Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0165000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3305271:3316472:-1 gene:Os12g0165000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-194 description:WD40 repeat-like domain containing protein. (Os12t0165000-01);Similar to predicted protein. (Os12t0165000-02)
Sequence	ATGCATCGTGTTGGAAGTGCTGGTAACACGGCAGGTTCAAGTCGACCGAGAAAGGAGAAG CGCTTTACATATGTGCTGAATGACGCTGATAACAAAAAGCATTGTGCTGGGATCAACTGC TTGTCATACCTAAATGCCTCTACTTCTGGTACGAGTGATTATCTTTTTACCGGGAGTCGG GATGGTACCTTGAAGAGGTGGGAACCAAAAAATGGAGTCGCAAGCTTCTCAGCAACTTTT GAGTCACATGTTGATTGGGTTAATGATGCCATTATTGTTGGCCAAAATCTTGTTTCCTGT TCCTCAGATACCACTCTAAAGGTGTGGAATTGTTTATCAGATGGTGCTTGTACCAGGACT CTCCGCCAGCATTCCGATTATGTGATTTGTCTTGCTGCATCTGAAAAAAATAGCAATATT GTTGCCTCTGGTGGCCTTGGCGGTGAGGTCTTTATATGGGACCTTGATTCTTCTCTTGCT CCTGTGGCCAAATCTGTAGATGCAAAAGAGGATGAAGCTCCTAATGGAAACTCTGGGCCT GCTTTGACAACCTTGTGCAATGTAAATTCTAGCAGCAACCTTGCTTCCACCAATGGGCAA TCACATGGGTACAGTCCAATCACTGCCAAAGGTCACAAAGATTCAGTTTATGCATTGGCC ATGAGTGACACAGGAAACACACTTGTCTCTGGTGGTACTGAAAAGGTTGTTCGCGTTTGG GATCCCAGGACTGGTTCAAAGAAAATGAAATTGAGAGGGCACACTGACAATATCAGGGCT TTACTTCTTGATCCTACTGGCAGGTATTGTCTTTCAGGCTCATCTGATTCAATGATAAGA TTATGGGATCTGGGACAGCAGCGATGTATTCATTCTTATGCTGTGCATACTGATTCAGTC TGGGCGCTTGCAAGCACTCCTTCGTTTAGTCATGTTTATAGTGGTGGAAGAGATCAGTCG GTGTACTTGACAGATTTAAGCAATCGAGAGAGTGTCTTGCTCTGCACAAACGAGCACCCG ATTCTACAATTGTCCTTGCAGGATGATATGATTTGGGTTGCAACAACTGATTCTTCTGTG AATGGATGGAAAGCTGAAGCGCATGAACCCCTAAAGCTTTTCCAAAAAGGTTCTTCATTC TTAGCTGGCAATTTGTCATTCTCCAGGGCAAGGGCTTCTTTAGAAGGATCAGCACCTGTC CCTATACACAAAGAACCATCTTCAATTATTCCTGGAGTTCCAGCAATAACTCAGCATGAG ATCCTGAATAATAGAAGACATGTATTGACGAAGGATACTGCTGGTTCTGTCAAATTGTGG GAGATTACTCGAGGAGCTGTTATTGAAGACTTTGGCAAGGTTTCTTTTGAGGATAAGAAA AAAGAGTTGTTTGAGATGGTTAGCATACCTGCCTGGTTTACCATGGATGCTCGATTGGGA TGCCTGTCTGTCCACCTGGATACACCTCAATGCTTTTCTGCAGAAATATATGCAGTTGAC TTAAACGTTGCAGGAGCACAGGAAGATCTTAAGATTAATTTGGCTCAGGAGACTCTCCGT GGTTTGTTAGTTCATTGGAGTAAAAAAAAGCAGAGATCTGGCTCACACGGCTTGTCAAAT GGTGACACTTCAACAGGAAAAGATGTATCCTTGAAAAATTTGCCCCATCCAAGATCTGAG GTTGATGATGGGGCTGAAAATCATGCAAGTCAGATGCTTCCCTCATTTGAGTTTTCCACA GTTTCGCCTCCATCAATCATCACAGAAGGTTCAAGTGGAGGGCCTTGGAGAAAGAGAATT ACAGATTTAGATGGAACCGAGAGCGATATCCCATGGTGGATTGTGGACTGTGTTGAGCAT AATCGATTTCCAAAAGAGAATACAAAGTGTGGATTCTACTTGCATCCTGCTGAAGGGTCA CCTGCACCGAACATAACACAAGGGAAACTTAGTGCTCCACGGATATTGCGGATTCACAAA GTAGCTAACTATGTGGTCGAGAAACTTGATAGACCACTGGATGGCAATGCTGACAGCACA TTTGGAATGGGATTGACTTCTGGCCAATCACAATTTTCAGCGCTAGATAGTTCTTCACGG CTTGGACTAAAACCATGGCAAAAATTGAAACCTTCTGTAGAGATATTGTGTAACAGCCAG GTTTTGGCACCCGAAATGAGCTTGGCCACAGTGCGGGCTTATGTCTGGAAGAAGCCAGAG GATTTGATTCTTAACTACAAAGTGGTCCAGTCAAGATGA

