Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0170600-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:3583428:3587353:1 gene:Os12g0170600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-1,4-fucosyltransferase. (Os12t0170600-01)
Sequence

ATCCTCCTACCTATCGCCTCCCCCTCCTCCGAGACCGAGATCTCGCGCTCCGGCGAGGAG
GCGAAGCTTCCAGAAGCTTCCGGAGGAGGAGGAGGGGCGCGCCACCTCGATGCTCTTCCC
GAAGCGGATCAACTACATGGCCCCGATGCTGGCCTCCGCCGTCATCCTCCTCCTCCTCGT
CTCCGGCTACTTCGAGCTCCCGTCCATCTCCTCCTACTCCGCCGCGCCGGCGCCGCCGCT
CTTCGCCACGGCGCTGGACGCCGTCGGCACCCGCGAGCGGTCGCCGTTCACGTCGCTTCT
CTCGGCCTTCGCCGACTGGGACGCCGCCGTCGGGTGCCCGCGCATCCGCGCCAAGCTCGA
CGCCGTGGGGGCGCCCGGGTACGGCGCCAACTCGACCGCGGCGGCGGCCGCGTCGATCAC
CGGCGGGGCCGGGTGGGGCGGCGGCGGCGGCGGGAGGTGCGAGGGCGTGAGGACGCGCTC
GACGGGGTGTACACGTGCCGGTGCGGGGTGAGCTGCGTGTGGAGCAAGTCCGCCGCCGCC
GTCGACCGGCCCGACGCGCTGCTCTTCGAGGGCGCCACGCCGCCGCCGCAGAGAATGAAA
GGCCTGCCTCTTCGTGTATATCTGGATCTGGAGGCTGCTAGGAAACCAACTGGTTTCGAG
GACATTTTTATAGGTTACCATGCTAAAGATGATGTGCAAGTAACATATGCTGGAAAATCA
TTCCACACTAGCCGAAGTTACCATGTATCAACTGAAAAGAGAAATGATGCACTTATTTAC
TGGTCATCTTCAAGGTGTCTTCCTCATAGAGACAAGGTTGCAAAAGATTTCCTGTCATTG
GTTCCGCACCACTCTTTCGGGAAATGCTTGAATAATGTTGATGGTCCTGACATGGCATTA
TCCATGTATCCAGTTTGTTCAACCAATGATAATGGAAAACCACACTGGTGGGATCATCTT
CACTGCGCAATGTCACATTACAAGTTTGTTCTTGCAATTGAGAATACTAAGACAGAAAGC
TATGTGACCGAGAAATTGTTCTATGCCTTGGAGGCTGGGTCAGTGCCAATATACTTCGGG
GCACCCAATGTCTGGGACTTCATTCCTCCCAATTCTATTATAGATGCCTCAAAATTCAGC
TCACTCCGTGAGTTGGCATCATATGTGAAAGCTGTTGCAAATGATCCCGTAGCCTATGCA
GAATACCATGCATGGAGGAGGTGTGGTACCCTGGGTAACTTTGGAAGGTCGCGTGAAATG
AGCCTTGACACACTGCCTTGCCGACTTTGTGAACTAGTTAGTAAGAGAGGTGGTAGAAAT
GCAGATGCATTGTGA

Peptide Sequence

PEP ID

Os12t0170600-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:3583428:3587353:1 gene:Os12g0170600 transcript:Os12t0170600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-1,4-fucosyltransferase. (Os12t0170600-01)
Sequence

ILLPIASPSSETEISRSGEEAKLPEASGGGGGARHLDALPEADQLHGPDAGLRRHPPPPR
LRLLRAPVHLLLLRRAGAAALRHGAGRRRHPRAVAVHVASLGLRRLGRRRRVPAHPRQAR
RRGGARVRRQLDRGGGRVDHRRGRVGRRRRREVRGREDALDGVYTCRCGVSCVWSKSAAA
VDRPDALLFEGATPPPQRMKGLPLRVYLDLEAARKPTGFEDIFIGYHAKDDVQVTYAGKS
FHTSRSYHVSTEKRNDALIYWSSSRCLPHRDKVAKDFLSLVPHHSFGKCLNNVDGPDMAL
SMYPVCSTNDNGKPHWWDHLHCAMSHYKFVLAIENTKTESYVTEKLFYALEAGSVPIYFG
APNVWDFIPPNSIIDASKFSSLRELASYVKAVANDPVAYAEYHAWRRCGTLGNFGRSREM
SLDTLPCRLCELVSKRGGRNADAL

