Plant GARDEN How To ▶︎

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Oryza sativa

CDS Sequence

CDS ID

Os12t0152600-01

CDS Infomation

cds chromosome:IRGSP-1.0:12:2592552:2594898:-1 gene:Os12g0152600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os12t0152600-01)

Sequence

ATGCTCTTCTCCATCCACCCCTGCAAATCCCAAGCTCCTGCCGCATCCGCCGCCGCCGCC
GCCATCTCCGGCCTCCGCTTCGTCTCCTCGTCGTCGTCGTCGTCGTCGACGGCGCTGATT
CCCCCGCCTCGGACAGAGGAGAGCCCGTTCGCGTCGCTGCTCGCGTCTGATCCCCCACCA
CCCGAGGCGCTCCGAGAGGTGCTCGCCGCTGGCGACGTCCACGCCGCGCTCCGCGGCCTC
CCGGGCCTCGCGCGCCAGCTGTTCCGGTGGGCGGAGGCCACCCCGCGCGGCTTCCCGCGC
TGCGCCTCCGCGTACGCCGCCGTCCTCGTCCCGCTCGCCGAGGCCAAGCACCTCCACGCC
GCCCACCCCGTCTCCGTCCGCGCCATCCACCTCGGCCTTCTCCTCCCCCTTGTCTCCCTC
CTCCTCTCCTTTCCTACCACCGTCTCCCTCCACTACCTCCTCAACCTCCTCCTGCGCCTG
TCCACCAAGTTCAATACCCGAGCTCGCAACCCTGCGCCCTCCACCTGTTCGACGCTATGC
CTTGCCGCTTTCCGTGAGATGGCGCACCACGGAGTTCCCCCTTTCATCAAGGAATGCAAC
CTCGTGCTCCGTGCGCTGCGTGATGAAGCCAGGTGGGATGACATGCGCTCGGTGTATGCA
GAGATGCTTCAGCTTGGAATCGAGCCGAGCATTGTCACATACAACACGTTGTTGGATTCT
TTCTTCAGGGAGGGTAGGGTGGATCAGGCTGCCAAGTTGCTCAGAGAGATGGAGGCCCGG
CCTGGTGGATGCTTGCCGAGTGATGTCACATACAATGTGGTGATTAATGGGTTGGCCAGG
AAAGGTGAGCTGGAGAAGGCAGCTCAGCTGGTTGACAGAATGCGGATGTCCAAGAAGGCG
TCAGCTTTCACGTTTAATCCACTTATTACTGGGTATTTTGCAAGGGGTTCTGTTGAAAAG
GCTGGAGCATTGCAGTTGGAGATGGAGAATGAGGGCATTGTACCCACGGTGGTGACATAT
AACACAATTATTCATGGAATGTTTAGAAGTGGTAATGTGGAGGCAGCTCGGATGAAGTTT
GTGGAAATGAGAGCAATGGGATTACTTCCAGATTTGATTACATACAATTCTTTAATAAAT
GGGTATTGTAAGGCAGGGAATTTGAAGGAGGCACTTTGGTTATTTGGTGATTTGAAGCGT
GCGGGGTTAGCCCCATCAGTTTTGACATATAACATTCTTTTAGATGGTTATTGTAGATTA
GGTGATTTAGAGGAAGCTAGGAGATTCAAGCAGGAAATGGTAGAGCAGGGCTGTCAGCCT
GATGTTTCTACATACACGATTCTCATGAATGGGTCTCGTAAGGTGAGGAATCTTGCGATG
GTAAGAGAGTTCTTTGATGAAATGTTGAGCAAAGGTTTGCAGCCAGATTGCTTTGCCTAT
AATACAAGGATTTCTGCAGAGCTGATTCTAGGTTCTACTTCTGAGGCATTTCAGCTGACA
GAGGTGATGATTTCAAGAGGAATTTCTTCTGATACAGTAACATACAATATTTTCCTTGAT
GGATTGTGCAAATCTGGTAACTTGAAAGATGCCTATGTGTTGTGGATGAAGATGGTCAGT
GACGGTTTACAGCCTGACTGCATCACGTACACATGCTTGATTCACGCACATTGTGAAAGG
GGGCGTCTGAGAGAAGCAAGGGATATTTTTGATGGAATGCTTGTAAGTGGGTTGCCACCT
TCGGCTGTGACCTATACTGTTTTCATTCATGCATACTGTAGAAGAGGAAATCTTTACTCA
GCATATGGTTGGTTTCAAAAGATGCTGGAGGAAGGAGTGCGACCTAATGAAGTAACATAT
AATGTGCTCATACATGCACTTTGCAGGATGGGGAGAACTAACTTAGCTTATCAGCATTTT
CATGAGATGCTGGAAAGAGGATTGTCGCCAAACAAATACACGTACACTTTGCTGATTGAT
GGGAACTGTAAAGAAGGTAACTGGGAAGAGGCTATAAGGCTGTATTCTGAAATGCATCAG
CATGGTATCCATCCAGATCACTGCACACATAATGCCTTGTTTAAGGGATTTGATGAAGGC
CAGTCAAAACATGCAATTCAGTACATGGAGAATGTTGTTTTGGGTGCATAG

Peptide Sequence

PEP ID

Os12t0152600-01

PEP Infomation

pep chromosome:IRGSP-1.0:12:2592552:2594898:-1 gene:Os12g0152600 transcript:Os12t0152600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os12t0152600-01)

Sequence

MLFSIHPCKSQAPAASAAAAAISGLRFVSSSSSSSSTALIPPPRTEESPFASLLASDPPP
PEALREVLAAGDVHAALRGLPGLARQLFRWAEATPRGFPRCASAYAAVLVPLAEAKHLHA
AHPVSVRAIHLGLLLPLVSLLLSFPTTVSLHYLLNLLLRLSTKFNTRARNPAPSTCSTLC
LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS
FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA
SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF
VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRL
GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY
NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS
DGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYS
AYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLID
GNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQSKHAIQYMENVVLGA

