Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0163400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3212528:3217692:-1 gene:Os12g0163400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tubby-like protein 4, tubby-like protein 14, F-box protein 645 description:Tubby family protein. (Os12t0163400-01)
Sequence	ATGTCGTTCCGCAGCATTGTCCGCGACGTGCGCGACGGGTTCGGGAGCCTGTCCAGGCGA GGGTTCGAGGTGAGGCTGGTGGGGCACCGGAGGGGGAGGTCTCACAGCGCGGTGCACGAG CTGCGTGACGGCCACGCGGCCGCCGCCGCCGCCGACGTGGTCCAGAGCAGCTGCTGGGCT AACCTGCCGCCGGAGTTGCTCCGGGACGTGATCGAGCGGCTGGAGGCCAGCGAGGCGGCG TGGCCGTCCAGGAAGAACGTCGTCGCGTGCGCCGCCGTATGCCGGACATGGAGGGACATG TGTAGAGAGATCGTCAAGAACCCCGAGTTTTGCGGGAAGATCACTTTTCCTGTTTCCCTC AAGCAGCCTGGGCCCCGGAATGGAGCCATCCAGTGCTTCATTAAAAGGGATAAATCTACC CAAACTTACAACCTATATCTATGTCTTAGCTCAGCTGTGCTCGTTGAAAGTGGCAAGTTC CTTTTATCGGCGAAAAGATACTCCCGTGCAACCTGTACAGAATATACAATATTTATGAGT GCTGACAATACATCTAGGTCAAGCAACATGTACATTGGAAAATTGAGGTCAAATCTTCTC GGAACAAAGTTTGTAATATATGATACCCAACCTCCATGCAACACAGCCAATGTTTCACAG TCAGGGAAAACAAGCCGTAGGTTCTACTCCAGGAAGGTGTCGCCAAAGAACCCTTCCAGC ACCTACAGCATAGCTCAAGTTTCATATGAACTGAATGTCTTGGGGACTCGGGGTCCTAGG CGGATGAACTGTGTGATGCACTCAATCCCTGCCTCATCGCTTGAGGCTGGTGGCACTGTC CCATGCCAGCCAGACAGTGTGCTTGCACGCTCTCTTGATGAGTCATTTGGCAGCATCTCC TTTTCCAAGTCATCCATTATGGACCGCTCTATCCGTTTCAGCAGTAGCAGATATTCTGAC ATCTCAGTAGGTGGCCCCATGGTCGGAGGCCAGGCATTGGGTGACAGTGATGAGTCCAAG GAGAGGCCATTGATTCTCCGTAACAAGGCCCCAAGATGGCACGAGCAGTTGCAGTGCTGG TGCCTCAACTTCAAGGGCAGGGTAACCGTCGCGTCTGTGAAGAACTTCCAGCTTGTTGCT GCAACACAGCCTGCTGCTGGAGCCCCGACGCCATCGCAACCTGCCCCGCCGCCTCCACCT GATCATGACAAGGTCATACTACAATTTGGTAAGGTTGCGAAGGATATGTTCACAATGGAC TATCGTTACCCCCTTTCGGCCTTCCAGGCCTTTGCAATCTGCTTGAGTAGTTTCGACACC AAGCTGGCCTGCGAATGA

Peptide Sequence

PEP ID	Os12t0163400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3212528:3217692:-1 gene:Os12g0163400 transcript:Os12t0163400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tubby-like protein 4, tubby-like protein 14, F-box protein 645 description:Tubby family protein. (Os12t0163400-01)
Sequence	MSFRSIVRDVRDGFGSLSRRGFEVRLVGHRRGRSHSAVHELRDGHAAAAAADVVQSSCWA NLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSL KQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMS ADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKNPSS TYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDESFGSIS FSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCW CLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAKDMFTMD YRYPLSAFQAFAICLSSFDTKLACE

