Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0169000-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:3503313:3509337:-1 gene:Os12g0169000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Amidase family protein, expressed. (Os12t0169000-00)
Sequence	ATGGCCGCCAAGGTGTACAAGCCGGCCGCCGAGGTCAATCTCGGCCCGGACAGCGACGAG TTCTACATCAGCCCTAACGTCAAAGCTCCTCGGGTAGCAGGGCTGCTGGTGAAGATCTTC GTGTGGATTCTTGAGATGCCGATCATCGGCTCAATGGTGCTTTACATCCTCAAGAAGGAT AATCTCATCAACAAGCTTGTCCAAGATGCTGAAATCCCAGAGCCTCCACTGTTCACTTCC ACACACAGCTGGGAAGACATTCCAGAGCAGAATGTGTGCCTGACGAAGCCGGACCTGTCG CCGCCGGAGCGTGTCCAGGAAGCCGTCAGCTGCCTCCCTGCGAGCCTCGAATCGACCCTC GCCGGCTCGCCGCCGTCGAGCCCGAAACGCTGGACGATCAGGGATTTCAACAGGGCGTAC AGCTCAGGGGAGGTCACTCCTGTTCAGGTTGCAAAGAGGTTCTTGGCTGCAGTGAAGGAG TGCTCAGGCCCAGGCCTCAACATGGCCTTCTTCATCAGCTACAGCCCTGAAGACATCATC AGGCAGGCTGAAGAATCCACCCTGAGATACCAGAGAGGGACACCTCTGTCTGCCATGGAC GGGATACTGGTCGCTGTCAAGGACGAGATCGACTGTTTGCCCTACCCAACCACAGGCGGG ACGCGGTGGCTGGGGCGGGCGCGGGCGTGCGCGGCGGACGCGGCGGTGGTGGCGCAGCTG CGCGCGTGCGGCGCGGTGCTCGCCGGCAAGACCAACATGCACGAGCTCGGCGCGGGGACC AGCGGCATCAACCCGCACCACGGCTCCACCAGGAACCCCCACAACCCCGGCCGCGTCTCC GGCGGCTCGTCCAGCGGCTCCGCCGCCGCCGTCTGCGCCGGCCTCTGCCCCGTCGCCCTC GGCGTCGACGGCGGAGGGTCCGTGCGAATGCCGGCGGCGCTGTGCGGCGTGGTCGGGTTC AAGCCGACGGCGGGGCGGCTGTCGAACGCCGGAGTTCTGCCGCTGAACTGGACGGTCGGG ATGCCCGGGATCCTCGCTGGGACGGTCGAGGACGCCGCCGTCGCATACTCAGCAATTGTT GATCAGTCTCAGCCATCCTACTTGCGGCCTGAGTTGAATCTGCCCTTGCTGAAGTCTTCA CTCTCCATCAAGAACATCAAGCTTGCAAAATATGCAAAGTGGTTCAATGACAGTTCAGAG GACATCAGAAGCTGCTGCGACAAATCTCTTCAGATGCTGCATGCGCACTATGGTTGGGAG ACTCTGGATGTAACCATACCGGAGATCGAAGAGATGCGCCTTGCGCACTATGTGACAATT GGTTCAGAATGCACTGCATCACTTGCTAAATATCTTGACAAGCTGAAGAGATCTGAAATC GGTTGGGATGTAAGGGTCGCACTTGGCGTGTATGGTTCCTTCAGCAGTAGAGCCTACCTG AATTCGCAACGGCTCCGGAATCGTCAGATGTACTTCCACAAGGAGATATTCAAGACGGCA GACGTGATCGTCTCACCAATGACCGGTGTGACTGCCTACAAGCTGCAAGACGACGCGCTA AAAAGCGGAGAACTGGACTACATAAATGGAGCCGCGTTGGTCCGGTACTCAATTGCAGGA AACTTCCTTGGTTTGCCGGCCATCACCGTCATGGTTGGGTATGACAAAGCCGGGCTGCCC ATCGGCCTCCAGTTCATCGGCAGGCCGTGGTCCGAGGCGACTCTGCTCCACATAGCATTT GCAATGCAGGCAAGCGTGCAAGAAGCACTACAAGAAGCCTGA

Peptide Sequence

PEP ID	Os12t0169000-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:3503313:3509337:-1 gene:Os12g0169000 transcript:Os12t0169000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Amidase family protein, expressed. (Os12t0169000-00)
Sequence	MAAKVYKPAAEVNLGPDSDEFYISPNVKAPRVAGLLVKIFVWILEMPIIGSMVLYILKKD NLINKLVQDAEIPEPPLFTSTHSWEDIPEQNVCLTKPDLSPPERVQEAVSCLPASLESTL AGSPPSSPKRWTIRDFNRAYSSGEVTPVQVAKRFLAAVKECSGPGLNMAFFISYSPEDII RQAEESTLRYQRGTPLSAMDGILVAVKDEIDCLPYPTTGGTRWLGRARACAADAAVVAQL RACGAVLAGKTNMHELGAGTSGINPHHGSTRNPHNPGRVSGGSSSGSAAAVCAGLCPVAL GVDGGGSVRMPAALCGVVGFKPTAGRLSNAGVLPLNWTVGMPGILAGTVEDAAVAYSAIV DQSQPSYLRPELNLPLLKSSLSIKNIKLAKYAKWFNDSSEDIRSCCDKSLQMLHAHYGWE TLDVTIPEIEEMRLAHYVTIGSECTASLAKYLDKLKRSEIGWDVRVALGVYGSFSSRAYL NSQRLRNRQMYFHKEIFKTADVIVSPMTGVTAYKLQDDALKSGELDYINGAALVRYSIAG NFLGLPAITVMVGYDKAGLPIGLQFIGRPWSEATLLHIAFAMQASVQEALQEA

