Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0155100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:2705806:2706749:-1 gene:Os12g0155100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3049 domain containing protein. (Os12t0155100-01)
Sequence

ATGGCGGCGGACGGCGGCGCGCTGAGGCGGCTGTTCGAGAAGCCGCTGCCGGTGCCGGAG
AACCCGACGCTGCTGGAGGCGCTGTCGGCGTGCAACCATGTGCACCACCGCAAGAAGCTC
GTCGACACGGCCTCCTTCACCGAGATCTTCGGCGAGCTCCACTTCCAGGAGAAGCCGGTG
GACGTCGCCGCCGCCGCCCGGTTCCTGCCGCCGCCGCCGCCGCCTGTTCGCGCGGCGTCG
TGGATCGACGTCGCCGACGACAAGAGCAAGGACGGCTCGTCCCTGGACGCGCTGCTCCGG
CCGAAGTCGTCCGCCGTCAAGAGGAGCGCCAGCTTCTGCCTCAAGAGCTCCGAGTCGTCG
CTGCTGCTCTGCACCGAGGGGCTCGGGACGGAGAGCACGGTGGACGCCGACGACATGGTC
AAGGACGGCGACGGCGACGGCGAGGCCATCCGCCGTGGCGAGGAGGAGACGGACGGCGTG
GAGGAGGACGACGGCGCGGGGAGGGAGAAGCGGGGCACGCCGACGCTGGCACCGACGCCG
CCGACGTTCCCGCCGCCGATACGGTCGATCGGGCGCGGCGGGAAGCCGTGCGTGTGCTTC
CGGTCGTTCCGGGCGGAGGGGAGGTTCGTGCTGATGGAGGTGGTGATCCCCGGGAAGGAG
CTCCTGCAGGCGACGCGCGAGGGCGGTCGCCTCACGCTGCGCTTCGCCAACGCCGCGGCC
GTGGGCGGCGGCGGCGAAGCAGACGACGATGTCAACGACGACGACGTCGATGGCGGCGAG
ACCAAGAATGCATGCGCAGCAAGAGATGATATGCTAGCTAATAACTGCACTTGTTAA

Peptide Sequence

PEP ID

Os12t0155100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:2705806:2706749:-1 gene:Os12g0155100 transcript:Os12t0155100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3049 domain containing protein. (Os12t0155100-01)
Sequence

MAADGGALRRLFEKPLPVPENPTLLEALSACNHVHHRKKLVDTASFTEIFGELHFQEKPV
DVAAAARFLPPPPPPVRAASWIDVADDKSKDGSSLDALLRPKSSAVKRSASFCLKSSESS
LLLCTEGLGTESTVDADDMVKDGDGDGEAIRRGEEETDGVEEDDGAGREKRGTPTLAPTP
PTFPPPIRSIGRGGKPCVCFRSFRAEGRFVLMEVVIPGKELLQATREGGRLTLRFANAAA
VGGGGEADDDVNDDDVDGGETKNACAARDDMLANNCTC

Transcript Sequence

Transcript ID

Os12t0155100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2705806:2706749:-1 gene:Os12g0155100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3049 domain containing protein. (Os12t0155100-01)
Sequence

ATATCTTTTTTGCCGGTGCAAAGCTTTGGTTCTTGGCCGGTGGCGGCGGCGCGCATGGCG
GCGGACGGCGGCGCGCTGAGGCGGCTGTTCGAGAAGCCGCTGCCGGTGCCGGAGAACCCG
ACGCTGCTGGAGGCGCTGTCGGCGTGCAACCATGTGCACCACCGCAAGAAGCTCGTCGAC
ACGGCCTCCTTCACCGAGATCTTCGGCGAGCTCCACTTCCAGGAGAAGCCGGTGGACGTC
GCCGCCGCCGCCCGGTTCCTGCCGCCGCCGCCGCCGCCTGTTCGCGCGGCGTCGTGGATC
GACGTCGCCGACGACAAGAGCAAGGACGGCTCGTCCCTGGACGCGCTGCTCCGGCCGAAG
TCGTCCGCCGTCAAGAGGAGCGCCAGCTTCTGCCTCAAGAGCTCCGAGTCGTCGCTGCTG
CTCTGCACCGAGGGGCTCGGGACGGAGAGCACGGTGGACGCCGACGACATGGTCAAGGAC
GGCGACGGCGACGGCGAGGCCATCCGCCGTGGCGAGGAGGAGACGGACGGCGTGGAGGAG
GACGACGGCGCGGGGAGGGAGAAGCGGGGCACGCCGACGCTGGCACCGACGCCGCCGACG
TTCCCGCCGCCGATACGGTCGATCGGGCGCGGCGGGAAGCCGTGCGTGTGCTTCCGGTCG
TTCCGGGCGGAGGGGAGGTTCGTGCTGATGGAGGTGGTGATCCCCGGGAAGGAGCTCCTG
CAGGCGACGCGCGAGGGCGGTCGCCTCACGCTGCGCTTCGCCAACGCCGCGGCCGTGGGC
GGCGGCGGCGAAGCAGACGACGATGTCAACGACGACGACGTCGATGGCGGCGAGACCAAG
AATGCATGCGCAGCAAGAGATGATATGCTAGCTAATAACTGCACTTGTTAATTAAGAATT
TAAGATGGCTGCAAGTTGCAACGAAGAACTTGATGCTTTTGAAT