Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0153500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:2643975:2645314:1 gene:Os12g0153500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 11 description:Carbonic anhydrase, CAH1-like domain containing protein. (Os12t0153500-01)
Sequence

ATGGTGTCTCTCCGCGCGGCCATCGTCCTCGTCGTCGCCGCCTCGTCGGTCGCCGTCGCC
TTCTCTCATGCGGAAGGGAACGAGGGGCCGGACTTCACCTACATCGAAGGCGCCATGGAC
GGGCCGTCGAACTGGGGGAAGCTGAGCCCGGAGTACAGGATGTGCGGCGAGGGGAGGTCG
CAGTCGCCGATCGACATCAACACCAAGACCGTCGTCCCGCGCTCGGACCTCGACACGCTG
GACCGCAACTACAACGCCGTGAACGCCACCATCGTCAACAACGGCAAGGACATCACCATG
AAGTTCCACGGCGAGGTCGGCCAGGTGATCATCGCCGGGAAGCCGTACAGGTTCCAGGCG
ATCCACTGGCACGCGCCGTCGGAGCACACCATCAACGGCAGGCGCTTCCCGCTCGAGCTC
CACCTCGTCCACAAGTCCGACGCCGACGGCGGCCTCGCCGTCATCTCCGTCCTCTACAAG
CTCGGCGCCCCGGACTCCTTCTACCTCCAGTTCAAGGACCACCTCGCCGAGCTCGGCGCC
GACGAGTGCGACTTCAGCAAGGAGGAGGCCCACGTCGCCGCCGGGCTGGTGCAGATGAGG
TCGCTGCAGAAGCGCACGGGGAGCTACTTCCGGTACGGCGGCTCGCTGACGACGCCGCCG
TGCGGCGAGAACGTGGTGTGGAGCGTGCTCGGGAAGGTGAGGGAGATCAGCCAGGAGCAG
CTGCACCTGCTCATGTCGCCATTGCCGACCAAGGACGCCAGGCCGGCGCAGCCGCTCAAT
GGCAGGGCCGTCTTCTACTACAACCCGCCGGGCAGCGCCGTCTCCTTCCAGGAATTCGCC
AAGTGA

Peptide Sequence

PEP ID

Os12t0153500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:2643975:2645314:1 gene:Os12g0153500 transcript:Os12t0153500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 11 description:Carbonic anhydrase, CAH1-like domain containing protein. (Os12t0153500-01)
Sequence

MVSLRAAIVLVVAASSVAVAFSHAEGNEGPDFTYIEGAMDGPSNWGKLSPEYRMCGEGRS
QSPIDINTKTVVPRSDLDTLDRNYNAVNATIVNNGKDITMKFHGEVGQVIIAGKPYRFQA
IHWHAPSEHTINGRRFPLELHLVHKSDADGGLAVISVLYKLGAPDSFYLQFKDHLAELGA
DECDFSKEEAHVAAGLVQMRSLQKRTGSYFRYGGSLTTPPCGENVVWSVLGKVREISQEQ
LHLLMSPLPTKDARPAQPLNGRAVFYYNPPGSAVSFQEFAK

Transcript Sequence

Transcript ID

Os12t0153500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2643975:2645314:1 gene:Os12g0153500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 11 description:Carbonic anhydrase, CAH1-like domain containing protein. (Os12t0153500-01)
Sequence

GTTGAGATTTCAGACAATTAACATCACTAGGAGAGAAATCAAGAAACAAGCTAGCCAGCA
ATGGTGTCTCTCCGCGCGGCCATCGTCCTCGTCGTCGCCGCCTCGTCGGTCGCCGTCGCC
TTCTCTCATGCGGAAGGGAACGAGGGGCCGGACTTCACCTACATCGAAGGCGCCATGGAC
GGGCCGTCGAACTGGGGGAAGCTGAGCCCGGAGTACAGGATGTGCGGCGAGGGGAGGTCG
CAGTCGCCGATCGACATCAACACCAAGACCGTCGTCCCGCGCTCGGACCTCGACACGCTG
GACCGCAACTACAACGCCGTGAACGCCACCATCGTCAACAACGGCAAGGACATCACCATG
AAGTTCCACGGCGAGGTCGGCCAGGTGATCATCGCCGGGAAGCCGTACAGGTTCCAGGCG
ATCCACTGGCACGCGCCGTCGGAGCACACCATCAACGGCAGGCGCTTCCCGCTCGAGCTC
CACCTCGTCCACAAGTCCGACGCCGACGGCGGCCTCGCCGTCATCTCCGTCCTCTACAAG
CTCGGCGCCCCGGACTCCTTCTACCTCCAGTTCAAGGACCACCTCGCCGAGCTCGGCGCC
GACGAGTGCGACTTCAGCAAGGAGGAGGCCCACGTCGCCGCCGGGCTGGTGCAGATGAGG
TCGCTGCAGAAGCGCACGGGGAGCTACTTCCGGTACGGCGGCTCGCTGACGACGCCGCCG
TGCGGCGAGAACGTGGTGTGGAGCGTGCTCGGGAAGGTGAGGGAGATCAGCCAGGAGCAG
CTGCACCTGCTCATGTCGCCATTGCCGACCAAGGACGCCAGGCCGGCGCAGCCGCTCAAT
GGCAGGGCCGTCTTCTACTACAACCCGCCGGGCAGCGCCGTCTCCTTCCAGGAATTCGCC
AAGTGATTCTTTCTTTTTTTTTTCTTTCTTTTTTTTTTGGTTTTTTGTATTTGATGTTGA
GTTGATTTGATTAACATTTCGACGTATGATATGCACTATATATAATTAATTAACATCGCA
AAATACTTTTTTTTTCGAGAATACATAAAGGGCTCGCGTATCTTTGTATTAACTAGTGGG
GGTGGGGATTAATTACTATATGCTTGGACATTTTTCCGTTCTTCAAGATTGACGCATCGA
TCGATAAATGTATATATTTGTAGCTAAGAAGGGGTAAATATACTAGGAGAGAATACACTC
TATTGTCATTGAGTTTGTCTCTGTCAACGATTTGCTACTGACATTGTATGTTTCT