Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0160900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:3059460:3063694:1 gene:Os12g0160900 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAR1 domain containing protein. (Os12t0160900-01)
Sequence	ATGGAAGAAACTAGCATTGCTATTGAGATTGATGGGGAGGCGATCTGTCTGGACAGTGTA GGAGATAATGAGGAGCAAGGAACTCAGGAGAACCAAGAGATACAAATAATTTATGATGCT GAAAATGAGGGACAAGTTGCTTTCGACAATGGAGAACAGGGAAAGGAGGAACATCCCATG AGGAATGAAGAGGAGAACCAGGAAAATATTCCTGTAATTCCAAGCCGTGAGGAGTTGACT GAAGAATTGCGGAACAAAATTGCCAATAGTGAAGAAGAAGCTTACAGGCTGTACTGTGAC TATGGACATCGTATGGGCTTTAGTGTGAGGAAGGGGAAACAGTACTACTTTACAGGGACC AAAACTATTCGTACAAAAGACTATTACTGCTCAAAGGAAGGTCTAAAGGACGATGAGCAG CTTACTGAGGCAAACTTTAATAAGCCAGACACCAGAACTAACTGTAAAGCAATGGTCCGT TATAGAGTTGATTCGGAAGGCCATTGGCGAGTTATTCAGATTGTTCCTGAACATAACCAT GAGTTGGTTCGACCTGAAGAGGTACACTTGCTGAGATCAGTGAGGACTCTTTCAATTCCT AAGCCCGGTGTGCTGAATGCAATGGTAAATGCTGAAATACAAGCAATGCATGAAAATTTG CACATGAATGATGATGGTGCTGAATGTCAGAGTCAGCTTGGCATCCAAAGTTACACTCTG CTTGAACCAGAGGACTCTGAGGCACTTGTAGGTTATTTCAAGCGTAGAACAATTGAACAA GGTATGTTCTACTGGGATGTGCTGGTAGAGGATGGCCGAATGACAAATTTTTTTTGGAGG GATGGAAGAAGCCGTGTTGATTACGACTGTTTTGGAGATGTCGTGGTGTTTGACACAGCA TATCGTACCAGCAAATATAATATGATTTGTGCCCCATTTGTTGGTGTTAATCACCATGGC CAAGATGTTATGCTTGGTTGTGCACTTCTGTTAGATGAGTCCCTGACATCCTATGAATGG TTGTTCAAGTCATTCTTAGATTCAATGGGTGGCCATCCTCCTAAAACAATTTTCACTGTT ATGGCTGAAACTATATCCAAGGCAATTGAAGGCGTTCTCCCTGAGACACGTCACTGCATC TGTCAATGGAGTATTGAAAAGAACCTACAGTCCCATTTAGGCACTCTAAATGTTTCTGGA ACATTTCATAGCATGTTGACAAAATGCATGAGAGAATGTGAGTCAGAAGCAGAGTTTGAG GAAACATGGGCAATGATGCTTAACGAATGCAATATGCAGGATGACCAATGGCTCTCTGAT CTGTATCAGCAGAGGCGTAAATGGTCCACAGTTCATCACAGGGATGCATTTGATGGTGGA ATCAATTCACTCGATAGGAGTGATAGTTCAAACAATGTCCTGAGCAGCATTGCTAATGAA TCAACTTCACCCACTCAATTTATTCTTGACTTTGATAAATTGGTAGGGAGTTGGCGTACA AATGAATCCGCCGAGGACATTCAGTGCACCCAGACATCCCCAGAATCTAGAGTTAAGCAT AGGAGTATTTTGGAGCATGCTGCTGAAGTTTATACGCGCAAAGTCTATAAATCTCTTGAA ACAGAATATCTAGATGGATGCAGTGCAACTTCATACCAGGAAATGCAGTGTAGTGAAACA TTGTACCGGTTTGAGTTCATTTTGCAAAGAAGTGGCCCAAAAGTTCAGGTAGTTTTTCTT GACACCTCTACCATGGAATTGAGCTGTACTTGTAAAAAATTTGAGACAACAGGCATACTT TGTTCGCATGCAATAAATGCACTTGATCTCAAGAATTTTGATAGAATTCCTGAAAGGTAT GTTTTAAAACGGTGGAAAAAGTATGTTAGGAAAGGAACATATCTATTTCCATCTGATGAG TTTGTGGGACAAGATTGCACAGAACCTGGGCTTGCATTTCGTAACAAAGCAATGCGATTT GTGTATGATCTGTTGATGAAGAGCAAAGGTCATCAGGATACGAGGAAACTTATTCTGGAT GTGTTTGAAAATGGAGAAAAATTAGTAGAAAGCCTATGTGAACTCAAGAGATTGAATGCC CATGCCTCTGGAAGAGAGAAAGATGGAAGTAAGGTTGAAAAGCGGAAGAAAAAATCAGCC AAGCAAGAAAAAAGCTCAAGAAATGTTAAACAAGCAGTTTCATCTCAGACAGCTGACACA GTTTTAGTTGATCCACCAAATCAAAATCAATATTTTGCAACAGAAGATATGGCAACAAAC TCATCTATCGGTAGACCTTTCTTCTACCAGGGGTTTCCTTCTGCTGGTGTTTCAACAAGT CAGATTCAGGGGCATACGAATATTCATTCTGTGCCTCAGTGTGCACCACAGGAATATTCA GCCTATGGCGCAGCTCATCCTCCTCCAACATTTGGTGGTGGAAGAAATTTCTGA

