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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0153200-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:2622160:2623105:-1 gene:Os12g0153200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0153200-01)
Sequence

ATGGGGAATTGCATGGTGATTCAAGATAGGAACAGGGAGATCAAGATCATGAGCATGGAC
GTCGACGGCGAGATCCTGAAGCTGCCGCCGCCGCCGCCACCCCTCAACGGCGTCTCCTCC
GACGACGACGACGAGGCACTCCGGCCGGCGACGGCCGACATGGCTGACGACCCACCCGGC
GGCGCCGTCGTGAGGGTGAAGCTGGTGGTCAGAAAGCAGGAGCTGAAGAAGATGCTGCTG
CACAACGACGCCGCCGCCATCTCCCTGAACGACATGGTGTCTCTCATGCAAAAACAAGCT
GAAGCAGATGAGCTGCTGCACCAGCAGGAGAGCTGCGGATCAGTGTGGCAGCCTACCCTG
CAGAGCATACCTGAAGGCAGCGTTTTCTAG

Peptide Sequence

PEP ID

Os12t0153200-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:2622160:2623105:-1 gene:Os12g0153200 transcript:Os12t0153200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0153200-01)
Sequence

MGNCMVIQDRNREIKIMSMDVDGEILKLPPPPPPLNGVSSDDDDEALRPATADMADDPPG
GAVVRVKLVVRKQELKKMLLHNDAAAISLNDMVSLMQKQAEADELLHQQESCGSVWQPTL
QSIPEGSVF

Transcript Sequence

Transcript ID

Os12t0153200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2622160:2623105:-1 gene:Os12g0153200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0153200-01)
Sequence

AAGCAAAGCTCACTTGGCTAGTCCAATGGCACAGAGATGAAGTATGCTCCAAAGTTTGTG
GCTATCCTCCTAATACAATTCCTTTAAATACCACACATAACTCCTCCCCTCCAACCCCCT
ACTCTTTCGCCAAGAAATACTACACCACACACACATTTCTAACTTGTGAATTGTGATCGA
TCGATCATTCGGTCGTGCTAGCTACCTCGTAATTTCATCATCCCAAATCTCCTTGCAAAA
CTCGTCTTCGTCGTCGTATCATCATGGGGAATTGCATGGTGATTCAAGATAGGAACAGGG
AGATCAAGATCATGAGCATGGACGTCGACGGCGAGATCCTGAAGCTGCCGCCGCCGCCGC
CACCCCTCAACGGCGTCTCCTCCGACGACGACGACGAGGCACTCCGGCCGGCGACGGCCG
ACATGGCTGACGACCCACCCGGCGGCGCCGTCGTGAGGGTGAAGCTGGTGGTCAGAAAGC
AGGAGCTGAAGAAGATGCTGCTGCACAACGACGCCGCCGCCATCTCCCTGAACGACATGG
TGTCTCTCATGCAAAAACAAGCTGAAGCAGATGAGCTGCTGCACCAGCAGGAGAGCTGCG
GATCAGTGTGGCAGCCTACCCTGCAGAGCATACCTGAAGGCAGCGTTTTCTAGCTGCATG
CAGAACAAAGAATGATGCATGCATGAATTTACCATTTTGGATCTCTTGAATAAGTTTATG
TATGTATTCATGGACAACAAGAGCAGTCCTAGCTTATATATGTATATTAGAGAGAGATAG
AGGGGTATATAATAGCTAGATTGATAAGGAATTTTGAGGCAAGGATTCTCTTTGTCTTTT
CTTCTTGATTAAACATATGCATGTAAGAAGGGGTAAAGATGGTCCTGGAAATCAAGCAAG
ATGATAGTTTTATCATGCCTTCGTTCATGCATGAGAGATTATGACT