGAAGATGAAACCGTTG
CTTGATGGGAAGGCCATTATGGGGATTATGCAGGTCAAGGGAGGTCCACTTATCGGAAAA
TGGCAACAACGACTGTTGAAGTGGCAGCTTGCTTATCCAAGGGGAACCACGGAGGAGTGC
ATCGAGTGGATGAAGCAGTCGCAGTCGAAACGGCAAAAAGTATAG

Peptide Sequence

PEP ID

Os12t0171200-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:3619385:3626426:1 gene:Os12g0171200 transcript:Os12t0171200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to tRNA adenylyltransferase-like protein. (Os12t0171200-01)
Sequence

GLLLLPLLRRRSCSPLLLRRRRLLRGWPPPLVSAIPSRAFGSSGLPARACASSGFSGMAA
VSPPTPQQQQQRCVVEVREGVELTEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKLLG
KDSTDIDIALDNMTGQNFCEKVNEYSELLGEEQKGIGVIQCNPDQSKHLETARMLIFDIW
IDFVNLRSEKYAENSRIPTVEIGTAKEDAFRRDLTINSLFFNINTNTVEDLTGRGIEDLK
KGLIVTPLPAKATFLDDPLRVLRAIRFAARFNFTLTEDLKDAASDEKVKSELGSKISKER
IGHEVDLMMSDKHPVNAMCYIRDLGLFYVVFAFPEKPDPPVPDKCDRLCVSHIEVAWNLA
HSIGCSVFSGGSDSKSQDEHRRLCFYSALFTPVRNTIYLDKKSKKIPVTNYIIRDSLKLK
ASDADTVVNVHAASEKFAELINLLESNENLTTVKEKLDDEYLEIPTDSVKRVLAGLILRE
IKDFWRVALFICTLTYPEVSSGGDSLGQPDELHQRKEKYTRAERLITELELDGVWKMKPL
LDGKAIMGIMQVKGGPLIGKWQQRLLKWQLAYPRGTTEECIEWMKQSQSKRQKV

Transcript Sequence

Transcript ID

Os12t0171200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:3619385:3626426:1 gene:Os12g0171200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to tRNA adenylyltransferase-like protein. (Os12t0171200-01)
Sequence

GGCCTCCTCCTCCTCCCTCTCCTCCGCCGCCGCAGCTGCTCCCCTCTCCTCCTCCGCCGC
CGCCGCCTCCTTCGCGGTTGGCCTCCGCCGCTCGTCTCAGCGATCCCATCTAGAGCCTTC
GGTTCCTCCGGCTTACCCGCCCGAGCCTGCGCTTCCTCCGGCTTCTCGGGCATGGCGGCG
GTGTCTCCGCCGACGCCGCAGCAGCAGCAGCAGCGGTGCGTGGTGGAGGTGAGGGAGGGC
GTGGAGCTGACGGAGAAGGAGGAGCGGATCTTCCGTCGCCTGCTCGATGTCGTCCGCCAC
TTCGGCCTCGGCACCCAGCTCCGCGTCGCCGGCGGCTGGGTCAGGGACAAGCTATTGGGG
AAAGACTCCACTGACATTGATATTGCACTTGATAATATGACGGGCCAGAATTTCTGCGAG
AAAGTAAATGAGTATTCAGAATTATTGGGTGAGGAACAGAAAGGAATTGGCGTTATTCAG
TGCAATCCTGATCAATCAAAGCACTTGGAAACTGCAAGGATGCTTATATTCGACATTTGG
ATTGACTTTGTCAACTTGAGGTCTGAAAAATATGCTGAAAACAGTCGGATTCCTACCGTG
GAGATTGGTACAGCCAAAGAAGATGCATTCCGTAGGGACCTAACAATAAATAGTTTATTC
TTCAATATCAACACTAACACAGTGGAAGATTTAACCGGAAGAGGTATTGAAGATCTGAAA
AAGGGTCTTATTGTTACTCCTTTACCTGCCAAAGCTACCTTCTTGGATGACCCCCTTAGA
GTTCTTCGAGCAATCCGATTTGCTGCTAGATTCAACTTTACATTAACTGAAGATTTGAAA
GATGCTGCTTCTGATGAAAAGGTGAAGTCTGAACTTGGTAGCAAGATTAGCAAAGAGCGC
ATCGGTCATGAGGTAGATCTTATGATGTCAGACAAACATCCTGTTAATGCAATGTGTTAT
ATTCGTGATTTGGGGTTATTTTATGTTGTCTTTGCTTTTCCTGAGAAGCCCGACCCTCCA
GTTCCTGACAAATGTGACCGGCTTTGTGTTTCACATATTGAAGTTGCATGGAATCTTGCT
CATTCTATTGGCTGCTCTGTGTTCAGTGGTGGTTCTGATTCCAAGTCACAGGATGAGCAC
CGAAGGCTTTGCTTTTATAGTGCACTATTCACTCCTGTTCGGAATACAATATATTTGGAT
AAAAAGTCGAAGAAGATTCCTGTCACTAACTATATTATTCGTGACTCTCTGAAGTTAAAA
GCTAGTGATGCTGACACGGTTGTCAACGTACATGCTGCAAGTGAAAAGTTTGCTGAATTA
ATTAATCTCCTTGAGTCGAATGAAAATCTGACAACTGTGAAAGAGAAATTGGATGATGAA
TACCTTGAGATCCCAACAGACTCAGTTAAACGTGTTTTGGCAGGGCTTATACTTCGGGAG
ATAAAGGACTTTTGGCGTGTGGCACTGTTTATCTGCACTCTTACCTACCCGGAGGTTAGC
AGTGGTGGTGATTCTCTCGGCCAGCCAGACGAATTACATCAAAGGAAAGAAAAATACACA
AGAGCTGAACGTTTAATAACTGAACTGGAGCTTGATGGCGTATGGAAGATGAAACCGTTG
CTTGATGGGAAGGCCATTATGGGGATTATGCAGGTCAAGGGAGGTCCACTTATCGGAAAA
TGGCAACAACGACTGTTGAAGTGGCAGCTTGCTTATCCAAGGGGAACCACGGAGGAGTGC
ATCGAGTGGATGAAGCAGTCGCAGTCGAAACGGCAAAAAGTATAGCGCAACACCTGAGAA
TCTTCTGCCACATCAACATTTTGCTGGAGCATTGGCAGTCTTCAGAATTCTGATAGGGCA
CAAACTTAACTTCCCAAGTTCCTAGGAGTGCAGCGTTATCTTGCGTGACATGTAACAGCG
CGTTGTTAGGAGTATAGCTTTATCTTGGCCGTCTTCTCTTCCGGGTATCCATGGTTGAAA
TTTGCAAAATTTTGTGGTCGAATATACTGTACTGTTATACCCTATGATGAAAGAGGAAAA
TACTTAGTGTATTAGAGGAGC