Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0170100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3566996:3571971:-1 gene:Os12g0170100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-binding protein. (Os12t0170100-01)
Sequence	ATGTGGGCGCTCCGCCGCGCGGGCAACCCCCTCAGGGTCCGTGCCCACCAAGCTTTGAGT GCCCGTGGTTGTGCAAACCTTGAAGTAATTCTAAATGCAGATGCAAAGAATGTGGAAGAG CATCATGAGGGGGACTGTCAGAAATTGGATTGCTGTCATCAACCAAAGCCATTGGTCTGC CAACCATCATTCTCATCAGGCCGTTTCATGTGGAGTAGGGGTTTCTCTTCTCAGGCCGGT GCAAGTTCTGGTGATAAGCAGGATGAGTTGGAGGAAGGGTTTTCTGATCTGGAGGTTCCA CCAGAAGCTCATAAAAAGGATTTAGATTTGACATCCGATGAGAGTTCTGATGAGGACACC ATTGATGCAATTGGCTTGTCTGAAGTGGAGGCTGATGCAAAACCTGAGGAGCCGATAAAG AAGTCACAATCCACTCTTCTTAAGGCTTTGCTGGAATCTCCAAGGGTTGATGTCGCTGGA GCATTGAAAAAATGGCTTAATGATGGCAATACATTGGATAGAAGTGAGCTCTTTTATGTC CTTCTTATTCTTCGGAGGCGGAAGCTCTACATCAAAGCCTTGCAGCTTCTGGAGTATGTT GAAGAATCCAAACTAATTGATCTTGGAGAACGTGATTATGCTTCACGCGTGGATTTGGTA GCTAAAACCCACAGTATTTACAAAGCTGAAAAGTACATTGAGAATGTTCCTGCATCTCAT AGGGGTGAGATTGTATACAGGACTCTTTTGGCTAACTGTGTGGCTATAGCCAATGTGAAA AAAGCAGAACAAGTCTTCAATAAGATGAAGGACCTTGGATTTCCAGTTAGCGTATTTTCT TGCAATCAGCTTCTGCTACTCTACAAGAGAGTGGACAAGAAGAAGCTTGGTGATGTTCTC ACAATGATGGAAAAGGAGAATGTGAAGCCTTCCCTCTTCACTTATAAGCTCCTTGTAGAT ACCAAGGGTGCTGCTAGAGATATTGAAGATATGGAAAAGGTCATTCAGGCAATGCAAGCG GATGGAATTGAACCAGATCTTCTGTTTCAAGCCACAATTGCAAGGCACTACATATTTGGT GGTTATCGTGAGAAATCTGAGGCAATTTTGGAGCAAATGGTGGGGGATGATATCAATGAA AACCGTTCTGCTTGCAAATTTGTTTTACCCCTGTATGCTTTTCTTGGCAAAAATGATGAT GTTGAAAGGATCTGGAAGGTTTGTGAGGCCAATGCTCGTCTAGATGAGTGCATGTCTGCA ATAGAGGCTTTTGGTAAGCTTGGGGATGTTGAAAAGGCTGAGGAGATATTTGACAATATG TTCAAGACATGGAAGACACTTTCGTCCAAATACTACAATGCTATGCTGAAGGTGTATGCC AACAAAAAGCTTTTTGACAAGGGGAAGGAGCTAGCAAAGCGGATGGGTGATGATGGTTGC AGACTAGGGCCCTATACATTGGATTCACTTGTGAAGCTCTATTCGGATGCAGGAGAGGTG GAGAAAGCTGATTCCATATTGCATAAGCTATCATATAAGAACAAGATTAAGCCTATGTAC ACCACATACTTGATGCTGCTTGATAGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAG AAATTGTTCAGCAAGGTGCGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTG CTTCTTGAGGCATATCTGAATGCAAAGACCCCACCTTATGGATTCAAGGAGAGGATGAAG GCTGATGACATTTTCCCCAATAGGGCTGTGGCGTCTTTGCTTGCTGCTACCGATCCATTC AACAGGAAGAACGCAATGTCTGAATTGCTCGATTAG

Peptide Sequence

PEP ID	Os12t0170100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3566996:3571971:-1 gene:Os12g0170100 transcript:Os12t0170100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-binding protein. (Os12t0170100-01)
Sequence	MWALRRAGNPLRVRAHQALSARGCANLEVILNADAKNVEEHHEGDCQKLDCCHQPKPLVC QPSFSSGRFMWSRGFSSQAGASSGDKQDELEEGFSDLEVPPEAHKKDLDLTSDESSDEDT IDAIGLSEVEADAKPEEPIKKSQSTLLKALLESPRVDVAGALKKWLNDGNTLDRSELFYV LLILRRRKLYIKALQLLEYVEESKLIDLGERDYASRVDLVAKTHSIYKAEKYIENVPASH RGEIVYRTLLANCVAIANVKKAEQVFNKMKDLGFPVSVFSCNQLLLLYKRVDKKKLGDVL TMMEKENVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQADGIEPDLLFQATIARHYIFG GYREKSEAILEQMVGDDINENRSACKFVLPLYAFLGKNDDVERIWKVCEANARLDECMSA IEAFGKLGDVEKAEEIFDNMFKTWKTLSSKYYNAMLKVYANKKLFDKGKELAKRMGDDGC RLGPYTLDSLVKLYSDAGEVEKADSILHKLSYKNKIKPMYTTYLMLLDSYSKKGDVHNAE KLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAATDPF NRKNAMSELLD

