Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0163500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3219061:3222884:-1 gene:Os12g0163500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os12t0163500-01);Similar to transcription factor. (Os12t0163500-02)
Sequence	ATGGAAGGCAACAACCTACCCTCTGGAAGCTTGATGCGTTCTAACTCTGGGCAAATGCAT GCTCCAAATCCTGGAAAGCAGGGCTTTGACCATACTCAGATGCCTGGCAATTTATCGATG CATGTAAACCAGTCTACAGATTCTGATCACTTGTCAGAATTTCAATTCGGAGAGCTTGGA AAGGTTGACCACCACCACCACCATCACCATCGTCAACACGCCAAGAACGGCATGAGTGAT GATGAGGAACATGGTGTCAACGAGGATGCCACTGATAGCCAGAGCGGCAAGGGAAAGAAG GGCGCTGCATGGCAGCGGATGAAGTGGACTGATTCAATGGTCAAGCTTTTAATTACTGCA GTATCTTACACTGGGGAGGATCCAGGAGCTGATTCAGGAGCTGGGAAGAGAAACTCTGCA ATAATGCAGAAAAAGGGCAAGTGGAAGGCAATATCAAAGGTCATGGGTGAGCGAGGCTGC AGTGTATCACCGCAGCAATGTGAAGATAAATTCAATGATCTCAATAAGAGATACAAAAGA CTTACAGATATCCTTGGCCGGGGTACAGCTTGCAAGATTGTGGAGAATCATGCTCTGCTG GATTGCATGAGTAATCTGTCTGACAAGATGAAAGATGATGCGAGGAAGATACTGAGTTCA AAGCACTTGTTCTACGAGGAGATGTGCTCCTACCATAATAACAATCGAGTGAGTTTGCCT GAAGATCCTGCCCTTCAGCGTTCACTGCAGCTTGCCCTTAGATGTAAAGATGAGCATGAT CTGAGGAGGGGAACAAGCGGAGATGCCGATGAAGATGATCAAAGTGTAGACTCTGATTCC GAGGAGGAGAATGATGAGGAAAATTACACATTACAAGGTGATAAGAGTGCCCTGCCCATG CATAAAAGATTGAGGCTTATGACAGATCAGGAGGATGTGGGTTTTGGCAACTCTTCCAGC TCACATGGATGTAGCAGGAGGTCTGATTCCCATGGCATATCACTGGATATCAACAAAGCA TTTCCTGATGGAACCAACTTGGCTTTGGCGCAAAAGGATTTGGCTACACAATCTGCAGAT CTTGAGGAACAAAGGTTGCAGATTGAAGTCCAGGCAGTCTATCTTGCAAAACAACGGCTC AAATGGGAGCGCTTCAGTAAAAATAAGGATAGAGAACTGGAACAGATGAGGTTAGAGAAT GAAAAAATGAGGCTTGAGAATAAGCGCTTGGAGCTGGAGGTAAGGCACAAAGAGTTAGAG CTTGAACTCAAGCAAAAAGGCAGTGGCAATCATGCATGA

Peptide Sequence

PEP ID	Os12t0163500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3219061:3222884:-1 gene:Os12g0163500 transcript:Os12t0163500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os12t0163500-01);Similar to transcription factor. (Os12t0163500-02)
Sequence	MEGNNLPSGSLMRSNSGQMHAPNPGKQGFDHTQMPGNLSMHVNQSTDSDHLSEFQFGELG KVDHHHHHHHRQHAKNGMSDDEEHGVNEDATDSQSGKGKKGAAWQRMKWTDSMVKLLITA VSYTGEDPGADSGAGKRNSAIMQKKGKWKAISKVMGERGCSVSPQQCEDKFNDLNKRYKR LTDILGRGTACKIVENHALLDCMSNLSDKMKDDARKILSSKHLFYEEMCSYHNNNRVSLP EDPALQRSLQLALRCKDEHDLRRGTSGDADEDDQSVDSDSEEENDEENYTLQGDKSALPM HKRLRLMTDQEDVGFGNSSSSHGCSRRSDSHGISLDINKAFPDGTNLALAQKDLATQSAD LEEQRLQIEVQAVYLAKQRLKWERFSKNKDRELEQMRLENEKMRLENKRLELEVRHKELE LELKQKGSGNHA