Peptide Sequence

PEP ID	Os12t0165000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3305271:3316472:-1 gene:Os12g0165000 transcript:Os12t0165000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-194 description:WD40 repeat-like domain containing protein. (Os12t0165000-01);Similar to predicted protein. (Os12t0165000-02)
Sequence	MHRVGSAGNTAGSSRPRKEKRFTYVLNDADNKKHCAGINCLSYLNASTSGTSDYLFTGSR DGTLKRWEPKNGVASFSATFESHVDWVNDAIIVGQNLVSCSSDTTLKVWNCLSDGACTRT LRQHSDYVICLAASEKNSNIVASGGLGGEVFIWDLDSSLAPVAKSVDAKEDEAPNGNSGP ALTTLCNVNSSSNLASTNGQSHGYSPITAKGHKDSVYALAMSDTGNTLVSGGTEKVVRVW DPRTGSKKMKLRGHTDNIRALLLDPTGRYCLSGSSDSMIRLWDLGQQRCIHSYAVHTDSV WALASTPSFSHVYSGGRDQSVYLTDLSNRESVLLCTNEHPILQLSLQDDMIWVATTDSSV NGWKAEAHEPLKLFQKGSSFLAGNLSFSRARASLEGSAPVPIHKEPSSIIPGVPAITQHE ILNNRRHVLTKDTAGSVKLWEITRGAVIEDFGKVSFEDKKKELFEMVSIPAWFTMDARLG CLSVHLDTPQCFSAEIYAVDLNVAGAQEDLKINLAQETLRGLLVHWSKKKQRSGSHGLSN GDTSTGKDVSLKNLPHPRSEVDDGAENHASQMLPSFEFSTVSPPSIITEGSSGGPWRKRI TDLDGTESDIPWWIVDCVEHNRFPKENTKCGFYLHPAEGSPAPNITQGKLSAPRILRIHK VANYVVEKLDRPLDGNADSTFGMGLTSGQSQFSALDSSSRLGLKPWQKLKPSVEILCNSQ VLAPEMSLATVRAYVWKKPEDLILNYKVVQSR

Transcript Sequence

Transcript ID	Os12t0165000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3305271:3316472:-1 gene:Os12g0165000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-194 description:WD40 repeat-like domain containing protein. (Os12t0165000-01);Similar to predicted protein. (Os12t0165000-02)
Sequence	GTCAGTTCGTCTTCCTCCCCTCAAGCCTCAACCCCTTCCCCTACCAGGCGCGGCTGCCGG CGATTGCTTGATCCCTCCGCCTCCCTGCCTCGCCGCCGCGCGCCACCTCGCCGTCGAATC GAAGGCTATAAGCTGCTCCGGTTTTAGATAAATTAGGCATCTTTCAATGCATCGTGTTGG AAGTGCTGGTAACACGGCAGGTTCAAGTCGACCGAGAAAGGAGAAGCGCTTTACATATGT GCTGAATGACGCTGATAACAAAAAGCATTGTGCTGGGATCAACTGCTTGTCATACCTAAA TGCCTCTACTTCTGGTACGAGTGATTATCTTTTTACCGGGAGTCGGGATGGTACCTTGAA GAGGTGGGAACCAAAAAATGGAGTCGCAAGCTTCTCAGCAACTTTTGAGTCACATGTTGA TTGGGTTAATGATGCCATTATTGTTGGCCAAAATCTTGTTTCCTGTTCCTCAGATACCAC TCTAAAGGTGTGGAATTGTTTATCAGATGGTGCTTGTACCAGGACTCTCCGCCAGCATTC