Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0151000-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:2535927:2538830:1 gene:Os12g0151000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 20B description:Similar to Purple acid phosphatase. (Os12t0151000-01)
Sequence

ATGGCAATGGCGAGCGTAGCAGCGTTGCGTCTCGTCGTCCTCCTCGCCGCCGCCGTGCCG
CTGCTGCCGCCGCCGGCGGCATCGCTGGCCGTGACGTCGACGTACGTGCGGCCGACGGCG
AGGGCGACGCTGTCCGTGCTCCACGACGGCGATGGCCGAACGCCGCAGCAGGTGCATATA
TCAGCTGTAGGCTCTGACAAGATGAGGGTGACGTGGATCACCGACGACGACGCGCCGGCC
ACCGTGGAGTACGGCACGGTCTCCGGCGAGTACCCATTCTCGGCGGCCGGAAACACCACC
ACCTACTCCTACGTCCTCTACCACTCCGGCAACATCCACGACGTCGTCATCGGCCCACTC
AAACCCAGCACCACCTACTTCTACCGCTGCAGCAACGACACGTCGCGCGAGCTCTCCTTC
CGTACGCCGCCGGCGAGCCTCCCGTTCAAGTTCGTCGTCGTCGGCGACCTCGGCCAGACG
GGGTGGACGGCGTCGACGCTGCGGCACGTCGCCGCCGACGTCTACGACATGCTGCTCCTC
CCCGGCGACCTGTCGTACGCCGACTTCTACCAGCCGCGGTGGGACACGTTCGGCCGCCTC
GTCGAGCCGCTGGCGAGCGCGCGGCCATGGATGGTGACGGAGGGCAACCACGAGGTGGAG
AGGATCCCGGTCATCCACCCGCGGCCGTTCACGGCGTACGACGCGCGGTGGCGCATGCCG
CACGACGCCGGCGCGTCGCCGTCGGGGTCCAACCTCTACTACTCCTTCGACGTCGCCGGC
GGCGCCGTGCACGTCGTCATGCTGGGGTCCTACGCCGGCTACGCCGCCGGCTCGGCGCAG
CACCGGTGGCTGCGGCGCGACCTCGCGGGGGTCGACCGCGCCAAGACGGCGTTCGTGGTG
GCGCTGGTGCACGCGCCGTGGTACAACAGCAACAGGGCGCACCGCGGCGAGGGCGACGCC
ATGCGCGCCGCCATGGAGGAGCTCCTCTACGGCGCCCGCGTCGACGCGGTGTTCGCCGGC
CACGTCCACGCGTACGAGAGGTTCGCGCGGGTGTACGGCGGCGGCGAGGACGCGTGCGGG
CCGGTGCACGTGACCGTCGGCGACGGCGGCAACCGGGAGGGGCTCGCCACGAGGTACGTC
GACCCGCAGCCGGCGGCGTCGGCGTTCAGGGAGGCGAGCTTCGGGCACGGCAGGCTGGAG
GTGGTGAACGCCACGCACGCGCTGTGGACGTGGCGGCGGAACGACGACGACGAGGCGGTG
GTCGCCGACGAGGTGTGGATCACCAGCCTCGCATCCAACCCGGCTTGCAACAAGAAGTAT
TCCATCAGCTTGTATTGA

Peptide Sequence

PEP ID

Os12t0151000-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:2535927:2538830:1 gene:Os12g0151000 transcript:Os12t0151000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 20B description:Similar to Purple acid phosphatase. (Os12t0151000-01)
Sequence

MAMASVAALRLVVLLAAAVPLLPPPAASLAVTSTYVRPTARATLSVLHDGDGRTPQQVHI
SAVGSDKMRVTWITDDDAPATVEYGTVSGEYPFSAAGNTTTYSYVLYHSGNIHDVVIGPL
KPSTTYFYRCSNDTSRELSFRTPPASLPFKFVVVGDLGQTGWTASTLRHVAADVYDMLLL
PGDLSYADFYQPRWDTFGRLVEPLASARPWMVTEGNHEVERIPVIHPRPFTAYDARWRMP
HDAGASPSGSNLYYSFDVAGGAVHVVMLGSYAGYAAGSAQHRWLRRDLAGVDRAKTAFVV
ALVHAPWYNSNRAHRGEGDAMRAAMEELLYGARVDAVFAGHVHAYERFARVYGGGEDACG
PVHVTVGDGGNREGLATRYVDPQPAASAFREASFGHGRLEVVNATHALWTWRRNDDDEAV
VADEVWITSLASNPACNKKYSISLY