Transcript Sequence

Transcript ID	Os12t0169000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3503313:3509337:-1 gene:Os12g0169000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Amidase family protein, expressed. (Os12t0169000-00)
Sequence	TTTTCTCCTCGTTTTTGCCGTTCATCTTGGGTCTTGTCGTCGTATAAAAGGCACCAATTC TTGTCAGTAATCAGACAGGAAGGGAGGAGCTTAGCAGCAGTCGTTGTGCAGAGGAGAGTC TCCTTTGCTTCCCAAGTTGCCATCCATGGCCGCCAAGGTGTACAAGCCGGCCGCCGAGGT CAATCTCGGCCCGGACAGCGACGAGTTCTACATCAGCCCTAACGTCAAAGCTCCTCGGGT AGCAGGGCTGCTGGTGAAGATCTTCGTGTGGATTCTTGAGATGCCGATCATCGGCTCAAT GGTGCTTTACATCCTCAAGAAGGATAATCTCATCAACAAGCTTGTCCAAGATGCTGAAAT CCCAGAGCCTCCACTGTTCACTTCCACACACAGCTGGGAAGACATTCCAGAGCAGAATGT GTGCCTGACGAAGCCGGACCTGTCGCCGCCGGAGCGTGTCCAGGAAGCCGTCAGCTGCCT CCCTGCGAGCCTCGAATCGACCCTCGCCGGCTCGCCGCCGTCGAGCCCGAAACGCTGGAC GATCAGGGATTTCAACAGGGCGTACAGCTCAGGGGAGGTCACTCCTGTTCAGGTTGCAAA GAGGTTCTTGGCTGCAGTGAAGGAGTGCTCAGGCCCAGGCCTCAACATGGCCTTCTTCAT CAGCTACAGCCCTGAAGACATCATCAGGCAGGCTGAAGAATCCACCCTGAGATACCAGAG AGGGACACCTCTGTCTGCCATGGACGGGATACTGGTCGCTGTCAAGGACGAGATCGACTG TTTGCCCTACCCAACCACAGGCGGGACGCGGTGGCTGGGGCGGGCGCGGGCGTGCGCGGC GGACGCGGCGGTGGTGGCGCAGCTGCGCGCGTGCGGCGCGGTGCTCGCCGGCAAGACCAA CATGCACGAGCTCGGCGCGGGGACCAGCGGCATCAACCCGCACCACGGCTCCACCAGGAA CCCCCACAACCCCGGCCGCGTCTCCGGCGGCTCGTCCAGCGGCTCCGCCGCCGCCGTCTG CGCCGGCCTCTGCCCCGTCGCCCTCGGCGTCGACGGCGGAGGGTCCGTGCGAATGCCGGC GGCGCTGTGCGGCGTGGTCGGGTTCAAGCCGACGGCGGGGCGGCTGTCGAACGCCGGAGT TCTGCCGCTGAACTGGACGGTCGGGATGCCCGGGATCCTCGCTGGGACGGTCGAGGACGC CGCCGTCGCATACTCAGCAATTGTTGATCAGTCTCAGCCATCCTACTTGCGGCCTGAGTT GAATCTGCCCTTGCTGAAGTCTTCACTCTCCATCAAGAACATCAAGCTTGCAAAATATGC AAAGTGGTTCAATGACAGTTCAGAGGACATCAGAAGCTGCTGCGACAAATCTCTTCAGAT GCTGCATGCGCACTATGGTTGGGAGACTCTGGATGTAACCATACCGGAGATCGAAGAGAT GCGCCTTGCGCACTATGTGACAATTGGTTCAGAATGCACTGCATCACTTGCTAAATATCT TGACAAGCTGAAGAGATCTGAAATCGGTTGGGATGTAAGGGTCGCACTTGGCGTGTATGG TTCCTTCAGCAGTAGAGCCTACCTGAATTCGCAACGGCTCCGGAATCGTCAGATGTACTT CCACAAGGAGATATTCAAGACGGCAGACGTGATCGTCTCACCAATGACCGGTGTGACTGC CTACAAGCTGCAAGACGACGCGCTAAAAAGCGGAGAACTGGACTACATAAATGGAGCCGC GTTGGTCCGGTACTCAATTGCAGGAAACTTCCTTGGTTTGCCGGCCATCACCGTCATGGT TGGGTATGACAAAGCCGGGCTGCCCATCGGCCTCCAGTTCATCGGCAGGCCGTGGTCCGA GGCGACTCTGCTCCACATAGCATTTGCAATGCAGGCAAGCGTGCAAGAAGCACTACAAGA AGCCTGAAGTGTTCTACGATCTCCTCAAGAAAGATTAAATCCGTAGGCTGTATGTATGTC AGAATTCAGAAAATTCAGATCATTGCTTCGATCAAGTCTCCAACATTGAAGAGAATCCAT TTTAAGTTAGCACGGAAG