Peptide Sequence

PEP ID	Os12t0160900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:3059460:3063694:1 gene:Os12g0160900 transcript:Os12t0160900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAR1 domain containing protein. (Os12t0160900-01)
Sequence	MEETSIAIEIDGEAICLDSVGDNEEQGTQENQEIQIIYDAENEGQVAFDNGEQGKEEHPM RNEEENQENIPVIPSREELTEELRNKIANSEEEAYRLYCDYGHRMGFSVRKGKQYYFTGT KTIRTKDYYCSKEGLKDDEQLTEANFNKPDTRTNCKAMVRYRVDSEGHWRVIQIVPEHNH ELVRPEEVHLLRSVRTLSIPKPGVLNAMVNAEIQAMHENLHMNDDGAECQSQLGIQSYTL LEPEDSEALVGYFKRRTIEQGMFYWDVLVEDGRMTNFFWRDGRSRVDYDCFGDVVVFDTA YRTSKYNMICAPFVGVNHHGQDVMLGCALLLDESLTSYEWLFKSFLDSMGGHPPKTIFTV MAETISKAIEGVLPETRHCICQWSIEKNLQSHLGTLNVSGTFHSMLTKCMRECESEAEFE ETWAMMLNECNMQDDQWLSDLYQQRRKWSTVHHRDAFDGGINSLDRSDSSNNVLSSIANE STSPTQFILDFDKLVGSWRTNESAEDIQCTQTSPESRVKHRSILEHAAEVYTRKVYKSLE TEYLDGCSATSYQEMQCSETLYRFEFILQRSGPKVQVVFLDTSTMELSCTCKKFETTGIL CSHAINALDLKNFDRIPERYVLKRWKKYVRKGTYLFPSDEFVGQDCTEPGLAFRNKAMRF VYDLLMKSKGHQDTRKLILDVFENGEKLVESLCELKRLNAHASGREKDGSKVEKRKKKSA KQEKSSRNVKQAVSSQTADTVLVDPPNQNQYFATEDMATNSSIGRPFFYQGFPSAGVSTS QIQGHTNIHSVPQCAPQEYSAYGAAHPPPTFGGGRNF

Transcript Sequence

Transcript ID	Os12t0160900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:3059460:3063694:1 gene:Os12g0160900 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAR1 domain containing protein. (Os12t0160900-01)
Sequence	GCATTTCCTCACCCACCCATCGCCTCCTCTCCGCCGCCGCCGCCTCGTCGCCGTTGACGC CGCCGCCCGCCACCGCACCGCCGCCTCTCTCCCCCCCTCTCCCCTCCGCGCGCTCCCTGC CACTGCGCCCCCCTCTCTCCCGCGCCGCGCGCCACGGGCTGCAAGAGGGAGAGGGCGAGG CGAGGTGGCCCCTCCTCCGGCCGCCGCCGCGCTCTCTCTCTCACTCGCCGTGCTGTTGGG CGAGTTACTTGCTCCCTGGGAGGTGGCTCTCCCCCCTCCAGGATCCTCTCCGGCGGCTGC CGGCACGCTTCTCTCTCGTGTGCTAGATTTCCGTGAGCTGGTGGTTCGGAAGCCCTAACG TTAGCTTGGTTGGAATTCTCCGGGCAAGCTCTGTTCTTCACGTAATGGAAGAAACTAGCA TTGCTATTGAGATTGATGGGGAGGCGATCTGTCTGGACAGTGTAGGAGATAATGAGGAGC AAGGAACTCAGGAGAACCAAGAGATACAAATAATTTATGATGCTGAAAATGAGGGACAAG TTGCTTTCGACAATGGAGAACAGGGAAAGGAGGAACATCCCATGAGGAATGAAGAGGAGA ACCAGGAAAATATTCCTGTAATTCCAAGCCGTGAGGAGTTGACTGAAGAATTGCGGAACA AAATTGCCAATAGTGAAGAAGAAGCTTACAGGCTGTACTGTGACTATGGACATCGTATGG