Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0163200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3201632:3207773:1 gene:Os12g0163200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0120 domain containing protein. (Os12t0163200-01)
Sequence	ATGGCGAAGAAGCTCGGGAAGAAGGCGCGCAAGTTCGCGCGCAAGCACCTCCAGTCCGCC GCCAAGCGTAACCGCAAGCAGCGCTCGCAGTTCGCCCGCCGCCCTCGCAGAGGTGGGAGC GGTCGCGGGAACGAGCGCGATGGCGATGGCGATGACGAGATGCCGCAGCGAGCAATCGAT AACGTCATGAACAACGGTGATGCTGCAGCTTTGGTTAATGGCCTAGAGTTCCCGGAAGAT GAATGTGAATTAAACAGTGATCTGTCTGATAGTGATGGTTATCTTTCAGAGGACTCTGAA TGTCTATATTATTCTGACAGTGAGGATGGCAATGCTGTCAATGATTGTTTTGTCCAAGAT GGTTTAGATGGCGAGAATGATAAGATGAATACAGAGATAAAAAAACAAAAGAAGAAGTTG AACAAGTTGATGGACAAGGACCCTGAGTTTGTAAACTACCTTGAAAAATGGCAATCAGAG TTGAAGAGTGATGGAAGTAAAGAGGATTCTGATGAAGATGAGATGGACTCTGTGGATAAT GATGCTGACTCCAGTGATGAAAATCTTTCAAATGATAAGATACTGACAAGGAAGACTATA AGTGAATGGTGCCAGTTAGTTGCAAAGGAACCTAAAGCACCTTCTCTACGCAGCCTATTA AATGCTTACCGGGATGCTTGTCGATTTGGTGTTTCCAAGAGCCCTTCTGTGCAGAGAATT CAAAGTACTGAAGTGTTTCATCAGATAATAACATTTGTCCTTTCCGAAGCAGACAACATT TTCCATGCTCTCTTAGAAATTTCGGATGATGTAAACAAAGGGAAAATTATGAATCTGAGA AGTGCAAAGAAATGGAAAACTATTGAACCACTCGTAAAGTCTTACTTGCAGAATTCTCTT GATCTGCTTAGTCAACTTACTGACAACCAAATACTTGCATTTGTCTTGACTCGACTGAGA GCATCCGCAGTTCTTTTTTCTGCATATCCATCAACATCAAGGAGGCTCCTCAAGATCTTA ATTCGTTTGTGGGCCAGTGGAGATCATAACTTGTCTCTGTCCTCATTTCTTATGATACGG GAAGTGGCTTCGCTGTTACCAGAATGTTTGGATCTCTGCTTAAATAAATCTTATAATACA TACCTTGCTAGTTCCAAGCTTGTGAATGAAGGAAATATAAAGCACATTGATTTTTTAATG GACTGTCTAGTGGAGCTCTATTCTCTTGATGTTCAGAAATCATGTGAGAGGGCAACTACC TCTATAGGACAACTGAATTCTATTCTCAGGCAGGCTTGTAAAACAAAAGAAAAGGAAGAC CTCAGGAAGGTAGATAACTGGCAATATATTAACTGTGTAAACCTATGGGTTAGGTTTCTT TGTTGTAACTACAAGGACTACAATATGCATCCATTACTTTCTTCAGTTGTTCAAATAATA AGAGGAGTGGCTCACTTATTCCCAGGCACACGTTACTTACCATTGAGACTGAGGCTTGTG CAGATGCTGAATGAGCTTTCTAGTTGCAGTCAGATGTTCTTTCCAATTCCATCTTTGTTA TTTGATTGCCTAGAATTTAGAGATACCTCTCAGAAAGAACAAGGAAAAAAAGCAAAGGTC AACTTTTCATCACTATTGAAGGTGCCAAAGAATATGCTGAAGTCAAGAGACTTCCACGAG GAGTGCATTCTTTCAGCTATTGATGTTCTGTCTGCACATTTTGCCCAATGGTGCTATCAT GTCTCTTTTCCAGAAGTAGCCACCATTCCACTGATCCTCCTGAAAAGATTACATGAGCAG ACAACAATTGAATCACTTCGTCGTCCTATTAAACGACTGATAGACCAGGTAGACGAGAAC AAGAACATTGTAGAAAGGAAGAGAGACGGGGTCTCATTTTCACCTAATGATACAACATCA GTTGAGAGCTTCGTTCAGGACCTTCAGGCAGAGAAGAGCGGTGCAAAAATTTCACAGTTT TACAAAATTGTACCAAAAAAACTAAGGTAG

