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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0154700-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:2688759:2689826:-1 gene:Os12g0154700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 12-1 description:Germin-like protein 12-1, Disease resistance (Os12t0154700-01)
Sequence

ATGGCCTCCTCCAACTTCTTTCTTCCCACAGCTCTCATCGCTTTGGTCGCTACTCAGGCC
ATGGCTTTTGATCCCAGTCCTCTTCAGGACTTCTGCGTTGCCGACAGGAACTCTCCAGTA
CGTGTCAATGGGTTCCCCTGCAAGGATGCTAAGGATGTGAATGTTGATGACTTCTTCCTA
GAAGCTAACCTCGACAAGCCGATGGACACAACCAAGAGCAAGGCTGGATCCAATGTTACA
TTGATCAACGTGATGAAACTCACAGGTCTCAACACCCTTGGCATCTCCATGGCAAGGATC
GACTATGCTCCTAAAGGGCAAAACCCACCACACACGCATCCCCGTGCTACCGAGATCCTA
ACGGTTTTTGAGGGTACACTCTATGTTGGTTTTGTTACATCGAACCAAGCAAACGGAGAA
AACAAGCTATTCACCAAGACACTTAACAAGGGTGATGTCTTCGTGTTCCCACAAGGTCTC
ATTCACTTCCAGTTCAATCCAAGCTATGATAAGCCAGCAGTTGCCATCGCTGCACTTAGC
AGCCAGAATCCTGGAGCGATTACCATTGCTAATGCAGTATTTGGATCAAATCCACCAATC
TCGGATGATGTTCTTGCTAAGGCATTTCAAGTGGATAAGAAGGCCGTGGATTGGCTCCAA
GCTCAATTCTGGGAGAACAACCACAACTAA

Peptide Sequence

PEP ID

Os12t0154700-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:2688759:2689826:-1 gene:Os12g0154700 transcript:Os12t0154700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 12-1 description:Germin-like protein 12-1, Disease resistance (Os12t0154700-01)
Sequence

MASSNFFLPTALIALVATQAMAFDPSPLQDFCVADRNSPVRVNGFPCKDAKDVNVDDFFL
EANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEIL
TVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALS
SQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQFWENNHN

Transcript Sequence

Transcript ID

Os12t0154700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2688759:2689826:-1 gene:Os12g0154700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 12-1 description:Germin-like protein 12-1, Disease resistance (Os12t0154700-01)
Sequence

ATCAACTATAGCTATACAAGAATCATCGACCACTACTTGTACACAAGCAAAAGTTCCATC
AACTTAACATGGCCTCCTCCAACTTCTTTCTTCCCACAGCTCTCATCGCTTTGGTCGCTA
CTCAGGCCATGGCTTTTGATCCCAGTCCTCTTCAGGACTTCTGCGTTGCCGACAGGAACT
CTCCAGTACGTGTCAATGGGTTCCCCTGCAAGGATGCTAAGGATGTGAATGTTGATGACT
TCTTCCTAGAAGCTAACCTCGACAAGCCGATGGACACAACCAAGAGCAAGGCTGGATCCA
ATGTTACATTGATCAACGTGATGAAACTCACAGGTCTCAACACCCTTGGCATCTCCATGG
CAAGGATCGACTATGCTCCTAAAGGGCAAAACCCACCACACACGCATCCCCGTGCTACCG
AGATCCTAACGGTTTTTGAGGGTACACTCTATGTTGGTTTTGTTACATCGAACCAAGCAA
ACGGAGAAAACAAGCTATTCACCAAGACACTTAACAAGGGTGATGTCTTCGTGTTCCCAC
AAGGTCTCATTCACTTCCAGTTCAATCCAAGCTATGATAAGCCAGCAGTTGCCATCGCTG
CACTTAGCAGCCAGAATCCTGGAGCGATTACCATTGCTAATGCAGTATTTGGATCAAATC
CACCAATCTCGGATGATGTTCTTGCTAAGGCATTTCAAGTGGATAAGAAGGCCGTGGATT
GGCTCCAAGCTCAATTCTGGGAGAACAACCACAACTAAATTATTGATGCTTGATAAGGCT
CAAAATTAGTGATTGCTAGTAAAAATGTTTTGTTGATTGTTGTTAGCTAAATATTGTATA
CTGTATAACACTACGCATCAATAATGTATAACACTACGCACATATATATGTTACAAGATG
TATGATCTATGGAATTACTTTAATATATTTGATTTCTTGGTACTTTTT