Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0162900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3179975:3184795:-1 gene:Os12g0162900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os12t0162900-01)
Sequence	ATGTCCCAGCTCGTGCTCCTCCGCCGCATCCCCGTCCGCCGCCACTGCGGCCCCAGCAGC AGCCGCCTCCTCAGCTCGGCCGCCGCCGGGGCAGGCGGCGTGGGGCGGCGGGGACCCTAC CAGCAGCAGCAGCAGGAGGAGGAGGAGAGCAAGGCGGTGAAGGTGTCCGTGTGGTGGGAC TTCGAGAACTGCAACCTCCCCAACGGCGTCAACCCCGGCCGCGTCGCCCCGCGCGTCACC GCCGCGCTCCGCGCCGCCGGCATCCGCGGCCCGCTCTCCATCACCGCCTTCGGGGACGTC GTCCAGCTCGCCCGGCCGTCCCAGGAGGACCTCGTCGCCACCGGCGTCTCCATCTCCCAC GTCCCCAACAGTGGAAAGAATAGTTCTGATCGGTCATTTATGGCTGATCTTGTCTATTGG ATCGCACAGAATCCCCCACCAGCCCATTTTTTCCTTATATCTGGGGATAAAGACTTTGCA AACATTTTGCATCGCCTGCGAATGAGCAACTATAACATACTGCTTGCTTCTCCTGGTACT GCTACCACCAGTGTACTCTGTAGTGCAGCAACAATCATGTGGCCCTGGGAAGCTCTAGTG AAAGGGGAGGATTTCTCACCTAAACGTTTTAACCACCCACCTGATGGTTTAGCTGGTTCT TGGTATGGTCACTATAAAGGAGCCCTGGATGATCCCTTTGTAGACACAGAACCCGAGGAA CTCGTTGTAGTACCATCTGATCTCAAGCATGGTTCAATCCCCAAATATGTGGTTAATGCG ATCCAGCAGGTACTAAAATCATATCCTAATGGAGTGAATCTGTCAGACCTCCGACTAGAG CTTAAAAAGAAAAATATTTATCTGGGAAATGATTTTTTTGGCCACAAGAAGTTCTCTTGC CTTCTCCAATCGCTGCCAAATTTTGTGGAATTTATTAGTCCTCCAGTTGGTGCAAACCAG CCATGTGTAGTTGCAGCCAACAGAAAATTGATGGGTCCTGACAAACAAAATTTTGAGAGT TCAACTGAAAGTAATGTCGGGGACAATAACTTGAATCGAGCAATACACAATGACAAGCCA CCTCCACTCCCTGTGTCGACTTCTTTTTCTGAAAAGAATGCTAAGACCGAAAATTCTTCT CAAAATATTGCCAAGAAGCTGCAGACTGCAAGCGAGAATCCACCTACATTTGCTGTCTTA TCTTCCCGATCAGATGTGTTACCTGAGGATCAAAAGGAGCACCCAGCTGCCAACTTGAAT GCACAGATAGAATCACCAGAGGACCACAAGGAAGTTGATCCTACGACTGCCTCTGGAATT CCCTCTTCCTCAGGGGTGGAAGACAATGTTAACAAGGAAGGGCTATTCAAAAGGATCTGG CTATTGTGGAAAGGCCCTGAGAGTGCCAAGTCTGAAGTTTCCCATCTTGAAAGTACTTCC ACTGTAGTGGTTGGTGATGCCCAATCTCCTCAGCAAGAGCATAATGCTAATGAGCATCGG AGACTTTTGAAGAGAGTCTATAAAAAATCTTGTCGAAATGGCAGCACAGACGGATCTGAC AGTGTGACAACAGGCAGTGCATCAACTTCATCTCATGATGACCGCTCTAAAAAGTTAAAG CATGTGGATGATATGAGATCATTAGAAAGGGATACATCAAATTCAGAACCATGTGATAGA TCTGTATCTGTTTCCGTGGACAAAGCTGAGAAAGGAGATGGTATTTCCAAAATGGATAAG GGTTTATTTAGCTGGGTAACAGGGTGGTTGAAATTTGGAAAATCAGATGCAGATAATGTT