Transcript Sequence

Transcript ID	Os12t0163500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3219061:3222884:-1 gene:Os12g0163500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Homeodomain-like containing protein. (Os12t0163500-01);Similar to transcription factor. (Os12t0163500-02)
Sequence	AAAAGAAACAGAAATCTCCCGTCTCGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGAG GAGTCGCGGCTGAACAGGGGAGGGGCGGCGATCGAGCAGAGCAGGGGAGGGAATCCTGGT GATGTAACAAAAGTGGTCACCAGTGCCTGCGCAAAATCTCGTCTGTTTGTATATGGTATT AATAAGCAGCTTCAGTGCCTGGCTGATCCTTGGGGTGAATGGAAGGCAACAACCTACCCT CTGGAAGCTTGATGCGTTCTAACTCTGGGCAAATGCATGCTCCAAATCCTGGAAAGCAGG GCTTTGACCATACTCAGATGCCTGGCAATTTATCGATGCATGTAAACCAGTCTACAGATT CTGATCACTTGTCAGAATTTCAATTCGGAGAGCTTGGAAAGGTTGACCACCACCACCACC ATCACCATCGTCAACACGCCAAGAACGGCATGAGTGATGATGAGGAACATGGTGTCAACG AGGATGCCACTGATAGCCAGAGCGGCAAGGGAAAGAAGGGCGCTGCATGGCAGCGGATGA AGTGGACTGATTCAATGGTCAAGCTTTTAATTACTGCAGTATCTTACACTGGGGAGGATC CAGGAGCTGATTCAGGAGCTGGGAAGAGAAACTCTGCAATAATGCAGAAAAAGGGCAAGT GGAAGGCAATATCAAAGGTCATGGGTGAGCGAGGCTGCAGTGTATCACCGCAGCAATGTG AAGATAAATTCAATGATCTCAATAAGAGATACAAAAGACTTACAGATATCCTTGGCCGGG GTACAGCTTGCAAGATTGTGGAGAATCATGCTCTGCTGGATTGCATGAGTAATCTGTCTG ACAAGATGAAAGATGATGCGAGGAAGATACTGAGTTCAAAGCACTTGTTCTACGAGGAGA TGTGCTCCTACCATAATAACAATCGAGTGAGTTTGCCTGAAGATCCTGCCCTTCAGCGTT CACTGCAGCTTGCCCTTAGATGTAAAGATGAGCATGATCTGAGGAGGGGAACAAGCGGAG ATGCCGATGAAGATGATCAAAGTGTAGACTCTGATTCCGAGGAGGAGAATGATGAGGAAA ATTACACATTACAAGGTGATAAGAGTGCCCTGCCCATGCATAAAAGATTGAGGCTTATGA CAGATCAGGAGGATGTGGGTTTTGGCAACTCTTCCAGCTCACATGGATGTAGCAGGAGGT CTGATTCCCATGGCATATCACTGGATATCAACAAAGCATTTCCTGATGGAACCAACTTGG CTTTGGCGCAAAAGGATTTGGCTACACAATCTGCAGATCTTGAGGAACAAAGGTTGCAGA TTGAAGTCCAGGCAGTCTATCTTGCAAAACAACGGCTCAAATGGGAGCGCTTCAGTAAAA ATAAGGATAGAGAACTGGAACAGATGAGGTTAGAGAATGAAAAAATGAGGCTTGAGAATA AGCGCTTGGAGCTGGAGGTAAGGCACAAAGAGTTAGAGCTTGAACTCAAGCAAAAAGGCA GTGGCAATCATGCATGACATATTTTTAACCAATCAAGGCTGACTTGTAAGATGGTCGCTG ATGGCTTCTGTTGTTCGAGTAGACTGACGCAAGAAGGTTAAGGTTCAGCATACTTTTTTT GTTCTGCTTTTTTTCCCTACATTATTTGTGCTAGTGAGCTTGATTTGTACCATAACTCTT ATTCTTCAGTGAGCTTGCTAACCACACATACTCAGAAGATCATGTTATATGCTGTTAATG TTGTCAATTGTCATC