Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0165900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3338061:3344342:1 gene:Os12g0165900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Nucleoporin Autopeptidase 2, NUCLEOPORIN AUTOPEPTIDASE 2 description:Hypothetical conserved gene. (Os12t0165900-01)
Sequence	ATGTTCGGCTCGAGCAACCCATTTGGGCAGTCGTCGACTAGCCCTTTTGGGCAGACCTCA AGCAACCCATTCGGGGCACAGACAGGCGGATTTGGCCAGGCGAACACTACCACCACCAAT CCTTTTGCGCCGAAACCCTTTGGCAGCCCGATCACCGCATTCGGGGCACAGACAGGAAAT TCACCTTTTGGCACGACGTCCACCGGAGCCTTTGGCCAGCCATCTGCTCCGACGTTTGGC TCGACGTCTACCGGAGCCTTTGGCCAGCCATCCGCTCCGGCGTTTGGCTCAATGTCCACC GGAGCCTTTGGCCAGCCATCCGCTCCGGCGTTTGGCTCAACGTCCACCGGAGCCTTTGGC CAGCCATCCACTCAGGCGTTTGGCACTCCGTCATCCTCTCCATTTGGGAGCTCTACACCA GCTTTTGGTGCATCACCAGCCCCAGTGTTTGGTGCCACATCGTCTACCTTTGGCAGCGGA TCATCATTGTTTGGACAAAAGCCAAGCTTTGGCGGTTTTGGTTCTTCTCCTAGCCAGTCT AGTGCTTTTGGAGGTCCATTCCAGCAAGCACAACCAGCATTTGGTGGCAGCACTTTTGGC GCGGCAAGCACGCCGACCTTTGGCACCACAACTACACCATCCTTTGGTGCCACAACTACA CCAGCATTCGGCACGACCACCCCAGCATTTGGTTCAACATCTACATCTGTATTCGGTGCT TCAAGTGCCCCAGCATTTGGTTCTACAGGCTTTGGTTCATCCACCACTCCTGGTTTTGGA TCTTCAGGTACTACAGCCTTTGGTGCAGGTAGTACTCCAGGATTCGGAGCTTCAAGCTCT GGCATGTCAACTAGTGCTTTTAACTTTGGCTCTTCTCCATCTTTTGGTCAAACAATACCT ACATTCGGTAGCACTCCCTTTGGAACAACTTCATCTACTTTTGGCTCACAGACATCTACA TTTGGATCACAGACAACAGCACCAGCATTTGGGCAAACATCATTTGGGAATCAAGCTGGA GGAACCAGAATACAGCCTTATACTCAAACACCAGATGCGGACAGTGCTACAAGTGGTACT CAGCCTGCTGCAAAATTGAACTCAATATCAGCCATGGAGGCATACAAAGCGAAGAGTCAT GAAGAGCTGAGGTGGCAAGATTACCAGCGTGGAGACAAAGGTGGACCAAATCCTTCAGGA ACTCCAGCAGTGACCCCTAGCTTCCCATCTCCAGTCAACAACCAATTTTCCCCAAACCCT CCAAATGCATTTCCATCAGCATCTGCGAACAATCCATTTGCTCCCAAGCAGCCTTCAACT GGTTTTGGTTCTATTTCATCCGTGTTCAATTCAATATCCAGTAATACAGCACCAGCAAGC TCAAGCCCATTTGCACCAACTATAAGTAACCCATTTCCTACACAAACAAACTGTTCTCAG TTTGTAAATTCCGCTTCTAGTCCTTCTCTATTTGGCACAATAAACCAAAACTCATTCAGT ACGTCTGGGACTAACAGTCAATCAGTTGGGCTATTTGGTCCTTCCCCATCAATTGTGCAA CAGCCCAGCCAGGCATCATCAGGGTTCACATCGAGCTTCCCATCTTTTTCTGGGAGCCTA TTCAGCCCACCTACTCCTGTGGCGACTGGTGGATTGTTTGGCAGCGGGCCTTCACCCTCA ACGCCGACATTGCAACAACCTGTCCCTGCTCAAATGCCCAGCATTTTGTTCCAACCTCCA