ACAGCCAATAGAAATGTGATTGATGAAGCAAGCACAGACTCACTAAAAGGACCTGAATCC TTGAAGGTTTCAGCTTGTGGAAGTGGAGAAGAGGAGGTTCATGAAATATTCACAAAATCT TTCTTCTGGGATGTTTTGCAGCAACAGCTATCAAAGCCCCTTGGTTCTGAGCTTGTTTCA AAAGCAAAGACAAGGGAGGAGTTAGTGCATCAATTGCACAAATTAGATTGTTGGCCTCTG AAAGGCCTAGCTGAGAAAGATCTCCATCAGCTGGTGAATATTTTAGTTTCAGAGAAGAAA TGGGTTGAAGAAACCCCTTCCAGGTATTTTCCGTTTCGTCTTACCCTTCCTCACAAGAGA ACATGCATTCCATCGAACTCCAGGAAGTTTGATGGTCTCAGTTCTCTGTTTTCCAATGGG AAGCCATTGCCGGGCAAATACACTGGTGATCAAAGCACAAACAGTCCTCTCCCTAGGGAG GAAACTTTGTCGGACTGTCACAAGCTGTTAAAGGACCTTCTTCTGGAATATGAATATGGT TTTAACATCAGCATTTTCAAGCTTCGTTTTGCTCAGAAGCATGGATATGAGCTAGACCCT CAAAAGCTTGGATATCCAGACCTTAAGTCCCTGTTGCAGATTATGCCTGGTGTGAGAGTA AAATTTCCAAGGGTTCTACCTGCAGAAAACGGAAATGGCCAAGCTGGCAGCAAGGGCAAT GGAAATCAAAGTAATGGCGATGACTTTGTTTGGGAGGAACTTGGTCCTGTATCTGCTACC ACTGAAACTGTGCAAACTGTTGACAAAGAAATGTGCTACCGTCCTCCTACTCTTTCAGAT GATGATTTTTCAGAGGATGAGAACCATGCAGACCAGCAGCCTAGAAAAGAGGCTGAAGCA AGCTCGCTCCTCCAAATTATTGATTCCTGGCACAATAGTAAGGATGTCTCTAGCAAAAAA ACTCAAGACATTGATGGGCTTGTTGATTGTTCAAGGAGTGACCATGGCTATCTTGACAAT CTGACCGGAGGAAATGCACCGAAGCCTACAAGGCCACAGCATAAACAGTACTCTTTCGTG TCAGACTCGGAAGAAGATACAGAGAAGGGTAAGCTAGTTGAGAGCGTCTTGGGCAGCTTG CAAAAAGCACGGACCTCAAAGTTGCACAACTGA

Peptide Sequence

PEP ID	Os12t0162900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3179975:3184795:-1 gene:Os12g0162900 transcript:Os12t0162900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os12t0162900-01)
Sequence	MSQLVLLRRIPVRRHCGPSSSRLLSSAAAGAGGVGRRGPYQQQQQEEEESKAVKVSVWWD FENCNLPNGVNPGRVAPRVTAALRAAGIRGPLSITAFGDVVQLARPSQEDLVATGVSISH VPNSGKNSSDRSFMADLVYWIAQNPPPAHFFLISGDKDFANILHRLRMSNYNILLASPGT ATTSVLCSAATIMWPWEALVKGEDFSPKRFNHPPDGLAGSWYGHYKGALDDPFVDTEPEE LVVVPSDLKHGSIPKYVVNAIQQVLKSYPNGVNLSDLRLELKKKNIYLGNDFFGHKKFSC LLQSLPNFVEFISPPVGANQPCVVAANRKLMGPDKQNFESSTESNVGDNNLNRAIHNDKP PPLPVSTSFSEKNAKTENSSQNIAKKLQTASENPPTFAVLSSRSDVLPEDQKEHPAANLN AQIESPEDHKEVDPTTASGIPSSSGVEDNVNKEGLFKRIWLLWKGPESAKSEVSHLESTS TVVVGDAQSPQQEHNANEHRRLLKRVYKKSCRNGSTDGSDSVTTGSASTSSHDDRSKKLK HVDDMRSLERDTSNSEPCDRSVSVSVDKAEKGDGISKMDKGLFSWVTGWLKFGKSDADNV