CGATTATGTGATTTGTCTTGCTGCATCTGAAAAAAATAGCAATATTGTTGCCTCTGGTGG CCTTGGCGGTGAGGTCTTTATATGGGACCTTGATTCTTCTCTTGCTCCTGTGGCCAAATC TGTAGATGCAAAAGAGGATGAAGCTCCTAATGGAAACTCTGGGCCTGCTTTGACAACCTT GTGCAATGTAAATTCTAGCAGCAACCTTGCTTCCACCAATGGGCAATCACATGGGTACAG TCCAATCACTGCCAAAGGTCACAAAGATTCAGTTTATGCATTGGCCATGAGTGACACAGG AAACACACTTGTCTCTGGTGGTACTGAAAAGGTTGTTCGCGTTTGGGATCCCAGGACTGG TTCAAAGAAAATGAAATTGAGAGGGCACACTGACAATATCAGGGCTTTACTTCTTGATCC TACTGGCAGGTATTGTCTTTCAGGCTCATCTGATTCAATGATAAGATTATGGGATCTGGG ACAGCAGCGATGTATTCATTCTTATGCTGTGCATACTGATTCAGTCTGGGCGCTTGCAAG CACTCCTTCGTTTAGTCATGTTTATAGTGGTGGAAGAGATCAGTCGGTGTACTTGACAGA TTTAAGCAATCGAGAGAGTGTCTTGCTCTGCACAAACGAGCACCCGATTCTACAATTGTC CTTGCAGGATGATATGATTTGGGTTGCAACAACTGATTCTTCTGTGAATGGATGGAAAGC TGAAGCGCATGAACCCCTAAAGCTTTTCCAAAAAGGTTCTTCATTCTTAGCTGGCAATTT GTCATTCTCCAGGGCAAGGGCTTCTTTAGAAGGATCAGCACCTGTCCCTATACACAAAGA ACCATCTTCAATTATTCCTGGAGTTCCAGCAATAACTCAGCATGAGATCCTGAATAATAG AAGACATGTATTGACGAAGGATACTGCTGGTTCTGTCAAATTGTGGGAGATTACTCGAGG AGCTGTTATTGAAGACTTTGGCAAGGTTTCTTTTGAGGATAAGAAAAAAGAGTTGTTTGA GATGGTTAGCATACCTGCCTGGTTTACCATGGATGCTCGATTGGGATGCCTGTCTGTCCA CCTGGATACACCTCAATGCTTTTCTGCAGAAATATATGCAGTTGACTTAAACGTTGCAGG AGCACAGGAAGATCTTAAGATTAATTTGGCTCAGGAGACTCTCCGTGGTTTGTTAGTTCA TTGGAGTAAAAAAAAGCAGAGATCTGGCTCACACGGCTTGTCAAATGGTGACACTTCAAC AGGAAAAGATGTATCCTTGAAAAATTTGCCCCATCCAAGATCTGAGGTTGATGATGGGGC TGAAAATCATGCAAGTCAGATGCTTCCCTCATTTGAGTTTTCCACAGTTTCGCCTCCATC AATCATCACAGAAGGTTCAAGTGGAGGGCCTTGGAGAAAGAGAATTACAGATTTAGATGG AACCGAGAGCGATATCCCATGGTGGATTGTGGACTGTGTTGAGCATAATCGATTTCCAAA AGAGAATACAAAGTGTGGATTCTACTTGCATCCTGCTGAAGGGTCACCTGCACCGAACAT AACACAAGGGAAACTTAGTGCTCCACGGATATTGCGGATTCACAAAGTAGCTAACTATGT GGTCGAGAAACTTGATAGACCACTGGATGGCAATGCTGACAGCACATTTGGAATGGGATT GACTTCTGGCCAATCACAATTTTCAGCGCTAGATAGTTCTTCACGGCTTGGACTAAAACC ATGGCAAAAATTGAAACCTTCTGTAGAGATATTGTGTAACAGCCAGGTTTTGGCACCCGA AATGAGCTTGGCCACAGTGCGGGCTTATGTCTGGAAGAAGCCAGAGGATTTGATTCTTAA CTACAAAGTGGTCCAGTCAAGATGATTGCAACTTGAAACGAATGTTCACCCTAGGAGCTG AGGAAATCAGTGCGGAGCAGGTCTTGTTGAAGATAACCATACGACCTAGAGAGAAAACTA TCATCACGCTAGAGACAGAAGCGTTTCGCCCTTGTGTGCCTCCTTAGCGAAACCGCAAAA ATTCTACCTCTGTAAAGTTCTCTGTGAATGTTGAACTACCACCAGGCCCTCTAGTGAGGT GTCCCATAGCACAGGTGTAATGATCTCTTCTGGCTACCAAGCTTGTAAATTTAGGGATTT GGGGTGCTTAAATAAACTTTAAATGGGATATAATTTCCCCTTCTCTTTTTTTGTGTTTAC ACATATAAGATTTGTAAGGAAGGTATCAAACCGTGCAGCGATTTGCTGTTTGATCCTGAT CTTGGACTGTTACTTGCTGTTTTGC