Transcript Sequence

Transcript ID	Os12t0163400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3212528:3217692:-1 gene:Os12g0163400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tubby-like protein 4, tubby-like protein 14, F-box protein 645 description:Tubby family protein. (Os12t0163400-01)
Sequence	ACCACCACTTGTTCTTTCCTTCCCCTCCTCTTCCTCCTCCTCCTCCGATCCCCATGCCTC CTCCGCCTCCGCCTCCCTCCCCCGCCGGCCACCGCTAGCTGCCGCCGGCGCCACCCCCGA GCGGTTGCGCCTAGGGTTCTTGATTTTGAGCTTCGGAGCGAGGCGAGGCGGAGATGTCGT TCCGCAGCATTGTCCGCGACGTGCGCGACGGGTTCGGGAGCCTGTCCAGGCGAGGGTTCG AGGTGAGGCTGGTGGGGCACCGGAGGGGGAGGTCTCACAGCGCGGTGCACGAGCTGCGTG ACGGCCACGCGGCCGCCGCCGCCGCCGACGTGGTCCAGAGCAGCTGCTGGGCTAACCTGC CGCCGGAGTTGCTCCGGGACGTGATCGAGCGGCTGGAGGCCAGCGAGGCGGCGTGGCCGT CCAGGAAGAACGTCGTCGCGTGCGCCGCCGTATGCCGGACATGGAGGGACATGTGTAGAG AGATCGTCAAGAACCCCGAGTTTTGCGGGAAGATCACTTTTCCTGTTTCCCTCAAGCAGC CTGGGCCCCGGAATGGAGCCATCCAGTGCTTCATTAAAAGGGATAAATCTACCCAAACTT ACAACCTATATCTATGTCTTAGCTCAGCTGTGCTCGTTGAAAGTGGCAAGTTCCTTTTAT CGGCGAAAAGATACTCCCGTGCAACCTGTACAGAATATACAATATTTATGAGTGCTGACA ATACATCTAGGTCAAGCAACATGTACATTGGAAAATTGAGGTCAAATCTTCTCGGAACAA AGTTTGTAATATATGATACCCAACCTCCATGCAACACAGCCAATGTTTCACAGTCAGGGA AAACAAGCCGTAGGTTCTACTCCAGGAAGGTGTCGCCAAAGAACCCTTCCAGCACCTACA GCATAGCTCAAGTTTCATATGAACTGAATGTCTTGGGGACTCGGGGTCCTAGGCGGATGA ACTGTGTGATGCACTCAATCCCTGCCTCATCGCTTGAGGCTGGTGGCACTGTCCCATGCC AGCCAGACAGTGTGCTTGCACGCTCTCTTGATGAGTCATTTGGCAGCATCTCCTTTTCCA AGTCATCCATTATGGACCGCTCTATCCGTTTCAGCAGTAGCAGATATTCTGACATCTCAG TAGGTGGCCCCATGGTCGGAGGCCAGGCATTGGGTGACAGTGATGAGTCCAAGGAGAGGC CATTGATTCTCCGTAACAAGGCCCCAAGATGGCACGAGCAGTTGCAGTGCTGGTGCCTCA ACTTCAAGGGCAGGGTAACCGTCGCGTCTGTGAAGAACTTCCAGCTTGTTGCTGCAACAC AGCCTGCTGCTGGAGCCCCGACGCCATCGCAACCTGCCCCGCCGCCTCCACCTGATCATG ACAAGGTCATACTACAATTTGGTAAGGTTGCGAAGGATATGTTCACAATGGACTATCGTT ACCCCCTTTCGGCCTTCCAGGCCTTTGCAATCTGCTTGAGTAGTTTCGACACCAAGCTGG CCTGCGAATGAAATCATCGGTGCGAAAGCATGGTTATCGATTATTGTAACAAATTGGGCC CCCTCCAAATTTAGCTGGGGGCTCTATCCTGTTGTTTGCTATTTATGCCCTATTAACTTG TAGTCATTAGAAAACCAATGTTTTTTTTCTAGACATGTTCCCTGATTTGTAGATGCTGTT GTGTTGTATCTGTATCCCTACATTCTCCTTTTCTTTTGTTTTTTTTAACAGGTTGCTCTG TAGAAGCATATTTGCTCTGCCTGTAACTGTAATAATTAGCTGACTGAATTGTTATGTTCA TGCTTGGCTTGTGCCTAGAGTTTCAAATCTTGAGTTGTATCAAAATTTCGTAATGGCTGC CTGTTGTGGGAGATGTGCAATGTATTTTTGATGAACTTTGTTGAGTTGCAATAAAGCAAC AATCAGTTCCATGTGCTTCC