TANRNVIDEASTDSLKGPESLKVSACGSGEEEVHEIFTKSFFWDVLQQQLSKPLGSELVS KAKTREELVHQLHKLDCWPLKGLAEKDLHQLVNILVSEKKWVEETPSRYFPFRLTLPHKR TCIPSNSRKFDGLSSLFSNGKPLPGKYTGDQSTNSPLPREETLSDCHKLLKDLLLEYEYG FNISIFKLRFAQKHGYELDPQKLGYPDLKSLLQIMPGVRVKFPRVLPAENGNGQAGSKGN GNQSNGDDFVWEELGPVSATTETVQTVDKEMCYRPPTLSDDDFSEDENHADQQPRKEAEA SSLLQIIDSWHNSKDVSSKKTQDIDGLVDCSRSDHGYLDNLTGGNAPKPTRPQHKQYSFV SDSEEDTEKGKLVESVLGSLQKARTSKLHN

Transcript Sequence

Transcript ID	Os12t0162900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3179975:3184795:-1 gene:Os12g0162900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os12t0162900-01)
Sequence	CGCCGCCACCGCCTGCGCCGCCGGCGAGAGACCCCGGCCCCCGCCGATCCAAACCCCACC CACCACCCGCAGCGGCCATGTCCCAGCTCGTGCTCCTCCGCCGCATCCCCGTCCGCCGCC ACTGCGGCCCCAGCAGCAGCCGCCTCCTCAGCTCGGCCGCCGCCGGGGCAGGCGGCGTGG GGCGGCGGGGACCCTACCAGCAGCAGCAGCAGGAGGAGGAGGAGAGCAAGGCGGTGAAGG TGTCCGTGTGGTGGGACTTCGAGAACTGCAACCTCCCCAACGGCGTCAACCCCGGCCGCG TCGCCCCGCGCGTCACCGCCGCGCTCCGCGCCGCCGGCATCCGCGGCCCGCTCTCCATCA CCGCCTTCGGGGACGTCGTCCAGCTCGCCCGGCCGTCCCAGGAGGACCTCGTCGCCACCG GCGTCTCCATCTCCCACGTCCCCAACAGTGGAAAGAATAGTTCTGATCGGTCATTTATGG CTGATCTTGTCTATTGGATCGCACAGAATCCCCCACCAGCCCATTTTTTCCTTATATCTG GGGATAAAGACTTTGCAAACATTTTGCATCGCCTGCGAATGAGCAACTATAACATACTGC TTGCTTCTCCTGGTACTGCTACCACCAGTGTACTCTGTAGTGCAGCAACAATCATGTGGC CCTGGGAAGCTCTAGTGAAAGGGGAGGATTTCTCACCTAAACGTTTTAACCACCCACCTG ATGGTTTAGCTGGTTCTTGGTATGGTCACTATAAAGGAGCCCTGGATGATCCCTTTGTAG ACACAGAACCCGAGGAACTCGTTGTAGTACCATCTGATCTCAAGCATGGTTCAATCCCCA AATATGTGGTTAATGCGATCCAGCAGGTACTAAAATCATATCCTAATGGAGTGAATCTGT CAGACCTCCGACTAGAGCTTAAAAAGAAAAATATTTATCTGGGAAATGATTTTTTTGGCC ACAAGAAGTTCTCTTGCCTTCTCCAATCGCTGCCAAATTTTGTGGAATTTATTAGTCCTC CAGTTGGTGCAAACCAGCCATGTGTAGTTGCAGCCAACAGAAAATTGATGGGTCCTGACA AACAAAATTTTGAGAGTTCAACTGAAAGTAATGTCGGGGACAATAACTTGAATCGAGCAA TACACAATGACAAGCCACCTCCACTCCCTGTGTCGACTTCTTTTTCTGAAAAGAATGCTA AGACCGAAAATTCTTCTCAAAATATTGCCAAGAAGCTGCAGACTGCAAGCGAGAATCCAC CTACATTTGCTGTCTTATCTTCCCGATCAGATGTGTTACCTGAGGATCAAAAGGAGCACC CAGCTGCCAACTTGAATGCACAGATAGAATCACCAGAGGACCACAAGGAAGTTGATCCTA