GCTCAAACAGCTTCTACTGGTGGATTTCCTGGCGTTTCCAATACAAATCAGGCACCTTTT GGACAGCCAACCCCTAGCCAGTCCAATATGGTCATGCAACCAGCTCTTGTTAAAAATCCA TTCGGGATGCTGCCAGCGACTCCTCAGATGTCCATTGGGAATGGTGGATCAGCCCCTTCT GTTCAATATGGAATCTCAAGTTTGCCGGTTGCTGAGAAGCCTCATACGAGCAGGGCGTCA TTATCCATGGTGGTTCCTAGGCATTTGTCACAGAGAAGGATAAAATTGCTGCCAAGAAAA TATAATCCGATATCTGATGGCAAGGTTCCATTCTTTGCTGATGATGAAGAATCTCCTGCA ACACCAAAAGCTGATGCTTTTTTCATCCCTAGAGAGAACCCAAGAAATCTGGTAATCCGA CCAATTGATCAGTGGCCTTCACGTGGCACAATGGACAGGCAACAAATTCCAAAGAATTCA GCTGATATTGATGAACATGAAGGCTCTTTGGCTGAGAGGGAGTTCAACAAGACTGCCATT TCACCAACCAGGTCTACTTCAATCGAAAATGGCATCCACCGTGATGACCGTGCATCAAAT GAGCCTGATACTGTGACAAGGCATGGGAATGGTACTTCTGTTGAGAGGCTTGCGCCTAAG CTAGTGCATGCCGATTATTACACAGAGCCTAGTCTGGAGGAGCTTGCTGCCAAAGAACGT GCTGAACCAGGCTACTGCAGTCGTGTGAGGGATTTTGCTGTGGGACGTCATGATTACGGT AGCATCAAGTTTATTGGAGAAACCAACGTGAGGGGCCTTGATCTGGAGTCCATTGTGGAA TTCAATAACCGTGAAGTGATCGTGTACAAGGACGATAGCAAGAAGCCCCCTGTTGGTGAG GGTCTGAATAAAGCTGCCGTGGTGACCCTTCTCAATATCAAGTGCATGAACAAGAAGACG GGGGAGCAGTACACAGAGGGTCCGAGGGTGGGCAAGTACAAGGAGATACTGGTGAAGAAG GCTGAGGAGCAGGGTGCTGAGTTCATCTCATTCGATGCTGCCAAGGGCGAGTGGAAATTC AGGGTCAAGCATTTCAGCTCCTATGGCTTTGGTGAAGCTGAGATCGACTCTTGCTAG

Peptide Sequence

PEP ID	Os12t0165900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3338061:3344342:1 gene:Os12g0165900 transcript:Os12t0165900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Nucleoporin Autopeptidase 2, NUCLEOPORIN AUTOPEPTIDASE 2 description:Hypothetical conserved gene. (Os12t0165900-01)
Sequence	MFGSSNPFGQSSTSPFGQTSSNPFGAQTGGFGQANTTTTNPFAPKPFGSPITAFGAQTGN SPFGTTSTGAFGQPSAPTFGSTSTGAFGQPSAPAFGSMSTGAFGQPSAPAFGSTSTGAFG QPSTQAFGTPSSSPFGSSTPAFGASPAPVFGATSSTFGSGSSLFGQKPSFGGFGSSPSQS SAFGGPFQQAQPAFGGSTFGAASTPTFGTTTTPSFGATTTPAFGTTTPAFGSTSTSVFGA SSAPAFGSTGFGSSTTPGFGSSGTTAFGAGSTPGFGASSSGMSTSAFNFGSSPSFGQTIP TFGSTPFGTTSSTFGSQTSTFGSQTTAPAFGQTSFGNQAGGTRIQPYTQTPDADSATSGT QPAAKLNSISAMEAYKAKSHEELRWQDYQRGDKGGPNPSGTPAVTPSFPSPVNNQFSPNP PNAFPSASANNPFAPKQPSTGFGSISSVFNSISSNTAPASSSPFAPTISNPFPTQTNCSQ FVNSASSPSLFGTINQNSFSTSGTNSQSVGLFGPSPSIVQQPSQASSGFTSSFPSFSGSL FSPPTPVATGGLFGSGPSPSTPTLQQPVPAQMPSILFQPPAQTASTGGFPGVSNTNQAPF