Peptide Sequence

PEP ID	Os12t0163200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3201632:3207773:1 gene:Os12g0163200 transcript:Os12t0163200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0120 domain containing protein. (Os12t0163200-01)
Sequence	MAKKLGKKARKFARKHLQSAAKRNRKQRSQFARRPRRGGSGRGNERDGDGDDEMPQRAID NVMNNGDAAALVNGLEFPEDECELNSDLSDSDGYLSEDSECLYYSDSEDGNAVNDCFVQD GLDGENDKMNTEIKKQKKKLNKLMDKDPEFVNYLEKWQSELKSDGSKEDSDEDEMDSVDN DADSSDENLSNDKILTRKTISEWCQLVAKEPKAPSLRSLLNAYRDACRFGVSKSPSVQRI QSTEVFHQIITFVLSEADNIFHALLEISDDVNKGKIMNLRSAKKWKTIEPLVKSYLQNSL DLLSQLTDNQILAFVLTRLRASAVLFSAYPSTSRRLLKILIRLWASGDHNLSLSSFLMIR EVASLLPECLDLCLNKSYNTYLASSKLVNEGNIKHIDFLMDCLVELYSLDVQKSCERATT SIGQLNSILRQACKTKEKEDLRKVDNWQYINCVNLWVRFLCCNYKDYNMHPLLSSVVQII RGVAHLFPGTRYLPLRLRLVQMLNELSSCSQMFFPIPSLLFDCLEFRDTSQKEQGKKAKV NFSSLLKVPKNMLKSRDFHEECILSAIDVLSAHFAQWCYHVSFPEVATIPLILLKRLHEQ TTIESLRRPIKRLIDQVDENKNIVERKRDGVSFSPNDTTSVESFVQDLQAEKSGAKISQF YKIVPKKLR

Transcript Sequence

Transcript ID	Os12t0163200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3201632:3207773:1 gene:Os12g0163200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0120 domain containing protein. (Os12t0163200-01)
Sequence	GGCGCTACCGTCTTCTCGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGAGAGAGAGAG GAGAACACCTGAAACCCTAACCCTAGCGAGGCAAGAGGGGAGGGGATGGCGAAGAAGCTC GGGAAGAAGGCGCGCAAGTTCGCGCGCAAGCACCTCCAGTCCGCCGCCAAGCGTAACCGC AAGCAGCGCTCGCAGTTCGCCCGCCGCCCTCGCAGAGGTGGGAGCGGTCGCGGGAACGAG CGCGATGGCGATGGCGATGACGAGATGCCGCAGCGAGCAATCGATAACGTCATGAACAAC GGTGATGCTGCAGCTTTGGTTAATGGCCTAGAGTTCCCGGAAGATGAATGTGAATTAAAC AGTGATCTGTCTGATAGTGATGGTTATCTTTCAGAGGACTCTGAATGTCTATATTATTCT GACAGTGAGGATGGCAATGCTGTCAATGATTGTTTTGTCCAAGATGGTTTAGATGGCGAG AATGATAAGATGAATACAGAGATAAAAAAACAAAAGAAGAAGTTGAACAAGTTGATGGAC AAGGACCCTGAGTTTGTAAACTACCTTGAAAAATGGCAATCAGAGTTGAAGAGTGATGGA