CGACTGCCTCTGGAATTCCCTCTTCCTCAGGGGTGGAAGACAATGTTAACAAGGAAGGGC TATTCAAAAGGATCTGGCTATTGTGGAAAGGCCCTGAGAGTGCCAAGTCTGAAGTTTCCC ATCTTGAAAGTACTTCCACTGTAGTGGTTGGTGATGCCCAATCTCCTCAGCAAGAGCATA ATGCTAATGAGCATCGGAGACTTTTGAAGAGAGTCTATAAAAAATCTTGTCGAAATGGCA GCACAGACGGATCTGACAGTGTGACAACAGGCAGTGCATCAACTTCATCTCATGATGACC GCTCTAAAAAGTTAAAGCATGTGGATGATATGAGATCATTAGAAAGGGATACATCAAATT CAGAACCATGTGATAGATCTGTATCTGTTTCCGTGGACAAAGCTGAGAAAGGAGATGGTA TTTCCAAAATGGATAAGGGTTTATTTAGCTGGGTAACAGGGTGGTTGAAATTTGGAAAAT CAGATGCAGATAATGTTACAGCCAATAGAAATGTGATTGATGAAGCAAGCACAGACTCAC TAAAAGGACCTGAATCCTTGAAGGTTTCAGCTTGTGGAAGTGGAGAAGAGGAGGTTCATG AAATATTCACAAAATCTTTCTTCTGGGATGTTTTGCAGCAACAGCTATCAAAGCCCCTTG GTTCTGAGCTTGTTTCAAAAGCAAAGACAAGGGAGGAGTTAGTGCATCAATTGCACAAAT TAGATTGTTGGCCTCTGAAAGGCCTAGCTGAGAAAGATCTCCATCAGCTGGTGAATATTT TAGTTTCAGAGAAGAAATGGGTTGAAGAAACCCCTTCCAGGTATTTTCCGTTTCGTCTTA CCCTTCCTCACAAGAGAACATGCATTCCATCGAACTCCAGGAAGTTTGATGGTCTCAGTT CTCTGTTTTCCAATGGGAAGCCATTGCCGGGCAAATACACTGGTGATCAAAGCACAAACA GTCCTCTCCCTAGGGAGGAAACTTTGTCGGACTGTCACAAGCTGTTAAAGGACCTTCTTC TGGAATATGAATATGGTTTTAACATCAGCATTTTCAAGCTTCGTTTTGCTCAGAAGCATG GATATGAGCTAGACCCTCAAAAGCTTGGATATCCAGACCTTAAGTCCCTGTTGCAGATTA TGCCTGGTGTGAGAGTAAAATTTCCAAGGGTTCTACCTGCAGAAAACGGAAATGGCCAAG CTGGCAGCAAGGGCAATGGAAATCAAAGTAATGGCGATGACTTTGTTTGGGAGGAACTTG GTCCTGTATCTGCTACCACTGAAACTGTGCAAACTGTTGACAAAGAAATGTGCTACCGTC CTCCTACTCTTTCAGATGATGATTTTTCAGAGGATGAGAACCATGCAGACCAGCAGCCTA GAAAAGAGGCTGAAGCAAGCTCGCTCCTCCAAATTATTGATTCCTGGCACAATAGTAAGG ATGTCTCTAGCAAAAAAACTCAAGACATTGATGGGCTTGTTGATTGTTCAAGGAGTGACC ATGGCTATCTTGACAATCTGACCGGAGGAAATGCACCGAAGCCTACAAGGCCACAGCATA AACAGTACTCTTTCGTGTCAGACTCGGAAGAAGATACAGAGAAGGGTAAGCTAGTTGAGA GCGTCTTGGGCAGCTTGCAAAAAGCACGGACCTCAAAGTTGCACAACTGAAATCTGTTGT ATGCATCAATGCTGACTTGCTGCTTTCATCCCCAAATTGCAGCATTAGCCTGGTAACATT CTGAAAGCAGAGTGTTCCTTGTTTGGATGAATCATACACCAAACAAAATGGCACTCCTAT GGTTATCTGTCAACTGTAGGTTCAGCTGCTATAATATCGGCAGGAGTCATCTAACAAAGT AGCATTCTTTTGTTCTCCCCAGTTGAGGGAGAATGCTTATGATGTCATATGGTTAACAAA GTCTAGAGTTCTAGAGTTATAATAAGGAGGAATTCTGGAACCTGAACGCTTGGAAGTTTT TAACCAAGATGTTATTATCATTTGCTCTGC