Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0165700-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3325748:3328790:-1 gene:Os12g0165700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transcription Elongation Factor II-S-like gene, Mediator 26_3 description:Transcription elongation factor, TFIIS/CRSP70, N-terminal domain containing protein. (Os12t0165700-01)
Sequence	ATGGACACCGACGGGCGCCTCCGCCGCGCGCTGGCGGCGTTCGGGGGCGGGGCCGACGTG TGGGACCTCGTCGATGCCGCCCTCGCCTCGGCGGCGCGCGACCGCCCCGCAGAGCTCCGC GCGCGCCGCGACGGCATCGTGGAGCGCCTCTACGCCACCGCCGCCGGCGGCCGCTGCGGG AACTGCGACGCGCCGAGATCGGCCGAGCCCGAGGCGGCGGCGGCGGCGGCGGCTTCCCCG GCTTCGCCCGATGAGGATGCCGACGTGGACGGCCTCGACGACGACGAGGGCGGCGGCATG GAGAGCAAGATCCTGGCGATCAGGGACTTCTTGGAGGACCCCGACCAGTCGGAGGACGAG CTGGTCAGCTTGCTGCAGAGCCTCGCAGACATGGACATCACCTACAAGGCTCTCCAGGAG ACGGACATCGGCCGCCATGTCAACGGCCTGCGCAAGCACCCGTCCGGCGAGGTCCGGCAG CTTGTGAAGCTGCTCGTCAGGAAATGGAAGGAGATAGTGGATGACTGGGTGCGGCTGCAC AACTCCGGTGGCGACGGCGGTAGCTCGGTTCTAACTGATGGTGACTCTCCTGATAAAATC CAAGGCAGGAGCTACCAAAATGCTCAGGTTTCAGACTTCAAGTATTCTCCCAGCCCACAG AGACATAATGGTTTGAGTTCAGAGAGATCTAGCAATAATAATGGCGTCGAATCAATGATT GAGAAGCGCAGAACAAGCCCAGCACCTACATATCATAACAACAAACAGAACAACAGCATC GGCTATTCTACTACTTCCTCCTCTGCTCCAGTTAGGACTGTAAGGGAGCAGAAAGATAAT CTTATGGATCTTGAGAAGCTTGATTCTGCCAGAAAGAGACTCCAGGAAAACTACCAGGAA GCACAAAATGCAAAAAAGCAGAGGACAATTCAAGTGATGGATATCCACGACATACCAAAG CCGAAAAATAGAAACGCCTTCATCCGCAAGGGCGGAGGCGGCCTCCCTGGAAAGCACCGG TGA

Peptide Sequence

PEP ID	Os12t0165700-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3325748:3328790:-1 gene:Os12g0165700 transcript:Os12t0165700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transcription Elongation Factor II-S-like gene, Mediator 26_3 description:Transcription elongation factor, TFIIS/CRSP70, N-terminal domain containing protein. (Os12t0165700-01)
Sequence	MDTDGRLRRALAAFGGGADVWDLVDAALASAARDRPAELRARRDGIVERLYATAAGGRCG NCDAPRSAEPEAAAAAAASPASPDEDADVDGLDDDEGGGMESKILAIRDFLEDPDQSEDE LVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDDWVRLH NSGGDGGSSVLTDGDSPDKIQGRSYQNAQVSDFKYSPSPQRHNGLSSERSSNNNGVESMI EKRRTSPAPTYHNNKQNNSIGYSTTSSSAPVRTVREQKDNLMDLEKLDSARKRLQENYQE AQNAKKQRTIQVMDIHDIPKPKNRNAFIRKGGGGLPGKHR

Transcript Sequence

Transcript ID	Os12t0165700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3325748:3328790:-1 gene:Os12g0165700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transcription Elongation Factor II-S-like gene, Mediator 26_3 description:Transcription elongation factor, TFIIS/CRSP70, N-terminal domain containing protein. (Os12t0165700-01)
Sequence	GCTTCGCTTGCGCCAATCCAAATCGCCGCCTCGCACCAATCCATCCCCGGCATGGCCGCG CCCCAACCGGAGGTGGTGGGGCTGACGACGACGACGAGGGCGACGGCGGCGTAGCGCGGT CGGTCGCTGTCGCTGCGGCGGAATTCCGGAGGAGGGGGGGCTCTGCCTTATCGGATCGTG GGGGGTAAGACCCGGTTCCGGCGATCGCCGGGATGGACACCGACGGGCGCCTCCGCCGCG CGCTGGCGGCGTTCGGGGGCGGGGCCGACGTGTGGGACCTCGTCGATGCCGCCCTCGCCT CGGCGGCGCGCGACCGCCCCGCAGAGCTCCGCGCGCGCCGCGACGGCATCGTGGAGCGCC TCTACGCCACCGCCGCCGGCGGCCGCTGCGGGAACTGCGACGCGCCGAGATCGGCCGAGC CCGAGGCGGCGGCGGCGGCGGCGGCTTCCCCGGCTTCGCCCGATGAGGATGCCGACGTGG ACGGCCTCGACGACGACGAGGGCGGCGGCATGGAGAGCAAGATCCTGGCGATCAGGGACT TCTTGGAGGACCCCGACCAGTCGGAGGACGAGCTGGTCAGCTTGCTGCAGAGCCTCGCAG ACATGGACATCACCTACAAGGCTCTCCAGGAGACGGACATCGGCCGCCATGTCAACGGCC TGCGCAAGCACCCGTCCGGCGAGGTCCGGCAGCTTGTGAAGCTGCTCGTCAGGAAATGGA AGGAGATAGTGGATGACTGGGTGCGGCTGCACAACTCCGGTGGCGACGGCGGTAGCTCGG TTCTAACTGATGGTGACTCTCCTGATAAAATCCAAGGCAGGAGCTACCAAAATGCTCAGG TTTCAGACTTCAAGTATTCTCCCAGCCCACAGAGACATAATGGTTTGAGTTCAGAGAGAT CTAGCAATAATAATGGCGTCGAATCAATGATTGAGAAGCGCAGAACAAGCCCAGCACCTA CATATCATAACAACAAACAGAACAACAGCATCGGCTATTCTACTACTTCCTCCTCTGCTC CAGTTAGGACTGTAAGGGAGCAGAAAGATAATCTTATGGATCTTGAGAAGCTTGATTCTG CCAGAAAGAGACTCCAGGAAAACTACCAGGAAGCACAAAATGCAAAAAAGCAGAGGACAA TTCAAGTGATGGATATCCACGACATACCAAAGCCGAAAAATAGAAACGCCTTCATCCGCA AGGGCGGAGGCGGCCTCCCTGGAAAGCACCGGTGATTATCCTGCAGACCTACAATTGTAA TTTCAAAAAGGCCGAAACGAGAATAAAAGAAGAAGAATGAAGGCTTGATATTTGTTTTCT GGGTATTGTACTATCGTTTTTACATTGCCTATTTGGTACCCTAACGTAGCCTCACATCTT CCAGTTCACTGTAATATTGTCCAGTTAGTACATGAGGCTATGCGTCTGGGTTCCCTTACC AAGAAGAGGAGAGCAAAGTTTATAGACTTACAGTGCTCGTTTCTATTGTAATTTCTTCTT CATTTTGAATGTAGCTTGTTTACAATGTTGCTGCCGTTTTTCGATTAATAGGTAGGTATT GTATGTACTCATCAATTTGACTGTATATTTGTTCGTTACAAATTAAAGTGATATTAATAT ATAACACAATGGTATCACATGG