Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0157200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:2851827:2856262:-1 gene:Os12g0157200 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os12t0157200-01)
Sequence	ATGGGCAACGCGCAGGCTTCCGCCTCCTCCACCAGCTCCCCCCGCTTCTCCATGGCGTCC AGGGCCTTCTCGAGGCAGGAGCTGGACGACCTCCGCGCGCTGTTCGTCTCGCTGGCGGCG CAGTCGCAGACCGGCGGCCGTGCCATCTCCCGCCCCGTCTTCCTCGAGTATTTCGGGATA CGTGGGGCGCTCGGGGATCGGCTGTTCCAGCTGGTGGCGAGGGAGAGCGGCGGGGGTGAG GGGGTCACCTTCGAGGACTTGATCGTCTCCAAAGCAACATACGAGAGAGGAACTCGAGAT GAAGTTGATGAATTCATTTATCAACTATGTGATGTTACAGGAGATGAAGTCTTAGAAAGG TCTGATCTGGAAACTATCTTGGCATCTATTCGTGAAACCATATTTTCAGAAAATAAGGAA GCTGGGGAAGGCTCAAACAAGAGGACATTTGAAGCATTTATCAACTCTGCAGTATTTTCG AAGGATGCTGAAGGAGTCGCAAGGAAGTCTATGTCGCTATCAGACTTTAGGAGCTGGTGC ATTCTCATTCCATCCTTGAGGAAGTTCCTTGGAAGTTTGTTGATGCCTCCTGATTCAGGC AGACCAGGCTTCCAAGTACCAGCGCTTCATTACCTAGAAAACATCTCCCCAGATTTGCTA CTTTTAAATAAAGAGTATGCTTGGCATATTGGAGGTGGTTTTTCACAACAGGAGGTGCAA GAATGGAGGCTTCTATATCACAGTTCTCTTCATGGACAAAGCTTCAACACTTTCTTAGGC AATGTAACGAATGGAGATGCACAGACTGTTATCATCGTTAAAGATACTGAAGGATTTGTT TTTGGTGGATACGCATCACATCCTTGGGAAAGGCACAGTGATTTTTATGGTGATATGAAA ACATTCCTGTTCAAGTTATATCCTGAAGCATCCATTTTCCGCCCTACAGGAGGGAACAGA AACCTCCAATGGTGTGCCGTGAACTTCAGCTCTGACTCCATTCCAAATGGCATTGGCTTT GGAGGGCAGCCGCATCACTTCGGTTTTTTCCTATCCGCAAATTTTGATCAAGGGCACTCA TTTACATGTACCACATTCACCAGTCCTGCCCTTTCAAAGACAAATAGGTTCAGGCCAGAG GTAATTGAATGTTGGGGCATACAAACGAAGGGGGCACTTGATGAAAAGGCAGAGCTTGTC AAGGGGACAGTCCTAGAGAGATTCAAGGAGGATCGGAACATGCTGAAGCTGGTTGGTTTG GCGAACGCGAGTGATTGA

Peptide Sequence

PEP ID	Os12t0157200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:2851827:2856262:-1 gene:Os12g0157200 transcript:Os12t0157200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os12t0157200-01)
Sequence	MGNAQASASSTSSPRFSMASRAFSRQELDDLRALFVSLAAQSQTGGRAISRPVFLEYFGI RGALGDRLFQLVARESGGGEGVTFEDLIVSKATYERGTRDEVDEFIYQLCDVTGDEVLER SDLETILASIRETIFSENKEAGEGSNKRTFEAFINSAVFSKDAEGVARKSMSLSDFRSWC ILIPSLRKFLGSLLMPPDSGRPGFQVPALHYLENISPDLLLLNKEYAWHIGGGFSQQEVQ EWRLLYHSSLHGQSFNTFLGNVTNGDAQTVIIVKDTEGFVFGGYASHPWERHSDFYGDMK TFLFKLYPEASIFRPTGGNRNLQWCAVNFSSDSIPNGIGFGGQPHHFGFFLSANFDQGHS FTCTTFTSPALSKTNRFRPEVIECWGIQTKGALDEKAELVKGTVLERFKEDRNMLKLVGL ANASD

