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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0154900-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:2696407:2697214:-1 gene:Os12g0154900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 12-3 description:Germin-like protein 12-3, Disease resistance (Os12t0154900-00)
Sequence

ATGGCCTCCTCCAACTTTTTTCTTCTCATACCTCTCATCGCTTTGGTCACTACTCAGGCC
ATGGCTTCTGATCCTAGTCCTCTTCAGGACCTCTGTGTTGCCGACAAGAACTCACCAGTG
CGTGTCAATGGGTTCCCTTGCAAGGATGCTAAGGATGTGAGTGTCGATGACTTCTTCCTA
GCAGCTAACCTCGACAAGCCGATGGACATAACCAAGAGCAAGGCTGGATCCAACGTTACC
TTAATCAATGTGATGAAACTTGCAGGTCTCAACACCCTTGGTATCTCCATGGCGAGGATC
GACTATGCTCCTAAAGGACAAAACCCACCCCACACACACCCTCGTGCCACTGAGATCCTA
AGTGTAATTGAGGGCTCACTTTATGTTGGATTTGTTACATCTAACCAAGCAAACGGAGAA
AACAAGCTCTTCACCAAGACACTCAACAAAGGAGATGTCTTTGTGTTCCCAGAGGGTCTC
ATTCACTTCCAGTTCAATCCAAGTTATGATAAGCCGGCAGCTGCTATCGTTGCACTTAGT
AGCCAAAACCCTGGGGCGATTACCATTGCTAATGCAGTATTTGGATCAAATCCACCAATC
TCGGATGATGTTCTTGCTAAGGCATTTCAAGTGGACAAAAAGGCAGTGGATTGGCTACAA
GCTCAATTTTGGGAGAATAACCATAACTAA

Peptide Sequence

PEP ID

Os12t0154900-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:2696407:2697214:-1 gene:Os12g0154900 transcript:Os12t0154900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 12-3 description:Germin-like protein 12-3, Disease resistance (Os12t0154900-00)
Sequence

MASSNFFLLIPLIALVTTQAMASDPSPLQDLCVADKNSPVRVNGFPCKDAKDVSVDDFFL
AANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEIL
SVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALS
SQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQFWENNHN

Transcript Sequence

Transcript ID

Os12t0154900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2696407:2697214:-1 gene:Os12g0154900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 12-3 description:Germin-like protein 12-3, Disease resistance (Os12t0154900-00)
Sequence

ATGGCCTCCTCCAACTTTTTTCTTCTCATACCTCTCATCGCTTTGGTCACTACTCAGGCC
ATGGCTTCTGATCCTAGTCCTCTTCAGGACCTCTGTGTTGCCGACAAGAACTCACCAGTG
CGTGTCAATGGGTTCCCTTGCAAGGATGCTAAGGATGTGAGTGTCGATGACTTCTTCCTA
GCAGCTAACCTCGACAAGCCGATGGACATAACCAAGAGCAAGGCTGGATCCAACGTTACC
TTAATCAATGTGATGAAACTTGCAGGTCTCAACACCCTTGGTATCTCCATGGCGAGGATC
GACTATGCTCCTAAAGGACAAAACCCACCCCACACACACCCTCGTGCCACTGAGATCCTA
AGTGTAATTGAGGGCTCACTTTATGTTGGATTTGTTACATCTAACCAAGCAAACGGAGAA
AACAAGCTCTTCACCAAGACACTCAACAAAGGAGATGTCTTTGTGTTCCCAGAGGGTCTC
ATTCACTTCCAGTTCAATCCAAGTTATGATAAGCCGGCAGCTGCTATCGTTGCACTTAGT
AGCCAAAACCCTGGGGCGATTACCATTGCTAATGCAGTATTTGGATCAAATCCACCAATC
TCGGATGATGTTCTTGCTAAGGCATTTCAAGTGGACAAAAAGGCAGTGGATTGGCTACAA
GCTCAATTTTGGGAGAATAACCATAACTAA