GQPTPSQSNMVMQPALVKNPFGMLPATPQMSIGNGGSAPSVQYGISSLPVAEKPHTSRAS LSMVVPRHLSQRRIKLLPRKYNPISDGKVPFFADDEESPATPKADAFFIPRENPRNLVIR PIDQWPSRGTMDRQQIPKNSADIDEHEGSLAEREFNKTAISPTRSTSIENGIHRDDRASN EPDTVTRHGNGTSVERLAPKLVHADYYTEPSLEELAAKERAEPGYCSRVRDFAVGRHDYG SIKFIGETNVRGLDLESIVEFNNREVIVYKDDSKKPPVGEGLNKAAVVTLLNIKCMNKKT GEQYTEGPRVGKYKEILVKKAEEQGAEFISFDAAKGEWKFRVKHFSSYGFGEAEIDSC

Transcript Sequence

Transcript ID	Os12t0165900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3338061:3344342:1 gene:Os12g0165900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Nucleoporin Autopeptidase 2, NUCLEOPORIN AUTOPEPTIDASE 2 description:Hypothetical conserved gene. (Os12t0165900-01)
Sequence	GCTTCCCTCCGCCTCCTCTCGCCGGTTTCCTTCCCATCCCCGCCGAGTCGCCGTCGCCAC CGCCGCCGAATCCCCCGCTCCCCGCCGCGGGAAGTCGCCGCCGACCTCCCACCGCACGCC GCGCGGTCCTCTTCAGATCCTAATCGCCGGCATTGAGCCACCCTACCCGCCGGCGATTCC GCCGACGCAGAGGAGGGGAGGGGGAGGAGGAGCAGGAGGAGGAGGAGGAGGACTAAGAAG TCGCCGCCGCAGCAGCCGCAGCCGCGGCCCTCATTGCCAAGGAAGCAGCCATGTTCGGCT CGAGCAACCCATTTGGGCAGTCGTCGACTAGCCCTTTTGGGCAGACCTCAAGCAACCCAT TCGGGGCACAGACAGGCGGATTTGGCCAGGCGAACACTACCACCACCAATCCTTTTGCGC CGAAACCCTTTGGCAGCCCGATCACCGCATTCGGGGCACAGACAGGAAATTCACCTTTTG GCACGACGTCCACCGGAGCCTTTGGCCAGCCATCTGCTCCGACGTTTGGCTCGACGTCTA CCGGAGCCTTTGGCCAGCCATCCGCTCCGGCGTTTGGCTCAATGTCCACCGGAGCCTTTG GCCAGCCATCCGCTCCGGCGTTTGGCTCAACGTCCACCGGAGCCTTTGGCCAGCCATCCA CTCAGGCGTTTGGCACTCCGTCATCCTCTCCATTTGGGAGCTCTACACCAGCTTTTGGTG CATCACCAGCCCCAGTGTTTGGTGCCACATCGTCTACCTTTGGCAGCGGATCATCATTGT TTGGACAAAAGCCAAGCTTTGGCGGTTTTGGTTCTTCTCCTAGCCAGTCTAGTGCTTTTG GAGGTCCATTCCAGCAAGCACAACCAGCATTTGGTGGCAGCACTTTTGGCGCGGCAAGCA CGCCGACCTTTGGCACCACAACTACACCATCCTTTGGTGCCACAACTACACCAGCATTCG GCACGACCACCCCAGCATTTGGTTCAACATCTACATCTGTATTCGGTGCTTCAAGTGCCC CAGCATTTGGTTCTACAGGCTTTGGTTCATCCACCACTCCTGGTTTTGGATCTTCAGGTA CTACAGCCTTTGGTGCAGGTAGTACTCCAGGATTCGGAGCTTCAAGCTCTGGCATGTCAA CTAGTGCTTTTAACTTTGGCTCTTCTCCATCTTTTGGTCAAACAATACCTACATTCGGTA GCACTCCCTTTGGAACAACTTCATCTACTTTTGGCTCACAGACATCTACATTTGGATCAC AGACAACAGCACCAGCATTTGGGCAAACATCATTTGGGAATCAAGCTGGAGGAACCAGAA TACAGCCTTATACTCAAACACCAGATGCGGACAGTGCTACAAGTGGTACTCAGCCTGCTG