Transcript Sequence

Transcript ID

Os12t0170600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:3583428:3587353:1 gene:Os12g0170600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-1,4-fucosyltransferase. (Os12t0170600-01)
Sequence

AAAAGAGCCCCTCGAAAAACTTTTAATTCCACTCCACCTAATCCTGAATCCTCCTACCTA
TCGCCTCCCCCTCCTCCGAGACCGAGATCTCGCGCTCCGGCGAGGAGGCGAAGCTTCCAG
AAGCTTCCGGAGGAGGAGGAGGGGCGCGCCACCTCGATGCTCTTCCCGAAGCGGATCAAC
TACATGGCCCCGATGCTGGCCTCCGCCGTCATCCTCCTCCTCCTCGTCTCCGGCTACTTC
GAGCTCCCGTCCATCTCCTCCTACTCCGCCGCGCCGGCGCCGCCGCTCTTCGCCACGGCG
CTGGACGCCGTCGGCACCCGCGAGCGGTCGCCGTTCACGTCGCTTCTCTCGGCCTTCGCC
GACTGGGACGCCGCCGTCGGGTGCCCGCGCATCCGCGCCAAGCTCGACGCCGTGGGGGCG
CCCGGGTACGGCGCCAACTCGACCGCGGCGGCGGCCGCGTCGATCACCGGCGGGGCCGGG
TGGGGCGGCGGCGGCGGCGGGAGGTGCGAGGGCGTGAGGACGCGCTCGACGGGGTGTACA
CGTGCCGGTGCGGGGTGAGCTGCGTGTGGAGCAAGTCCGCCGCCGCCGTCGACCGGCCCG
ACGCGCTGCTCTTCGAGGGCGCCACGCCGCCGCCGCAGAGAATGAAAGGCCTGCCTCTTC
GTGTATATCTGGATCTGGAGGCTGCTAGGAAACCAACTGGTTTCGAGGACATTTTTATAG
GTTACCATGCTAAAGATGATGTGCAAGTAACATATGCTGGAAAATCATTCCACACTAGCC
GAAGTTACCATGTATCAACTGAAAAGAGAAATGATGCACTTATTTACTGGTCATCTTCAA
GGTGTCTTCCTCATAGAGACAAGGTTGCAAAAGATTTCCTGTCATTGGTTCCGCACCACT
CTTTCGGGAAATGCTTGAATAATGTTGATGGTCCTGACATGGCATTATCCATGTATCCAG
TTTGTTCAACCAATGATAATGGAAAACCACACTGGTGGGATCATCTTCACTGCGCAATGT
CACATTACAAGTTTGTTCTTGCAATTGAGAATACTAAGACAGAAAGCTATGTGACCGAGA
AATTGTTCTATGCCTTGGAGGCTGGGTCAGTGCCAATATACTTCGGGGCACCCAATGTCT
GGGACTTCATTCCTCCCAATTCTATTATAGATGCCTCAAAATTCAGCTCACTCCGTGAGT
TGGCATCATATGTGAAAGCTGTTGCAAATGATCCCGTAGCCTATGCAGAATACCATGCAT
GGAGGAGGTGTGGTACCCTGGGTAACTTTGGAAGGTCGCGTGAAATGAGCCTTGACACAC
TGCCTTGCCGACTTTGTGAACTAGTTAGTAAGAGAGGTGGTAGAAATGCAGATGCATTGT
GAATTGTGATAGACTGGACATGTACCTAGTTGGTATGTCAATGAAGATGAAGTGCTCGGA
TATCAGAAGAAAATAGTTTGATATTGTTGTCATAACACACTTTGTTTCTTTTGCGTTTTT
TGAATTTCTTTTTGTCTCCAGAGTTGAGAGATGTATACAGTAGTTAGGGATTCATGTTTG
TAGGAAAAAAAAAAGGTATGAATGCACATTATATCGCTAATATTATACGGTCTTTATGAC
CATCTGTCATACTGATGTCTTGAAGAAATGTGATAATACAGAATCAGCATTAACT