Transcript Sequence

Transcript ID

Os12t0152600-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2592552:2594898:-1 gene:Os12g0152600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os12t0152600-01)

Sequence

ATCGAACTCCCTCCTCTCCCCTCCTCCTCCCCGCCGCCGGCGCCGCCTCCGCCCGCCGCC
GCAGCCATTCATGGCGAGGCGCCGCCGGGGAGGACTCGAACATTAACCCATGCTCTTCTC
CATCCACCCCTGCAAATCCCAAGCTCCTGCCGCATCCGCCGCCGCCGCCGCCATCTCCGG
CCTCCGCTTCGTCTCCTCGTCGTCGTCGTCGTCGTCGACGGCGCTGATTCCCCCGCCTCG
GACAGAGGAGAGCCCGTTCGCGTCGCTGCTCGCGTCTGATCCCCCACCACCCGAGGCGCT
CCGAGAGGTGCTCGCCGCTGGCGACGTCCACGCCGCGCTCCGCGGCCTCCCGGGCCTCGC
GCGCCAGCTGTTCCGGTGGGCGGAGGCCACCCCGCGCGGCTTCCCGCGCTGCGCCTCCGC
GTACGCCGCCGTCCTCGTCCCGCTCGCCGAGGCCAAGCACCTCCACGCCGCCCACCCCGT
CTCCGTCCGCGCCATCCACCTCGGCCTTCTCCTCCCCCTTGTCTCCCTCCTCCTCTCCTT
TCCTACCACCGTCTCCCTCCACTACCTCCTCAACCTCCTCCTGCGCCTGTCCACCAAGTT
CAATACCCGAGCTCGCAACCCTGCGCCCTCCACCTGTTCGACGCTATGCCTTGCCGCTTT
CCGTGAGATGGCGCACCACGGAGTTCCCCCTTTCATCAAGGAATGCAACCTCGTGCTCCG
TGCGCTGCGTGATGAAGCCAGGTGGGATGACATGCGCTCGGTGTATGCAGAGATGCTTCA
GCTTGGAATCGAGCCGAGCATTGTCACATACAACACGTTGTTGGATTCTTTCTTCAGGGA
GGGTAGGGTGGATCAGGCTGCCAAGTTGCTCAGAGAGATGGAGGCCCGGCCTGGTGGATG
CTTGCCGAGTGATGTCACATACAATGTGGTGATTAATGGGTTGGCCAGGAAAGGTGAGCT
GGAGAAGGCAGCTCAGCTGGTTGACAGAATGCGGATGTCCAAGAAGGCGTCAGCTTTCAC
GTTTAATCCACTTATTACTGGGTATTTTGCAAGGGGTTCTGTTGAAAAGGCTGGAGCATT
GCAGTTGGAGATGGAGAATGAGGGCATTGTACCCACGGTGGTGACATATAACACAATTAT
TCATGGAATGTTTAGAAGTGGTAATGTGGAGGCAGCTCGGATGAAGTTTGTGGAAATGAG
AGCAATGGGATTACTTCCAGATTTGATTACATACAATTCTTTAATAAATGGGTATTGTAA
GGCAGGGAATTTGAAGGAGGCACTTTGGTTATTTGGTGATTTGAAGCGTGCGGGGTTAGC
CCCATCAGTTTTGACATATAACATTCTTTTAGATGGTTATTGTAGATTAGGTGATTTAGA
GGAAGCTAGGAGATTCAAGCAGGAAATGGTAGAGCAGGGCTGTCAGCCTGATGTTTCTAC
ATACACGATTCTCATGAATGGGTCTCGTAAGGTGAGGAATCTTGCGATGGTAAGAGAGTT
CTTTGATGAAATGTTGAGCAAAGGTTTGCAGCCAGATTGCTTTGCCTATAATACAAGGAT
TTCTGCAGAGCTGATTCTAGGTTCTACTTCTGAGGCATTTCAGCTGACAGAGGTGATGAT
TTCAAGAGGAATTTCTTCTGATACAGTAACATACAATATTTTCCTTGATGGATTGTGCAA
ATCTGGTAACTTGAAAGATGCCTATGTGTTGTGGATGAAGATGGTCAGTGACGGTTTACA
GCCTGACTGCATCACGTACACATGCTTGATTCACGCACATTGTGAAAGGGGGCGTCTGAG
AGAAGCAAGGGATATTTTTGATGGAATGCTTGTAAGTGGGTTGCCACCTTCGGCTGTGAC
CTATACTGTTTTCATTCATGCATACTGTAGAAGAGGAAATCTTTACTCAGCATATGGTTG
GTTTCAAAAGATGCTGGAGGAAGGAGTGCGACCTAATGAAGTAACATATAATGTGCTCAT
ACATGCACTTTGCAGGATGGGGAGAACTAACTTAGCTTATCAGCATTTTCATGAGATGCT
GGAAAGAGGATTGTCGCCAAACAAATACACGTACACTTTGCTGATTGATGGGAACTGTAA
AGAAGGTAACTGGGAAGAGGCTATAAGGCTGTATTCTGAAATGCATCAGCATGGTATCCA
TCCAGATCACTGCACACATAATGCCTTGTTTAAGGGATTTGATGAAGGCCAGTCAAAACA
TGCAATTCAGTACATGGAGAATGTTGTTTTGGGTGCATAGACAGGTCCTTAAGAAAGATG
TACCGTGTGAACTTGTTTGGTGGAAATCCCTGTAAGGACATCCCATAAATGCATATTTCT
TTGCAAC