CAAAATTGAACTCAATATCAGCCATGGAGGCATACAAAGCGAAGAGTCATGAAGAGCTGA GGTGGCAAGATTACCAGCGTGGAGACAAAGGTGGACCAAATCCTTCAGGAACTCCAGCAG TGACCCCTAGCTTCCCATCTCCAGTCAACAACCAATTTTCCCCAAACCCTCCAAATGCAT TTCCATCAGCATCTGCGAACAATCCATTTGCTCCCAAGCAGCCTTCAACTGGTTTTGGTT CTATTTCATCCGTGTTCAATTCAATATCCAGTAATACAGCACCAGCAAGCTCAAGCCCAT TTGCACCAACTATAAGTAACCCATTTCCTACACAAACAAACTGTTCTCAGTTTGTAAATT CCGCTTCTAGTCCTTCTCTATTTGGCACAATAAACCAAAACTCATTCAGTACGTCTGGGA CTAACAGTCAATCAGTTGGGCTATTTGGTCCTTCCCCATCAATTGTGCAACAGCCCAGCC AGGCATCATCAGGGTTCACATCGAGCTTCCCATCTTTTTCTGGGAGCCTATTCAGCCCAC CTACTCCTGTGGCGACTGGTGGATTGTTTGGCAGCGGGCCTTCACCCTCAACGCCGACAT TGCAACAACCTGTCCCTGCTCAAATGCCCAGCATTTTGTTCCAACCTCCAGCTCAAACAG CTTCTACTGGTGGATTTCCTGGCGTTTCCAATACAAATCAGGCACCTTTTGGACAGCCAA CCCCTAGCCAGTCCAATATGGTCATGCAACCAGCTCTTGTTAAAAATCCATTCGGGATGC TGCCAGCGACTCCTCAGATGTCCATTGGGAATGGTGGATCAGCCCCTTCTGTTCAATATG GAATCTCAAGTTTGCCGGTTGCTGAGAAGCCTCATACGAGCAGGGCGTCATTATCCATGG TGGTTCCTAGGCATTTGTCACAGAGAAGGATAAAATTGCTGCCAAGAAAATATAATCCGA TATCTGATGGCAAGGTTCCATTCTTTGCTGATGATGAAGAATCTCCTGCAACACCAAAAG CTGATGCTTTTTTCATCCCTAGAGAGAACCCAAGAAATCTGGTAATCCGACCAATTGATC AGTGGCCTTCACGTGGCACAATGGACAGGCAACAAATTCCAAAGAATTCAGCTGATATTG ATGAACATGAAGGCTCTTTGGCTGAGAGGGAGTTCAACAAGACTGCCATTTCACCAACCA GGTCTACTTCAATCGAAAATGGCATCCACCGTGATGACCGTGCATCAAATGAGCCTGATA CTGTGACAAGGCATGGGAATGGTACTTCTGTTGAGAGGCTTGCGCCTAAGCTAGTGCATG CCGATTATTACACAGAGCCTAGTCTGGAGGAGCTTGCTGCCAAAGAACGTGCTGAACCAG GCTACTGCAGTCGTGTGAGGGATTTTGCTGTGGGACGTCATGATTACGGTAGCATCAAGT TTATTGGAGAAACCAACGTGAGGGGCCTTGATCTGGAGTCCATTGTGGAATTCAATAACC GTGAAGTGATCGTGTACAAGGACGATAGCAAGAAGCCCCCTGTTGGTGAGGGTCTGAATA AAGCTGCCGTGGTGACCCTTCTCAATATCAAGTGCATGAACAAGAAGACGGGGGAGCAGT ACACAGAGGGTCCGAGGGTGGGCAAGTACAAGGAGATACTGGTGAAGAAGGCTGAGGAGC AGGGTGCTGAGTTCATCTCATTCGATGCTGCCAAGGGCGAGTGGAAATTCAGGGTCAAGC ATTTCAGCTCCTATGGCTTTGGTGAAGCTGAGATCGACTCTTGCTAGTGTTCTTTTTCTT CTTTTTTTTTTGTTTTTTTGTGTTTCCTATCTGTAACTGGTTCTGTAGAGGAGGATGCTG AACTGAATTGGTGATTATATAGTGTAGTAAATAGTGCCTCCTTGTTACATGTTTTTGCTC TAATCTTTTGGGGTAGCTGTTTTCATCCTGCCATGAGTATCATCTCTATTTCTGATTCAT GGTGTCTGAAAATTGTGCAAGTCTTAGTTAATGGTAGAAACAGATCCATACGTGCGTTTT TTAAACAATGATTACATTCCAATGAACAAGTGAAATATCTTTTAGT