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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0149800-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:2449184:2451494:1 gene:Os12g0149800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to G10. (Os12t0149800-01)
Sequence

ATGCCTAAGATAAAAACAAGTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCC
ACCCTCTCAGAGCTCCATTCCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGA
AGGAAGTGCGAGGCACTGTGGCCCATCTTCAAGATCAATCACCAGAGGAGCCGATATCTT
TATGACCTATACTACAACAGGAAGGAGATATCCCAGGAGTTGTATGAGTTCTGCCTTGAC
CAGGGACATGCTGACCGTAACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTC
TGCTGCCTGCGCTGTATCCAGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGG
GTTCCTAAGCACCTAAGGGAAGAACAGGTGATAGAGTGTGTCCACTGTGGTTGCAAAGGT
TGTGCTAGTGGTGACTAA

Peptide Sequence

PEP ID

Os12t0149800-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:2449184:2451494:1 gene:Os12g0149800 transcript:Os12t0149800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to G10. (Os12t0149800-01)
Sequence

MPKIKTSGVKYPDGWELIEPTLSELHSKMREAENDPHDGRRKCEALWPIFKINHQRSRYL
YDLYYNRKEISQELYEFCLDQGHADRNLIAKWKKQGYERLCCLRCIQTRDHNFATTCVCR
VPKHLREEQVIECVHCGCKGCASGD

Transcript Sequence

Transcript ID

Os12t0149800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2449184:2451494:1 gene:Os12g0149800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to G10. (Os12t0149800-01)
Sequence

GACCACTGCTTCCTCCCACCTGCGGAGACGGAACCCTAAAAAATTTCTTCTTCCCCTTCT
CGTCCGGGCAGCGGAAGGAGCTCTAAGCCAGAAGAAGCATCATGCCTAAGATAAAAACAA
GTGGTGTGAAATATCCCGATGGGTGGGAGCTTATAGAACCCACCCTCTCAGAGCTCCATT
CCAAGATGAGAGAAGCTGAGAATGATCCGCATGATGGGAGAAGGAAGTGCGAGGCACTGT
GGCCCATCTTCAAGATCAATCACCAGAGGAGCCGATATCTTTATGACCTATACTACAACA
GGAAGGAGATATCCCAGGAGTTGTATGAGTTCTGCCTTGACCAGGGACATGCTGACCGTA
ACCTCATCGCCAAATGGAAGAAGCAAGGCTATGAGCGTCTCTGCTGCCTGCGCTGTATCC
AGACACGAGACCACAACTTTGCGACCACCTGTGTTTGCAGGGTTCCTAAGCACCTAAGGG
AAGAACAGGTGATAGAGTGTGTCCACTGTGGTTGCAAAGGTTGTGCTAGTGGTGACTAAG
TATCCACTATTGGGATTACTTTTCAAGTTACATCAGGAGCAAGTTGATGAATGTAAACTG
AATAACTGATGTAGTGATATCTCTGATGTACTTGGAAAAATGCCTAGCCTGTCTAGAGAG
TAGACTGAATGTACTCGTAAGATGATGGATGTGGTAATGTGAAAAAAACTTGAGTTCTTC
TACC