Transcript Sequence

Transcript ID

Os12t0151000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2535927:2538830:1 gene:Os12g0151000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 20B description:Similar to Purple acid phosphatase. (Os12t0151000-01)
Sequence

AAGCTTGTCCAATATCGTCGACTGATCGATTTGGGCGAGAGACGACTTTTGTGAGCTTGT
GACCATATGGCAATGGCGAGCGTAGCAGCGTTGCGTCTCGTCGTCCTCCTCGCCGCCGCC
GTGCCGCTGCTGCCGCCGCCGGCGGCATCGCTGGCCGTGACGTCGACGTACGTGCGGCCG
ACGGCGAGGGCGACGCTGTCCGTGCTCCACGACGGCGATGGCCGAACGCCGCAGCAGGTG
CATATATCAGCTGTAGGCTCTGACAAGATGAGGGTGACGTGGATCACCGACGACGACGCG
CCGGCCACCGTGGAGTACGGCACGGTCTCCGGCGAGTACCCATTCTCGGCGGCCGGAAAC
ACCACCACCTACTCCTACGTCCTCTACCACTCCGGCAACATCCACGACGTCGTCATCGGC
CCACTCAAACCCAGCACCACCTACTTCTACCGCTGCAGCAACGACACGTCGCGCGAGCTC
TCCTTCCGTACGCCGCCGGCGAGCCTCCCGTTCAAGTTCGTCGTCGTCGGCGACCTCGGC
CAGACGGGGTGGACGGCGTCGACGCTGCGGCACGTCGCCGCCGACGTCTACGACATGCTG
CTCCTCCCCGGCGACCTGTCGTACGCCGACTTCTACCAGCCGCGGTGGGACACGTTCGGC
CGCCTCGTCGAGCCGCTGGCGAGCGCGCGGCCATGGATGGTGACGGAGGGCAACCACGAG
GTGGAGAGGATCCCGGTCATCCACCCGCGGCCGTTCACGGCGTACGACGCGCGGTGGCGC
ATGCCGCACGACGCCGGCGCGTCGCCGTCGGGGTCCAACCTCTACTACTCCTTCGACGTC
GCCGGCGGCGCCGTGCACGTCGTCATGCTGGGGTCCTACGCCGGCTACGCCGCCGGCTCG
GCGCAGCACCGGTGGCTGCGGCGCGACCTCGCGGGGGTCGACCGCGCCAAGACGGCGTTC
GTGGTGGCGCTGGTGCACGCGCCGTGGTACAACAGCAACAGGGCGCACCGCGGCGAGGGC
GACGCCATGCGCGCCGCCATGGAGGAGCTCCTCTACGGCGCCCGCGTCGACGCGGTGTTC
GCCGGCCACGTCCACGCGTACGAGAGGTTCGCGCGGGTGTACGGCGGCGGCGAGGACGCG
TGCGGGCCGGTGCACGTGACCGTCGGCGACGGCGGCAACCGGGAGGGGCTCGCCACGAGG
TACGTCGACCCGCAGCCGGCGGCGTCGGCGTTCAGGGAGGCGAGCTTCGGGCACGGCAGG
CTGGAGGTGGTGAACGCCACGCACGCGCTGTGGACGTGGCGGCGGAACGACGACGACGAG
GCGGTGGTCGCCGACGAGGTGTGGATCACCAGCCTCGCATCCAACCCGGCTTGCAACAAG
AAGTATTCCATCAGCTTGTATTGATGTGTGAGAAACTAGGATGACGATAGGTAGTGTGAT
TCTCTTGATGATTATACTACTTGATAAATCTCTCTCACATAAATTATATAGTATATGGTT
AATTTGT