GCTTTAGTGTGAGGAAGGGGAAACAGTACTACTTTACAGGGACCAAAACTATTCGTACAA AAGACTATTACTGCTCAAAGGAAGGTCTAAAGGACGATGAGCAGCTTACTGAGGCAAACT TTAATAAGCCAGACACCAGAACTAACTGTAAAGCAATGGTCCGTTATAGAGTTGATTCGG AAGGCCATTGGCGAGTTATTCAGATTGTTCCTGAACATAACCATGAGTTGGTTCGACCTG AAGAGGTACACTTGCTGAGATCAGTGAGGACTCTTTCAATTCCTAAGCCCGGTGTGCTGA ATGCAATGGTAAATGCTGAAATACAAGCAATGCATGAAAATTTGCACATGAATGATGATG GTGCTGAATGTCAGAGTCAGCTTGGCATCCAAAGTTACACTCTGCTTGAACCAGAGGACT CTGAGGCACTTGTAGGTTATTTCAAGCGTAGAACAATTGAACAAGGTATGTTCTACTGGG ATGTGCTGGTAGAGGATGGCCGAATGACAAATTTTTTTTGGAGGGATGGAAGAAGCCGTG TTGATTACGACTGTTTTGGAGATGTCGTGGTGTTTGACACAGCATATCGTACCAGCAAAT ATAATATGATTTGTGCCCCATTTGTTGGTGTTAATCACCATGGCCAAGATGTTATGCTTG GTTGTGCACTTCTGTTAGATGAGTCCCTGACATCCTATGAATGGTTGTTCAAGTCATTCT TAGATTCAATGGGTGGCCATCCTCCTAAAACAATTTTCACTGTTATGGCTGAAACTATAT CCAAGGCAATTGAAGGCGTTCTCCCTGAGACACGTCACTGCATCTGTCAATGGAGTATTG AAAAGAACCTACAGTCCCATTTAGGCACTCTAAATGTTTCTGGAACATTTCATAGCATGT TGACAAAATGCATGAGAGAATGTGAGTCAGAAGCAGAGTTTGAGGAAACATGGGCAATGA TGCTTAACGAATGCAATATGCAGGATGACCAATGGCTCTCTGATCTGTATCAGCAGAGGC GTAAATGGTCCACAGTTCATCACAGGGATGCATTTGATGGTGGAATCAATTCACTCGATA GGAGTGATAGTTCAAACAATGTCCTGAGCAGCATTGCTAATGAATCAACTTCACCCACTC AATTTATTCTTGACTTTGATAAATTGGTAGGGAGTTGGCGTACAAATGAATCCGCCGAGG ACATTCAGTGCACCCAGACATCCCCAGAATCTAGAGTTAAGCATAGGAGTATTTTGGAGC ATGCTGCTGAAGTTTATACGCGCAAAGTCTATAAATCTCTTGAAACAGAATATCTAGATG GATGCAGTGCAACTTCATACCAGGAAATGCAGTGTAGTGAAACATTGTACCGGTTTGAGT TCATTTTGCAAAGAAGTGGCCCAAAAGTTCAGGTAGTTTTTCTTGACACCTCTACCATGG AATTGAGCTGTACTTGTAAAAAATTTGAGACAACAGGCATACTTTGTTCGCATGCAATAA ATGCACTTGATCTCAAGAATTTTGATAGAATTCCTGAAAGGTATGTTTTAAAACGGTGGA AAAAGTATGTTAGGAAAGGAACATATCTATTTCCATCTGATGAGTTTGTGGGACAAGATT GCACAGAACCTGGGCTTGCATTTCGTAACAAAGCAATGCGATTTGTGTATGATCTGTTGA TGAAGAGCAAAGGTCATCAGGATACGAGGAAACTTATTCTGGATGTGTTTGAAAATGGAG AAAAATTAGTAGAAAGCCTATGTGAACTCAAGAGATTGAATGCCCATGCCTCTGGAAGAG AGAAAGATGGAAGTAAGGTTGAAAAGCGGAAGAAAAAATCAGCCAAGCAAGAAAAAAGCT CAAGAAATGTTAAACAAGCAGTTTCATCTCAGACAGCTGACACAGTTTTAGTTGATCCAC CAAATCAAAATCAATATTTTGCAACAGAAGATATGGCAACAAACTCATCTATCGGTAGAC CTTTCTTCTACCAGGGGTTTCCTTCTGCTGGTGTTTCAACAAGTCAGATTCAGGGGCATA CGAATATTCATTCTGTGCCTCAGTGTGCACCACAGGAATATTCAGCCTATGGCGCAGCTC ATCCTCCTCCAACATTTGGTGGTGGAAGAAATTTCTGAAGAATGTAGAGCATTGATGTGT GAATAGCTGAAGTTCATATTCTTTGACATATTGTTGTATGTGCATGGTCTAATCGAACGA TTTTGCTAGGCAGTAGTCACCTTACCTAGCAGCAATAGAAGTAGGCCTCTCCTTATTGTA TAAATTATTGAATTTGCTAATTGTTGTACTAGTTGTAAATTTGCTATTCACTAGTTGCAT GAAGTAAAAAAATATTGTGCTGTAGGG