Transcript Sequence

Transcript ID	Os12t0157200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:2851827:2856262:-1 gene:Os12g0157200 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os12t0157200-01)
Sequence	GGCGGGCCGCGCAGCTGCTGCACTCCAACTCTCCAAGAGAGAAGGAATCGCGACTTCGCC GCCGCGGCCGCAACACCGACTTCGCCGGCGGCGGCGGCGATGGGCAACGCGCAGGCTTCC GCCTCCTCCACCAGCTCCCCCCGCTTCTCCATGGCGTCCAGGGCCTTCTCGAGGCAGGAG CTGGACGACCTCCGCGCGCTGTTCGTCTCGCTGGCGGCGCAGTCGCAGACCGGCGGCCGT GCCATCTCCCGCCCCGTCTTCCTCGAGTATTTCGGGATACGTGGGGCGCTCGGGGATCGG CTGTTCCAGCTGGTGGCGAGGGAGAGCGGCGGGGGTGAGGGGGTCACCTTCGAGGACTTG ATCGTCTCCAAAGCAACATACGAGAGAGGAACTCGAGATGAAGTTGATGAATTCATTTAT CAACTATGTGATGTTACAGGAGATGAAGTCTTAGAAAGGTCTGATCTGGAAACTATCTTG GCATCTATTCGTGAAACCATATTTTCAGAAAATAAGGAAGCTGGGGAAGGCTCAAACAAG AGGACATTTGAAGCATTTATCAACTCTGCAGTATTTTCGAAGGATGCTGAAGGAGTCGCA AGGAAGTCTATGTCGCTATCAGACTTTAGGAGCTGGTGCATTCTCATTCCATCCTTGAGG AAGTTCCTTGGAAGTTTGTTGATGCCTCCTGATTCAGGCAGACCAGGCTTCCAAGTACCA GCGCTTCATTACCTAGAAAACATCTCCCCAGATTTGCTACTTTTAAATAAAGAGTATGCT TGGCATATTGGAGGTGGTTTTTCACAACAGGAGGTGCAAGAATGGAGGCTTCTATATCAC AGTTCTCTTCATGGACAAAGCTTCAACACTTTCTTAGGCAATGTAACGAATGGAGATGCA CAGACTGTTATCATCGTTAAAGATACTGAAGGATTTGTTTTTGGTGGATACGCATCACAT CCTTGGGAAAGGCACAGTGATTTTTATGGTGATATGAAAACATTCCTGTTCAAGTTATAT CCTGAAGCATCCATTTTCCGCCCTACAGGAGGGAACAGAAACCTCCAATGGTGTGCCGTG AACTTCAGCTCTGACTCCATTCCAAATGGCATTGGCTTTGGAGGGCAGCCGCATCACTTC GGTTTTTTCCTATCCGCAAATTTTGATCAAGGGCACTCATTTACATGTACCACATTCACC AGTCCTGCCCTTTCAAAGACAAATAGGTTCAGGCCAGAGGTAATTGAATGTTGGGGCATA CAAACGAAGGGGGCACTTGATGAAAAGGCAGAGCTTGTCAAGGGGACAGTCCTAGAGAGA TTCAAGGAGGATCGGAACATGCTGAAGCTGGTTGGTTTGGCGAACGCGAGTGATTGACAG CTGAAAGAGGATCACCACGGCAAATTCCTGAGGACCCTGTACAGCACAATTTTACAGAAG AAGATAGATCCTTATATACGATTGTCACTGCTGAACTGAGCTTTATGAAACTTGTTTAGC TGCAAGTTGGTCTGTACTGTGTGTTGTGGCTGTATTAGATCAACTTCAATGCCGAATTCG AGATATGATGAGAGAGAAACTGACTGTATTTTGAAACATTGTCTATTTGTTTGTTAATAT AAATGTTGACTGCTGAATATAGATGTATGACATGTACTTTAATAAAAAGATACTCCCTTC ATTTCT