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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0152000-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:2565213:2566562:-1 gene:Os12g0152000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE TERMINAL FLOWER 1/CENTRORADIALIS HOMOLOG 3 description:Similar to Terminal flower 1-like protein. (Os12t0152000-00)
Sequence

ATGTCTAGGTCTGTGGAGCCTCTTGTTGTTGGGCGGGTGATCGGAGAAGTTATTGATTCA
TTCAACCCATGTACGAAGATGATAGTAACCTACAATTCAAACAAGCTTGTCTTTAATGGC
CATGAGTTCTACCCATCAGCAGTTGTATCTAAACCAAGAGTCGAGGTCCAAGGGGGTGAT
ATGCGTTCTTTCTTCACATTGGTTATGACAGACCCAGATGTGCCAGGACCAAGTGATCCA
TATCTAAGGGAACACCTACATTGGATTGTAACTGATATACCTGGAACAACGGATGCCTCT
TTTGGACGGGAAATCATAAGCTATGAGAGCCCAAAGCCCAGCATTGGTATCCACAGGTTC
GTTTTTGTGCTCTTCAAGCAGAAGCGTAGGCAGGCTGTAGTTGTGCCATCCTCTAGGGAT
CATTTCAATACACGCCAGTTTGCTGAGGAGAACGAACTTGGCCTTCCTGTCGCTGCTGTC
TACTTCAATGCTCAGAGAGAGACTGCTGCCAGGAGACGCTAA

Peptide Sequence

PEP ID

Os12t0152000-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:2565213:2566562:-1 gene:Os12g0152000 transcript:Os12t0152000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE TERMINAL FLOWER 1/CENTRORADIALIS HOMOLOG 3 description:Similar to Terminal flower 1-like protein. (Os12t0152000-00)
Sequence

MSRSVEPLVVGRVIGEVIDSFNPCTKMIVTYNSNKLVFNGHEFYPSAVVSKPRVEVQGGD
MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREIISYESPKPSIGIHRF
VFVLFKQKRRQAVVVPSSRDHFNTRQFAEENELGLPVAAVYFNAQRETAARRR

Transcript Sequence

Transcript ID

Os12t0152000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2565213:2566562:-1 gene:Os12g0152000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RICE TERMINAL FLOWER 1/CENTRORADIALIS HOMOLOG 3 description:Similar to Terminal flower 1-like protein. (Os12t0152000-00)
Sequence

AATAAGCAACCAAGGGCACATTGAAGTGCACTAGGTTTTGTCATTTACAACTAGCCAGAG
CACTAATTTCGGAAAATATAATTACCTGTCCCTCCAAGGCTCCAACCATGTCTAGGTCTG
TGGAGCCTCTTGTTGTTGGGCGGGTGATCGGAGAAGTTATTGATTCATTCAACCCATGTA
CGAAGATGATAGTAACCTACAATTCAAACAAGCTTGTCTTTAATGGCCATGAGTTCTACC
CATCAGCAGTTGTATCTAAACCAAGAGTCGAGGTCCAAGGGGGTGATATGCGTTCTTTCT
TCACATTGGTTATGACAGACCCAGATGTGCCAGGACCAAGTGATCCATATCTAAGGGAAC
ACCTACATTGGATTGTAACTGATATACCTGGAACAACGGATGCCTCTTTTGGACGGGAAA
TCATAAGCTATGAGAGCCCAAAGCCCAGCATTGGTATCCACAGGTTCGTTTTTGTGCTCT
TCAAGCAGAAGCGTAGGCAGGCTGTAGTTGTGCCATCCTCTAGGGATCATTTCAATACAC
GCCAGTTTGCTGAGGAGAACGAACTTGGCCTTCCTGTCGCTGCTGTCTACTTCAATGCTC
AGAGAGAGACTGCTGCCAGGAGACGCTAAAAAATTCCAGCTGTCATTATCCCCGCTGTGA
TAAATAAAAACCATCCAATAGTTTCTCCTGTCGTCTACATTATCTGCCACATCACTAGAT
TGTGGATCAAGGCTTCATCATTACGTCATTTGCCTCAAGAAAATCTACAATAAACCAAAT
GCATTTGACAGATTGTATCAGTGTCAGATTGTTTCCCGTATCAAAAATTAAGTAATGGAT
TGTTTTTGTAAGAAGATTGAGAGTCATGATAAATACCAGTGCATTCACATGCAAATATTA
GCAATCT