Transcript Sequence

Transcript ID	Os12t0170100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3566996:3571971:-1 gene:Os12g0170100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-binding protein. (Os12t0170100-01)
Sequence	AGGGTTAGCCGGCAGAGGAGAGGGCTCAAAGCCCCGTGCACGCGCCGCCTCTCCCTCCGC TGCGCTCCTCGCCTCCTCTCGGCTCTCGCTCTGCGCCACAGGCCCACAGCGCCGGCCGTC GCCCATCGGCGGCGTCGGGTCCCTCTCCCTCCTGCAGTCCTGCTCGAGCTCGACGACGAC GACGAGTCTATGCCTCAAGCCCTAAACAGCTCCTCATAGGACCACCCAACGAATCGATCC TAGAGCCGCCACTGCATCGTCTCCTCGTCCGCCGCCGCCGCCATGTGGGCGCTCCGCCGC GCGGGCAACCCCCTCAGGGTCCGTGCCCACCAAGCTTTGAGTGCCCGTGGTTGTGCAAAC CTTGAAGTAATTCTAAATGCAGATGCAAAGAATGTGGAAGAGCATCATGAGGGGGACTGT CAGAAATTGGATTGCTGTCATCAACCAAAGCCATTGGTCTGCCAACCATCATTCTCATCA GGCCGTTTCATGTGGAGTAGGGGTTTCTCTTCTCAGGCCGGTGCAAGTTCTGGTGATAAG CAGGATGAGTTGGAGGAAGGGTTTTCTGATCTGGAGGTTCCACCAGAAGCTCATAAAAAG GATTTAGATTTGACATCCGATGAGAGTTCTGATGAGGACACCATTGATGCAATTGGCTTG TCTGAAGTGGAGGCTGATGCAAAACCTGAGGAGCCGATAAAGAAGTCACAATCCACTCTT CTTAAGGCTTTGCTGGAATCTCCAAGGGTTGATGTCGCTGGAGCATTGAAAAAATGGCTT AATGATGGCAATACATTGGATAGAAGTGAGCTCTTTTATGTCCTTCTTATTCTTCGGAGG CGGAAGCTCTACATCAAAGCCTTGCAGCTTCTGGAGTATGTTGAAGAATCCAAACTAATT GATCTTGGAGAACGTGATTATGCTTCACGCGTGGATTTGGTAGCTAAAACCCACAGTATT TACAAAGCTGAAAAGTACATTGAGAATGTTCCTGCATCTCATAGGGGTGAGATTGTATAC AGGACTCTTTTGGCTAACTGTGTGGCTATAGCCAATGTGAAAAAAGCAGAACAAGTCTTC AATAAGATGAAGGACCTTGGATTTCCAGTTAGCGTATTTTCTTGCAATCAGCTTCTGCTA CTCTACAAGAGAGTGGACAAGAAGAAGCTTGGTGATGTTCTCACAATGATGGAAAAGGAG AATGTGAAGCCTTCCCTCTTCACTTATAAGCTCCTTGTAGATACCAAGGGTGCTGCTAGA GATATTGAAGATATGGAAAAGGTCATTCAGGCAATGCAAGCGGATGGAATTGAACCAGAT CTTCTGTTTCAAGCCACAATTGCAAGGCACTACATATTTGGTGGTTATCGTGAGAAATCT GAGGCAATTTTGGAGCAAATGGTGGGGGATGATATCAATGAAAACCGTTCTGCTTGCAAA TTTGTTTTACCCCTGTATGCTTTTCTTGGCAAAAATGATGATGTTGAAAGGATCTGGAAG GTTTGTGAGGCCAATGCTCGTCTAGATGAGTGCATGTCTGCAATAGAGGCTTTTGGTAAG CTTGGGGATGTTGAAAAGGCTGAGGAGATATTTGACAATATGTTCAAGACATGGAAGACA CTTTCGTCCAAATACTACAATGCTATGCTGAAGGTGTATGCCAACAAAAAGCTTTTTGAC AAGGGGAAGGAGCTAGCAAAGCGGATGGGTGATGATGGTTGCAGACTAGGGCCCTATACA TTGGATTCACTTGTGAAGCTCTATTCGGATGCAGGAGAGGTGGAGAAAGCTGATTCCATA TTGCATAAGCTATCATATAAGAACAAGATTAAGCCTATGTACACCACATACTTGATGCTG CTTGATAGTTATTCCAAGAAAGGAGACGTCCATAATGCAGAGAAATTGTTCAGCAAGGTG CGGCAGATGGGTTATACTGGGAGGATTAGACAGTATCAGCTGCTTCTTGAGGCATATCTG AATGCAAAGACCCCACCTTATGGATTCAAGGAGAGGATGAAGGCTGATGACATTTTCCCC AATAGGGCTGTGGCGTCTTTGCTTGCTGCTACCGATCCATTCAACAGGAAGAACGCAATG TCTGAATTGCTCGATTAGGTTCTTCTGTTAGCTTCATTTTGTGCCCATCTAATACATGTG CTGGTTGTCCTTCTGCCAAAATATATATGACATGACGATGAGATAATAAATTAGCCTTAG CGATGTAATGAACTAGTAGTGTTTGCTTACCTTTTGCGGCTATTGCCTTACCGAGCAGGC GAGTAGGATTGGAATCTTATGAATGTTAATCTTAGTTCTATTTTGTCTACTTCATTGACG TGTCACTATCTCTTGACTTGTTAATTAGCAAACAAATGTCAGTTTTGCTAGTCCTTAAGC TAATGATATATTAAGGTTTCTTTAGGC