AGTAAAGAGGATTCTGATGAAGATGAGATGGACTCTGTGGATAATGATGCTGACTCCAGT GATGAAAATCTTTCAAATGATAAGATACTGACAAGGAAGACTATAAGTGAATGGTGCCAG TTAGTTGCAAAGGAACCTAAAGCACCTTCTCTACGCAGCCTATTAAATGCTTACCGGGAT GCTTGTCGATTTGGTGTTTCCAAGAGCCCTTCTGTGCAGAGAATTCAAAGTACTGAAGTG TTTCATCAGATAATAACATTTGTCCTTTCCGAAGCAGACAACATTTTCCATGCTCTCTTA GAAATTTCGGATGATGTAAACAAAGGGAAAATTATGAATCTGAGAAGTGCAAAGAAATGG AAAACTATTGAACCACTCGTAAAGTCTTACTTGCAGAATTCTCTTGATCTGCTTAGTCAA CTTACTGACAACCAAATACTTGCATTTGTCTTGACTCGACTGAGAGCATCCGCAGTTCTT TTTTCTGCATATCCATCAACATCAAGGAGGCTCCTCAAGATCTTAATTCGTTTGTGGGCC AGTGGAGATCATAACTTGTCTCTGTCCTCATTTCTTATGATACGGGAAGTGGCTTCGCTG TTACCAGAATGTTTGGATCTCTGCTTAAATAAATCTTATAATACATACCTTGCTAGTTCC AAGCTTGTGAATGAAGGAAATATAAAGCACATTGATTTTTTAATGGACTGTCTAGTGGAG CTCTATTCTCTTGATGTTCAGAAATCATGTGAGAGGGCAACTACCTCTATAGGACAACTG AATTCTATTCTCAGGCAGGCTTGTAAAACAAAAGAAAAGGAAGACCTCAGGAAGGTAGAT AACTGGCAATATATTAACTGTGTAAACCTATGGGTTAGGTTTCTTTGTTGTAACTACAAG GACTACAATATGCATCCATTACTTTCTTCAGTTGTTCAAATAATAAGAGGAGTGGCTCAC TTATTCCCAGGCACACGTTACTTACCATTGAGACTGAGGCTTGTGCAGATGCTGAATGAG CTTTCTAGTTGCAGTCAGATGTTCTTTCCAATTCCATCTTTGTTATTTGATTGCCTAGAA TTTAGAGATACCTCTCAGAAAGAACAAGGAAAAAAAGCAAAGGTCAACTTTTCATCACTA TTGAAGGTGCCAAAGAATATGCTGAAGTCAAGAGACTTCCACGAGGAGTGCATTCTTTCA GCTATTGATGTTCTGTCTGCACATTTTGCCCAATGGTGCTATCATGTCTCTTTTCCAGAA GTAGCCACCATTCCACTGATCCTCCTGAAAAGATTACATGAGCAGACAACAATTGAATCA CTTCGTCGTCCTATTAAACGACTGATAGACCAGGTAGACGAGAACAAGAACATTGTAGAA AGGAAGAGAGACGGGGTCTCATTTTCACCTAATGATACAACATCAGTTGAGAGCTTCGTT CAGGACCTTCAGGCAGAGAAGAGCGGTGCAAAAATTTCACAGTTTTACAAAATTGTACCA AAAAAACTAAGGTAGAAAAAGAAGTGCTATGAAATGCGAACACACTTTTTTGGCTACCGG ATTATCGGAAGAAGGATGCTGGGAGCATGAATGTCGCACGCCATATCGGTCAACTCATTT TTCTCTGGGAGATATTTATGAATCTGAGTTGATCACCTCTTATGACATCAACAATGGCAT TGCTCGAGTTGTTGAAACCGGTGAAGTGAATGAGCCTCTTGCTGAGCAAAGTTTTGAGCG TGAATGTTACCGTTTATTGATGCATTGGGCAATGAGCCTCTTGCTTAGCAAAGTTTTGAG CGTGAATGTTACTATTTGTTGATGCATTACTGTGGAGGTTGAGACTGTTCTTCCTGACGA AAGGATTTTGTGATCTACTTTTGCACATGACTTATGATTTGCCAGACAATTATTCGATTA GCATTTCACTGTTTCCTTAGGCAGATCGATTAGGATATTGAAATCATATTATTGTCTATT TGAAGGGACTGGCTGTAATCCCTACT